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* gnu: capnproto: Update to 0.7.0.update-capnproto-and-mashChristopher Baines2018-12-05
| | | | | * gnu/packages/serialization.scm (capnproto): Update to 0.7.0. [arguments]: Add new 'use-tmp-for-tempory-files phase.
* gnu: mash: Use C++ 14.Christopher Baines2018-12-05
| | | | | | | | | | | I'm looking to upgrade capnproto, and mash fails to build with 0.7. Therefore, tweak the compilation to allow it to build with 0.7. The package also builds with the current version of capnproto. I got the idea of changing the c++ version from here [1]. 1: https://github.com/marbl/Mash/issues/98 * gnu/packages/bioinformatics.scm (mash)[arguments]: Add new use-c++14 phase.
* gnu: Syncthing: Update to 0.14.54.Leo Famulari2018-12-05
| | | | * gnu/packages/syncthing.scm (syncthing): Update to 0.14.54.
* gnu: filezilla: Update to 3.39.0.Rene2018-12-05
| | | | * gnu/packages/ftp.scm (filezilla): Update to 3.39.0.
* gnu: libfilezilla: Update to 0.15.1.Rene2018-12-05
| | | | | * gnu/packages/ftp.scm (libfilezilla): Update to 0.15.1. [inputs]: Add nettle.
* gnu: balsa: Update to 2.5.6.Rene2018-12-05
| | | | | * gnu/packages/mail.scm (balsa): Update to 2.5.6. [source]: Update URI.
* gnu: pdfgrep: Update to 2.1.2.Rene2018-12-05
| | | | * gnu/packages/pdf.scm (pdfgrep): Update to 2.1.2.
* doc: Fix typoLaura Lazzati2018-12-05
| | | | | | * doc/guix.texi (Invoking guix system): Fix typo. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: eyeD3: Update to 0.8.8.Leo Famulari2018-12-05
| | | | * gnu/packages/mp3.scm (eyed3): Update to 0.8.8.
* gnu: beets: Make it compatible with Python 3.7.Danny Milosavljevic2018-12-05
| | | | | * gnu/packages/music.scm (beets)[arguments]<#:phases> [make-python3.7-compatible]: New phase.
* gnu: khal: Disable another test.Leo Famulari2018-12-05
| | | | | | | | Normally we shouldn't disable tests just because they fail. However, since the recent glibc update, it's not possible to keep using an old khal, because khal requires locales to be set up properly. * gnu/packages/calendar.scm (khal)[arguments]: Disable a failing test.
* gnu: sbcl-stumpwm: Drop ECL lisp support and rename to 'stumpwm'.Pierre Langlois2018-12-05
| | | | | | | | | | | | | | | | | | | StumpWM version 1.0.0 was the last version to support lisps other than SBCL. This patch renames the current version of Stumpwm to simply 'stumpwm' instead of 'sbcl-stumpwm' since it's redundant, and removes the unmaintained 'ecl-stumpwm' package. * gnu/packages/lisp.scm (sbcl-stumpwm): Deprecate in favor of 'stumpwm'. [name]: Rename to 'stumpwm'. [arguments]: Set '#:asd-system-name' to 'stumpwm'. [properties]: Replace ecl-variant with cl-source-variant. (ecl-stumpwm): Remove variable. (cl-stumpwm): Replace 'sbcl-stumpwm' with 'stumpwm' and adapt. (sbcl-stumpwm+slynk): Deprecate in favor of 'stumpwm+slynk'. [name]: Rename to 'stumpwm-with-slynk'. [inherit, inputs, arguments]: Replace 'sbcl-stumpwm' with 'stumpwm'. Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
* gnu: go-github-com-client-golang-prometheus: Update to 0.9.1-0.7e9098b.Leo Famulari2018-12-04
| | | | | | * gnu/packages/syncthing.scm (go-github-com-client-golang-prometheus): Update to 0.9.1-0.7e9098b. [arguments]: Skip the test suite.
* gnu: go-github-com-syncthing-notify: Update to 0.0.0-3.116c45b.Leo Famulari2018-12-04
| | | | * gnu/packages/syncthing (go-github-com-syncthing-notify): Update to 0.0.0-3.116c45b.
* gnu: Syncthing: Update to 0.14.53.Leo Famulari2018-12-04
| | | | | | | * gnu/packages/syncthing.scm (syncthing): Update to 0.14.53. [source]: Use bundled libraries. [inputs]: Remove field. [arguments]: Simplify the 'build' phase.
* gnu: Add python-xmltodict.Oleg Pykhalov2018-12-05
| | | | * gnu/packages/xml.scm (python-xmltodict): New variable.
* gnu: sbcl-next: Update to 1.1.0.Pierre Neidhardt2018-12-05
| | | | * gnu/packages/web-browsers.scm (sbcl-next): Update to 1.1.0.
* gnu: next-gtk-webkit: Update to 1.1.0.Pierre Neidhardt2018-12-05
| | | | * gnu/packages/web-browsers.scm (next-gtk-webkit): Update to 1.1.0.
* gnu: mongo-tools: Fix build.Christopher Baines2018-12-04
| | | | | | | I guess this broke when upgrading go. I did try upgrading to the later patch and minor releases, but they had similar problems, so lets upgrade separately. * gnu/packages/databases.scm (mongo-tools)[arguments]: Add patch-source phase.
* gnu: mbedtls-apache: Update to 2.14.1 [fixes CVE-2018-19608].Marius Bakke2018-12-04
| | | | * gnu/packages/tls.scm (mbedtls-apache): Update to 2.14.1.
* gnu: samba.scm: Sort module imports.Marius Bakke2018-12-04
| | | | * gnu/packages/samba.scm (gnu): Sort imports.
* gnu: ldb: Update to 1.4.3.Marius Bakke2018-12-04
| | | | | * gnu/packages/samba.scm (ldb): Update to 1.4.3. [inputs]: Add LMDB.
* gnu: samba: Update to 4.9.3.Marius Bakke2018-12-04
| | | | | * gnu/packages/samba.scm (samba): Update to 4.9.3. [inputs]: Add GPGME, JANSSON, LIBARCHIVE and LMDB.
* gnu: re2: Update to 2018-12-01.Marius Bakke2018-12-04
| | | | * gnu/packages/regex.scm (re2): Update to 2018-12-01.
* gnu: re2: Download sources from git.Marius Bakke2018-12-04
| | | | * gnu/packages/regex.scm (re2)[source]: Change to GIT-FETCH.
* gnu: python-django: Update to 1.11.17.Marius Bakke2018-12-04
| | | | * gnu/packages/django.scm (python-django): Update to 1.11.17.
* gnu: go-gopkg.in-tomb.v2: Fix build.Christopher Baines2018-12-04
| | | | | | | | Looks like this test isn't compiling with newer versions of go, so fix it to get the package building again. * gnu/packages/golang.scm (go-gopkg.in-tomb.v2)[arguments]: Add new patch-source phase.
* gnu: Add apertium.Arun Isaac2018-12-04
| | | | * gnu/packages/dictionaries.scm (apertium): New variable.
* gnu: Add lttoolbox.Arun Isaac2018-12-04
| | | | * gnu/packages/dictionaries.scm (lttoolbox): New variable.
* gnu: dictionaries: Use license prefix.Arun Isaac2018-12-04
| | | | | * gnu/packages/dictionaries.scm: Import (guix licenses) with license: prefix. Fix all license fields.
* gnu: pigx-rnaseq: Update to 0.0.5.Ricardo Wurmus2018-12-04
| | | | | * gnu/packages/bioinformatics.scm (pigx-rnaseq): Update to 0.0.5. [inputs]: Replace snakemake-4 with snakemake.
* gnu: pari-gp: Update to 2.11.1.Andreas Enge2018-12-04
| | | | * gnu/packages/algebra.scm (pari-gp): Update to 2.11.1.
* gnu: emacs-irony-mode: Fetch source using git.Tim Gesthuizen2018-12-04
| | | | | | * gnu/packages/emacs.scm (emacs-irony-mode)[source]: Rewrite in terms of GIT-FETCH. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: enlightenment: Use absolute path to 'edje_cc'.Timo Eisenmann2018-12-04
| | | | | | | * gnu/packages/enlightenment.scm (enlightenment)[arguments]: In 'set-system-actions', set absolute file name to 'edje_cc'. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: fenics: Skip extra demo in 'check' phase.Paul Garlick2018-12-04
| | | | | | | * gnu/packages/simulation.scm (fenics)[arguments]: Add 'curl-curl' demo to list of demos that require meshes supplied by git-lfs. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: petsc-openmpi: Configure with support for HYPRE preconditioner.Paul Garlick2018-12-04
| | | | | | | * gnu/packages/maths.scm (petsc-openmpi)[inputs]: Add hypre-openmpi. [arguments]: Add 'with-hypre=1' flag. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* grafts: Mark as non substitutable.Ludovic Courtès2018-12-04
| | | | | * guix/grafts.scm (graft-derivation/shallow): Pass #:substitutable? to 'build-expression->derivation'.
* refresh: '--list-dependents' ignores deprecated packages.Ludovic Courtès2018-12-04
| | | | * guix/scripts/refresh.scm (all-packages): Filter out deprecated packages.
* build: Default to https://ci.guix.info for substitutes.Ludovic Courtès2018-12-04
| | | | | | | | | * config-daemon.ac (guix_substitute_urls): Always default to "https://ci.guix.info". * doc/guix.texi (SUBSTITUTE-SERVER): Switch to ci.guix.info. * guix/scripts/build.scm (%default-log-urls): Likewise. * guix/scripts/substitute.scm (%default-substitute-urls): Likewise. * guix/store.scm (%default-substitute-urls): Likewise.
* Remove most references to hydra.gnu.org.Ludovic Courtès2018-12-04
| | | | | | | | | | | | | | | * Makefile.am (assert-binaries-available): Don't mention hydra.gnu.org in comment. * build-aux/check-available-binaries.scm: Likewise. * build-aux/check-final-inputs-self-contained.scm: Likewise. * doc/guix.texi (SUBSTITUTE-SERVER): New variable. Use it throughout instead of "mirror.hydra.gnu.org". * doc/contributing.texi (Submitting Patches): Likewise. * gnu/services/base.scm (hydra-key-authorization) (guix-activation): Remove mentions of "hydra.gnu.org" in comments and messages. * gnu/system/install.scm (%installation-services): Likewise. * guix/scripts/size.scm (guix-size): Likewise.
* etc: Add "ci.guix.info.pub" public key file.Ludovic Courtès2018-12-04
| | | | | | | * etc/substitutes/ci.guix.info.pub: New file. * Makefile.am (dist_pkgdata_DATA): Add it. * guix/self.scm (miscellaneous-files): Add "share/guix/ci.guix.info.pub".
* gnu: dolphin-emu: Update to commit 2c57e70.Rutger Helling2018-12-04
| | | | * gnu/packages/emulators.scm (dolphin-emu): Update to commit 2c57e70.
* services: ddclient: Fix unrecognized keywords.Oleg Pykhalov2018-12-04
| | | | | | This patch fixes warnings about unrecognized keywords in logs. * gnu/services/dns.scm (serialize-field): Skip some field names.
* gnu: Beets: Update to 1.4.7.Leo Famulari2018-12-03
| | | | * gnu/packages/music.scm (beets): Update to 1.4.7.
* gnu: python-unidecode: Update to 1.0.23.Leo Famulari2018-12-03
| | | | | * gnu/packages/python.scm (python-unidecode, python2-unidecode): Update to 1.0.23.
* gnu: Beets: Fix compatibility with Python 3.7.Leo Famulari2018-12-03
| | | | | | * gnu/packages/patches/beets-python-3.7-fix.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/music.scm (beets)[source]: Use it.
* gnu: Add hnsd.Ludovic Courtès2018-12-03
| | | | | | Thank you, Handshake! * gnu/packages/dns.scm (hnsd): New variable.
* nls: Update 'fr' translation.Julien Lepiller2018-12-03
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* gnu: python-cryptography: Update to 2.4.2.Marius Bakke2018-12-03
| | | | | * gnu/packages/python-crypto.scm (python-cryptography-vectors, python-cryptography): Update to 2.4.2.
* gnu: python-statsmodels: Update to 0.9.0.Marius Bakke2018-12-03
| | | | | * gnu/packages/statistics.scm (python-statsmodels): Update to 0.9.0. [arguments]: Remove obsolete workaround.
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