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* gnu: python-regions: Update to 0.10.Sharlatan Hellseher2024-10-30
| | | | | | | * gnu/packages/astronomy.scm (python-regions): Update to 0.10. [native-inputs]: Add python-setuptools. Change-Id: Ie5fb9464af8c00570afbb78392f917b6f6c978fe
* gnu: python-radio-beam: Update to 0.3.8.Sharlatan Hellseher2024-10-30
| | | | | | | | | * gnu/packages/astronomy.scm (python-radio-beam): Update to 0.3.8. [arguments] <#:tests>: Disable, as newer version of NumPy is required. [native-inputs]: Add python-setuptools and python-wheel. Place before 'propagated-inputs'. Change-Id: Idca5458b16a70b2ab07d0f30576e0f945b5f0ea0
* gnu: python-pyxsim: Update to 4.4.2.Sharlatan Hellseher2024-10-30
| | | | | | | * gnu/packages/astronomy.scm (python-pyxsim): Update to 4.4.2. [native-inputs]: Add python-setuptools and python-wheel. Change-Id: I37cb512dbe3f37aaf1ad9c4a4f2b31a9aec25519
* gnu: python-pyvo: Update to 1.5.3.Sharlatan Hellseher2024-10-30
| | | | | | | * gnu/packages/astronomy.scm (python-pyvo): Update to 1.5.3. [native-inputs]: Add python-setuptools and python-wheel. Change-Id: I75aac22869320c78cd036c3be1ffe6892469ee59
* gnu: python-pyregion: Update to 2.3.0.Sharlatan Hellseher2024-10-30
| | | | | | | | | * gnu/packages/astronomy.scm (python-pyregion): Update to 2.3.0. [arguments] <#:phases>: Add 'create-setup.py phase. [native-inputs]: Add python-extension-helpers, python-pytest-astropy, and python-setuptools. Change-Id: I4c114a5ec51a7dae2197f60579f1e63597c23ea7
* gnu: python-pynbody: Update to 1.6.0.post0.Sharlatan Hellseher2024-10-30
| | | | | | * gnu/packages/astronomy.scm (python-pynbody): Update to 1.6.0.post0. Change-Id: Ib05e972e13b823930bd644fce70475a3ad8aff96
* gnu: python-photutils: Update to 2.0.1.Sharlatan Hellseher2024-10-30
| | | | | | | | | * gnu/packages/astronomy.scm (python-photutils): Update to 2.0.1. [arguments]<#:phases>: Add 'relax-requirements phase. [propagated-inputs]: Remove python-scikit-learn; add python-regions. [native-inputs]: Add python-setuptools. Change-Id: If8533af300fdc695e9415d80806c5d88620921cb
* gnu: python-ndcube: Update to 2.2.3.Sharlatan Hellseher2024-10-30
| | | | | | | * gnu/packages/astronomy.scm (python-ndcube): Update to 2.2.3. [native-inputs]: Add python-setuptools and python-wheel. Change-Id: I1357dfd6cec1d191ba5d03a96023e35ad1e88177
* gnu: python-glymur: Update to 0.13.6.Sharlatan Hellseher2024-10-30
| | | | | | | | | * gnu/packages/python-xyz.scm (python-glymur): Update to 0.13.6. [phases]: Remove 'disable-failing-tests and move the logic to <#:tests-flags>. [native-inputs]: Add python-setuptools and python-wheel. Change-Id: Ied56e22d938b7cc61969892b680c9e72d1cfce1e
* gnu: python-ephem: Update to 4.1.6.Sharlatan Hellseher2024-10-30
| | | | | | * gnu/packages/astronomy.scm (python-ephem): Update to 4.1.6. Change-Id: I1a2f89d7ef5ec3289b92ce450a83d4c59f4457b5
* gnu: python-crds: Update to 12.0.4.Sharlatan Hellseher2024-10-30
| | | | | | | * gnu/packages/astronomy.scm (python-crds): Update to 12.0.4. [native-inputs]: Add python-setuptools and python-wheel. Change-Id: I9ceeca97a8d05a0c7f72ca61c03c8d2b9877f7fb
* gnu: python-astropy: Update to 6.1.4.Sharlatan Hellseher2024-10-30
| | | | | | * gnu/packages/astronomy.scm (python-astropy): Update to 6.1.4. Change-Id: I255426bf289d3e39dd2a39c40787b90e97452906
* gnu: python-astropy-iers-data: Update to 0.2024.10.14.0.32.55.Sharlatan Hellseher2024-10-30
| | | | | | | | | | * gnu/packages/astronomy.scm (python-astropy-iers-data): Update to 0.2024.10.14.0.32.55. [arguments] <#:tests?>: Adjust comments to reflect current status. <#:phases>: Remove 'set-env-version' phase. [native-inputs]: Add python-setuptools and python-wheel; remove python-pytest and python-pytest-remote-data. Change-Id: Ia22b52dc41405d73ed313e980f798ae725f47703
* gnu: python-astroalign: Update to 2.6.0.Sharlatan Hellseher2024-10-30
| | | | | | | | * gnu/packages/astronomy.scm (python-astroalign): Update to 2.6.0. [propagated-inputs]: Remove python-sep; add python-sep-pjw. [native-inputs]: Add python-setuptools. Change-Id: Ib233920b84d1c7110f2f0c3ecb82d2c68cb79a4c
* gnu: wcslib: Update to 8.3.Sharlatan Hellseher2024-10-30
| | | | | | * gnu/packages/astronomy.scm (wcslib): Update to 8.3. Change-Id: I200ac8887e47dafacd33e6b9168defb928e93c50
* gnu: stellarium: Update to 24.3.Sharlatan Hellseher2024-10-30
| | | | | | * gnu/packages/astronomy.scm (stellarium): Update to 24.3. Change-Id: Ife3a63c27360a6997b367e5d7fc011359d98395f
* gnu: siril: Update to 1.3.3.Sharlatan Hellseher2024-10-30
| | | | | | | | | * gnu/packages/astronomy.scm (siril): Update to 1.3.3. [inputs]: Add curl, ffmpeg, lcms-next, libgit2, libjxl, libxisf, lz4, pugixml, and wcslib. Sort alphabetically. [native-inputs]: Remove cmake; add cmake-minimal, and glib:bin. Change-Id: I3eaa0c1da7889d740850cac7c8860683e9b503a9
* gnu: Add lcms-next.Sharlatan Hellseher2024-10-30
| | | | | | * gnu/packages/ghostscript.scm (lcms-next): New variable. Change-Id: I45c8ce69f044e866654de43ffb7abb357ce1361f
* gnu: indi-2.0: Update to 2.1.0.Sharlatan Hellseher2024-10-30
| | | | | | * gnu/packages/astronomy.scm (indi-2.0): Update to 2.1.0. Change-Id: I7391d6ca6fb644baa4ad3c233e37e0713a88a31d
* gnu: calceph: Update to 4.0.1.Sharlatan Hellseher2024-10-30
| | | | | | * gnu/packages/astronomy.scm (calceph): Update to 4.0.1. Change-Id: Ic643270cea8bfb0d7af30412ad6bddd4a63cea41
* gnu: diffoscope: Update to 282.Vagrant Cascadian2024-10-30
| | | | | | * gnu/packages/diffoscope.scm (diffoscope): Update to 282. Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
* gnu: ugrep: Update to 7.0.2.Ashish SHUKLA2024-10-30
| | | | | | | * gnu/packages/search.scm (ugrep): Update to 7.0.2. Change-Id: Ia270e6be43c8154865ae965af60ff52ff81d00e2 Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
* gnu: icecat: Update to 115.17.0-guix1 [security fixes].Mark H Weaver2024-10-30
| | | | | | | Includes fixes for CVE-2024-10458, CVE-2024-10459, and CVE-2024-10463. * gnu/packages/gnuzilla.scm (%icecat-base-version, %icecat-build-id): Update. (icecat-source): Update gnuzilla commit, base version, and hashes.
* download: Remove defunct gnupg mirrors.Efraim Flashner2024-10-29
| | | | | | * guix/download.scm (%mirrors): Remove defunct gnupg mirrors. Change-Id: Ib6ecad007712e4efe5437709a6d2a2a0bfce6e97
* gnu: Add cl-wayflan.Grigory Shepelev2024-10-29
| | | | | | | | * gnu/packages/lisp-xyz.scm (cl-wayflan, sbcl-wayflan): New variables. Change-Id: I65982ad6f5c034f611292d4f660b15e4e42f8da0 Co-authored-by: Sharlatan Hellseher <sharlatanus@gmail.com> Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: Add cl-input-event-codes.Grigory Shepelev2024-10-29
| | | | | | | | | * gnu/packages/lisp-xyz.scm (cl-input-event-codes, ecl-cl-input-event-codes, sbcl-cl-input-event-codes): New variables. Change-Id: I47e65729f907e46d9deeb7dc0219ac9b1ba1a291 Co-authored-by: Sharlatan Hellseher <sharlatanus@gmail.com> Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: Add cl-pango.Grigory Shepelev2024-10-29
| | | | | | | | | * gnu/packages/lisp-xyz.scm (cl-pango, ecl-cl-pango, sbcl-cl-pango): New variables. Change-Id: I3615ef64197e8bee5cbb733bc427a54607bae4b2 Co-authored-by: Sharlatan Hellseher <sharlatanus@gmail.com> Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: Add cl-xkb.Grigory Shepelev2024-10-29
| | | | | | | | * gnu/packages/lisp-xyz.scm (cl-xkb, ecl-cl-xkb, sbcl-cl-xkb): New variables. Change-Id: Iaced3e5e084cc320a076ffb81d10fd9dde6be4de Co-authored-by: Sharlatan Hellseher <sharlatanus@gmail.com> Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: Add cl-posix-shm.Grigory Shepelev2024-10-29
| | | | | | | | * gnu/packages/lisp-xyz.scm (cl-posix-shm, sbcl-posix-shm): New variables. Change-Id: I5ac9a3751977bf98d817acd8b98d1a2ad9d393f7 Co-authored-by: Sharlatan Hellseher <sharlatanus@gmail.com> Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: Add cl-cacle.Roman Scherer2024-10-29
| | | | | | | * gnu/packages/lisp-xyz.scm (sbcl-cacle, cl-cacle, ecl-cacle): New variables. Change-Id: I67e6702d132fed017d86be82665e44021c1b081f Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: busybox: Fix build on non x86 platform.Zheng Junjie2024-10-29
| | | | | | | | * gnu/packages/patches/busybox-add-missing-sha-NI-guard.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/busybox.scm (busybox): Use it. Change-Id: I1e6a24dd5b86871a3479ab6ecd247b31c746ec75
* gnu: Add chow-tape-model.Ricardo Wurmus2024-10-28
| | | | | | | * gnu/packages/audio.scm (chow-tape-model): New variable. Reviewed-by: Ricardo Wurmus <rekado@elephly.net> Change-Id: I62b6b234c4fe62594f93d4da7ecff53d48a58cd8
* gnu: owl: Correct package.Andreas Enge2024-10-28
| | | | | | | | | | This is a follow-up to commit 3566cabecc0337f64b8a3e2ef276a93d99f440c7 which contains a preliminary version of the commit. * gnu/packages/scheme.scm (owl): Improve some fields. [native-inputs]: Drop pandoc. Change-Id: Iba99892b58ffa1c5267e3f7d80912fb1a964e2ed
* gnu: postgresql: Deprecate unsupported versions.Nicolas Graves2024-10-28
| | | | | | | | | | | | | | | | | | | Versions 10 and 11 are unsupported according to https://www.postgresql.org/support/versioning/ postgresql-10 also has a CVE. * doc/guix.texi: Change default value of postgresql-service-type's postgresql field. * gnu/packages/databases.scm (postresql-10, postgresql-11): Use define-deprecated/public to warn users. * gnu/services/databases.scm (postgresql-configuration): Change the default value of postgresql-configuration-postgresql. * gnu/tests/guix.scm (%guix-data-service-os): Change the default value of postgresql. Signed-off-by: Andreas Enge <andreas@enge.fr> Change-Id: Ie8744c8e1f246e9b45ff5e29d4e98214de3ca66a
* gnu: owl: Only build with pandoc on supported systems.Efraim Flashner2024-10-28
| | | | | | | * gnu/packages/scheme.scm (owl)[native-inputs]: Only use pandoc as an input on systems where pandoc is supported. Change-Id: I9a7727789d303b07834a689ce917d7ac88172212
* gnu: prrte: Record the absolute file name of ‘prted’.Ludovic Courtès2024-10-28
| | | | | | | | | | | | | | | | Previously a command like: guix shell --pure openmpi@5 openssh intel-mpi-benchmarks \ --with-input=openmpi@4=openmpi@5 slurm -- \ salloc -N2 -- mpirun -np 2 --map-by node IMB-MPI1 PingPong would silently fail due to ‘prted’ not being found in $PATH. * gnu/packages/parallel.scm (prrte)[arguments]: Add ‘patch-prted-reference’ phase. Change-Id: Iff30cb5a4dcc9e9cfe6638d518ee4f19561289a0 Signed-off-by: Andreas Enge <andreas@enge.fr>
* gnu: libtar: Patch CVEs. [security fixes]Nicolas Graves2024-10-28
| | | | | | | | | | | | | | This fixes CVE-2021-33643, CVE-2021-33644, CVE-2021-33645, CVE-2021-33646. * gnu/packages/compression.scm (libtar)[source]<patches>: Add patches here... * gnu/local.mk (dist_patch_DATA): ...and here. * gnu/packages/patches/libtar-CVE-2021-33643-CVE-2021-33644.patch, gnu/packages/patches/libtar-CVE-2021-33645-CVE-2021-33646.patch: New files. Signed-off-by: Andreas Enge <andreas@enge.fr> Change-Id: I60a6b753fddc1a0d08f96010ef3d57ec66c2251b
* gnu: Add owl.Juliana Sims2024-10-28
| | | | | | | * gnu/packages/scheme.scm (owl): New variable. Change-Id: Ibb242bbcdedb92419b59e05635e8a32e85afc24e Signed-off-by: Andreas Enge <andreas@enge.fr>
* gnu: gawk: Add search-paths.Efraim Flashner2024-10-28
| | | | | | * gnu/packages/gawk.scm (gawk)[search-paths]: New field. Change-Id: Idbf2709b793ebd58e1aae8d07698e1f3e816babd
* gnu: trealla: Update to 2.58.0.jgart2024-10-28
| | | | | | * gnu/packages/prolog.scm (trealla): Update to 2.58.0. Change-Id: Ibd2a982389a07c07523fa3a787f06e2013adcdfc
* gnu: Remove assimp-5.0.Nicolas Graves2024-10-28
| | | | | | | | This package is outdated, not used anymore in Guix and has a CVE. * gnu/packages/graphics.scm (assimp-5.0): Delete variable. Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
* gnu: sbcl-classimp: Update to 0.0.0-1.6c74f38.Nicolas Graves2024-10-28
| | | | | | | | | | | | * gnu/packages/lisp-xyz.scm (sbcl-classimp): Update to 0.0.0-1.6c74f38. [inputs]: Replace assimp-5.0 by assimp. [arguments]<#:phases>: Adapt phase 'patch-assimp-lib-path. (cl-classimp): Simplify. (ecl-classimp): Simplify. Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
* gnu: Add ghostwriter.Sughosha2024-10-28
| | | | | | | * gnu/packages/kde-office.scm (ghostwriter): New variable. Change-Id: I634e4ecab8c53aa67eb521f479d1acff6540c9fe Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
* gnu: Remove ghostwriter.Sughosha2024-10-28
| | | | | | | * gnu/packages/text-editors.scm (ghostwriter): Remove variable. Change-Id: I3bf4f80a232539bad72dec1110734408d5054453 Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
* gnu: Remove boinc-server.Vitalii Koshura2024-10-28
| | | | | | | | | | boinc-server is not supposed to be installed this (or any other) packaged way. Also, it uses a completely different versioning scheme. * gnu/packages/distributed.scm (boinc-server): Delete variable. Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn> Change-Id: I85c7176424c7db65eb5233bfefab01c62a0d757c
* gnu: bpftrace: Update to 1.21.2.Ashish SHUKLA2024-10-28
| | | | | | | * gnu/packages/linux.scm (bpftrace): Update to 1.21.2. [arguments]<#:phases> Rename, and update "patch-paths" phase. Change-Id: If7180d4da8073914172296f46a3427ccdff22478
* gnu: Add python-astropy-minimal.Sharlatan Hellseher2024-10-27
| | | | | | * gnu/packages/astronomy.scm (python-astropy-minimal): New variable. Change-Id: Iae90a9d988647b6f8f81c0ccb871c156ee6dfe1e
* gnu: Add emacs-anaconda-mode.Rostislav Svoboda2024-10-27
| | | | | | | * gnu/packages/emacs-xyz.scm (emacs-anaconda-mode): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Change-Id: I273c26cd66178d6f990bf0fca0432699c8bab202
* gnu: Add emacs-pythonic.Rostislav Svoboda2024-10-27
| | | | | | | * gnu/packages/emacs-xyz.scm (emacs-pythonic): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Change-Id: Ie8f1322fbf8230d4b5ca258cb7ccacee1daa231a
* gnu: emacs-org-ref: Update to 3.1-0.732a20b.Cayetano Santos2024-10-27
| | | | | | | | | | | | | | | | | The reason to exclude openalex.el from this package doesn't hold anymore, see <https://github.com/jkitchin/org-ref/issues/1085>. Emacs-helm is already pulled from emacs-helm-bibtex, no need to do it here. Emacs-request is a new hard dependency. Emacs-ivy is not. * gnu/packages/emacs-xyz.scm (emacs-org-ref): Update to 3.1-0.732a20b. [arguments]: Remove EMACS-HELM and EMACS-IVY. Add EMACS-REQUEST. Change-Id: I04f4cb9ffacaaf25a3e844c8e1d1b194e41d90a9 Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Change-Id: I510bf7b74520c0cf7c128b88cb02e975a6df898a
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