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* gnu: Add watson.Sebastian Gibb2024-08-27
| | | | | | | * gnu/packages/task-management.scm (watson): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Change-Id: Ifc7671e6ec805e9e20e9f0c863c205a2848d4d61
* gnu: Add python-pytest-datafiles.Sebastian Gibb2024-08-27
| | | | | | * gnu/packages/python-check.scm (python-pytest-datafiles): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
* gnu: python-click-didyoumean: Enable tests.Sharlatan Hellseher2024-08-27
| | | | | | | | * gnu/packages/python-xyz.scm (python-click-didyoumean): Enable tests. [source]: Swap to git checkout containing tests. [native-inputs]: Add python-pytest. Change-Id: I741e52c92c1c1b5ccde557061a8be0010974610f
* gnu: python-click-didyoumean: Update to 0.3.1.Sharlatan Hellseher2024-08-27
| | | | | | | | | * gnu/packages/python-xyz.scm (python-click-didyoumean): Update to 0.3.1. [source]: Swap to a new PyPI packae name ("-" to "_"). [build-system]: Swap to pyproject-build-system. [native-inputs]: Add python-poetry-core. Change-Id: I24f2e632732c8204f816806c7ad067d327bb3d28
* gnu: Add emacs-comment-tags.Danny Milosavljevic2024-08-27
| | | | | | * gnu/packages/emacs-xyz.scm (emacs-comment-tags): New variable. Change-Id: I33986a415384523129a6a717cfa4b21091982a0c
* gnu: Add emacs-fortran-tags.Danny Milosavljevic2024-08-26
| | | | | | * gnu/packages/emacs-xyz.scm (emacs-fortran-tags): New variable. Change-Id: Id54e97e6fb0697861ee113e060a3fa38d5ca8143
* gnu: Add emacs-plz-event-source.Roman Scherer2024-08-26
| | | | | | | * gnu/packages/emacs-xyz.scm (emacs-plz-event-source): New variable. Change-Id: I66fc237fb191c0406fcf2d08c2938264e2dd9b95 Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
* gnu: Add emacs-plz-media-type.Roman Scherer2024-08-26
| | | | | | | * gnu/packages/emacs-xyz.scm (emacs-plz-media-type): New variable. Change-Id: Ib38d91e1cc642afd34b480967a34e0db0e28e4c6 Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
* gnu: Add emacs-composer.Rostislav Svoboda2024-08-26
| | | | | | | * gnu/packages/emacs-xyz.scm (emacs-composer): New variable. Change-Id: Iafd56804d00923adb9e377b55575bbd61e97b358 Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
* gnu: denemo: Use HTTPS home page URI.Nicolas Goaziou2024-08-26
| | | | | | * gnu/packages/music.scm (denemo)[home-page]: Use HTTPS URI. Change-Id: I07386a8153ed37041d270e52e482d0d1334e6ce5
* gnu: nauty: Fix build.Nicolas Goaziou2024-08-26
| | | | | | * gnu/packages/maths.scm (nauty): Fix hash. Change-Id: I4837baf2c43279705f0445fd08ad2578e431b8cc
* gnu: castor: Update to 0.9.0.Nicolas Goaziou2024-08-26
| | | | | | | | | * gnu/packages/web.scm (castor): Update to 0.9.0. [arguments]<#:phases>: Relax Cargo version requirements. <#:cargo-inputs>: Update rust-dirs to 3, rust-linkify to 0.7, and rust-textwrap to 0.14. Change-Id: I3508e35ab45315d394cb714e7ab3f7c508f2de14
* gnu: Add rust-textwrap-0.14.Nicolas Goaziou2024-08-26
| | | | | | * gnu/packages/crates-io.scm (rust-textwrap-0.14): New variable. Change-Id: I434bfa3008b05170bc41f2f54c4a7ad90a85cbf2
* gnu: Add rust-linkify-0.7.Nicolas Goaziou2024-08-26
| | | | | | * gnu/packages/crates-io.scm (rust-linkify-0.7): New variable. Change-Id: I2bec446d5923766c060eb855f1dbec4a0f46f862
* gnu: naev: Update to 0.11.5.Nicolas Goaziou2024-08-26
| | | | | | * gnu/packages/games.scm (naev): Update to 0.11.5. Change-Id: I201190f949ddae53d892e26b93d8577149345d7f
* gnu: du-dust: Fix ZSH completion.Tobias Geerinckx-Rice2024-08-18
| | | | | | * gnu/packages/admin.scm (du-dust)[arguments]: Fix typo. Change-Id: Id139b5e213981e9cf9bfe63f661f75404ccf9b50
* gnu: sugar-turtlepond-activity: Fix metadata.Tobias Geerinckx-Rice2024-08-18
| | | | | | | | | It was copied from sugar-commander-activity and never updated. * gnu/packages/sugar.scm (sugar-turtlepond-activity) [home-page, synopsis, description]: Describe sugar-turtlepond-activity. Change-Id: I551dcabd200e4e5059cf3a47d5e7231fc79e1490
* gnu: hexchat: Update to 2.16.2.Tobias Geerinckx-Rice2024-08-18
| | | | | | * gnu/packages/messaging.scm (hexchat): Update to 2.16.2. Change-Id: If27085b95bc865aa8367b8dde6f1bcf8cb90e940
* gnu: unrar-free: Update to 0.3.1.Tobias Geerinckx-Rice2024-08-18
| | | | | | | * gnu/packages/compression.scm (unrar-free): Update to 0.3.1. [native-inputs, inputs]: Remove input labels. Change-Id: Ifa0d54ca22819e8e65a8a3140c94bc9063905873
* gnu: nauty: Update to 2.8.9.Nicolas Goaziou2024-08-26
| | | | | | | * gnu/packages/maths.scm (nauty): Update to 2.8.9. [arguments]<#:phases>: Add a phase for fixing a test. Change-Id: I854754ab372ef6ae1d5e13e14c0fc8a667177b4d
* gnu: r-yulab-utils: Update to 0.1.7.Ricardo Wurmus2024-08-26
| | | | | | | * gnu/packages/cran.scm (r-yulab-utils): Update to 0.1.7. [propagated-inputs]: Remove r-httr2. Change-Id: Ib21bdcb122d4999cce48b71604042d4833285081
* gnu: r-sungeo: Update to 1.3.0.Ricardo Wurmus2024-08-26
| | | | | | | | | * gnu/packages/cran.scm (r-sungeo): Update to 1.3.0. [source]: Remove obsolete snippet. [propagated-inputs]: Remove r-sp; add r-rmapshaper. [native-inputs]: Add r-codetools. Change-Id: Iceca0e28314f31e326b7d7f8d4a03a71b770025f
* gnu: Add r-rmapshaper.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/cran.scm (r-rmapshaper): New variable. Change-Id: Iaef97544772fa75c143a2c68206e11a1533e385b
* gnu: Add r-geojsonsf.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/cran.scm (r-geojsonsf): New variable. Change-Id: I7ffac98fd2e59d3b65d62d38f7e1930647c64e9c
* gnu: Add r-sfheaders.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/cran.scm (r-sfheaders): New variable. Change-Id: Ia451593fb567ce9e88b5712a30f30ace2186edb2
* gnu: Add r-geometries.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/cran.scm (r-geometries): New variable. Change-Id: I290a5cc2bda00859d27c7a91341acb20708c9abc
* gnu: trealla: Update to 2.55.26.jgart2024-08-26
| | | | | | * gnu/packages/prolog.scm (trealla): Update to 2.55.26. Change-Id: I2a2652d2415d007fabf8974212cd35686336905f
* gnu: trealla: Update to 2.55.25.jgart2024-08-26
| | | | | | * gnu/packages/prolog.scm (trealla): Update to 2.55.25. Change-Id: I3c00edc6292c9e351ff514d3ca835236aa6c1d7e
* gnu: r-hmmcopy: Update to 1.46.0.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/bioconductor.scm (r-hmmcopy): Update to 1.46.0. Change-Id: I26c091fe4af549b01c98aac0a1fcdb058ff4ea71
* gnu: Add r-hmmcopy.Spencer King2024-08-26
| | | | | | | * gnu/packages/bioconductor.scm (r-hmmcopy): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Change-Id: Iface547e865609427c356277edc904f3aec386d8
* gnu: Add r-fuzzyjoin.Spencer King2024-08-26
| | | | | | | * gnu/pacakges/cran.scm (r-fuzzyjoin): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Change-Id: I47fd35ac4759c8c9cceaac32a5b78c2306404903
* gnu: r-omnipathr: Update to 3.12.3.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.12.3. Change-Id: I8ecd13d0d28003bb4ceb54b2c011fe6e8162df66
* gnu: r-bgeedb: Update to 2.30.1.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/bioconductor.scm (r-bgeedb): Update to 2.30.1. Change-Id: I31f54552b1e12315657f5bd9b8dbef32f3a20066
* gnu: r-universalmotif: Update to 1.22.2.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.22.2. Change-Id: I71e3f29a2ec4b15fb6758b4b972d17b5d1f502c8
* gnu: r-gdsfmt: Update to 1.40.1.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.40.1. Change-Id: Ib9f585e2e2ad6ebc883a626da2138caffc909613
* gnu: r-xcms: Update to 4.2.3.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/bioconductor.scm (r-xcms): Update to 4.2.3. Change-Id: I17355573c0af40aa8b021da3e46a99a9709b411b
* gnu: r-clusterprofiler: Update to 4.12.5.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.12.5. Change-Id: I05468212919db2e385cd4bd604891b7deca4110f
* gnu: r-dose: Update to 3.30.4.Ricardo Wurmus2024-08-26
| | | | | | | * gnu/packages/bioconductor.scm (r-dose): Update to 3.30.4. [propagated-inputs]: Remove r-hdo-db and r-yulab-utils. Change-Id: Ia8ed1de853bd80ad4c482667c1b3547b113410ae
* gnu: r-gosemsim: Update to 2.30.2.Ricardo Wurmus2024-08-26
| | | | | | | * gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.30.2. [propagated-inputs]: Add r-dbi, r-digest, r-httr2, and r-r-utils. Change-Id: Idb915ec70b79f7464011e94256f68e940d63764f
* gnu: r-ensembldb: Update to 2.28.1.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.28.1. Change-Id: I8d03eb64092c04e5a05f5371e1d3589a2efcd4f1
* gnu: r-dmrcate: Update to 3.0.8.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/bioconductor.scm (r-dmrcate): Update to 3.0.8. Change-Id: I62421e4df317cf33c08bdd4f65221c255d4c2dc7
* gnu: Add r-shinydisconnect.King, Spencer2024-08-26
| | | | | | | * gnu/packages/cran.scm (r-shinydisconnect): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Change-Id: Ibf90c8902b6e6e6c45b7bdb921f310f14ac6b803
* gnu: r-desctools: Update to 0.99.56.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/statistics.scm (r-desctools): Update to 0.99.56. Change-Id: I00956252d699c06408818cced7c0d04e409c61c7
* gnu: r-fdrtool: Update to 1.2.18.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/statistics.scm (r-fdrtool): Update to 1.2.18. Change-Id: I199c8f82b86c1b8cc40f5dffd6c55f1ff4b727e0
* gnu: r-rcppeigen: Update to 0.3.4.0.2.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.4.0.2. Change-Id: I3f9ddfdeb14da7bd42bd6e46389da2ec11dc9940
* gnu: r-minqa: Update to 1.2.8.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/statistics.scm (r-minqa): Update to 1.2.8. Change-Id: Ibdf083085acf888be22d807ea77f2b4caf28de44
* gnu: r-robust: Update to 0.7-5.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/statistics.scm (r-robust): Update to 0.7-5. Change-Id: I14ceb59373e95295b2bb90712258571226f76205
* gnu: r-rrcov: Update to 1.7-6.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/statistics.scm (r-rrcov): Update to 1.7-6. Change-Id: I21b0a480e840999d554dfce503a1e2e9137ea455
* gnu: r-pcapp: Update to 2.0-5.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/statistics.scm (r-pcapp): Update to 2.0-5. Change-Id: I4b4ee28b6777e41fc200e8bad748444b7a34f0e8
* gnu: r-robustbase: Update to 0.99-4.Ricardo Wurmus2024-08-26
| | | | | | * gnu/packages/statistics.scm (r-robustbase): Update to 0.99-4. Change-Id: I98104ac5700de8e50fcd8dcbcf0745845c809a9e
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