diff options
Diffstat (limited to 'gnu/packages/cran.scm')
| -rw-r--r-- | gnu/packages/cran.scm | 466 |
1 files changed, 275 insertions, 191 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 612524e2f7..e161088613 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -460,14 +460,14 @@ etc.") (define-public r-datawizard (package (name "r-datawizard") - (version "0.8.0") + (version "0.9.0") (source (origin (method url-fetch) (uri (cran-uri "datawizard" version)) (sha256 (base32 - "18i27mmf3z8a3wa49k8jjcs17nd0h4gmmjybbnaihyqm6r7yv8qk")))) + "1w1d18ssd6nbwg2r9gs0779wf33vpl8xivlc79ci5mi4db2m7zsd")))) (properties `((upstream-name . "datawizard"))) (build-system r-build-system) (propagated-inputs @@ -800,13 +800,13 @@ text annotations.") (define-public r-ggstatsplot (package (name "r-ggstatsplot") - (version "0.12.0") + (version "0.12.1") (source (origin (method url-fetch) (uri (cran-uri "ggstatsplot" version)) (sha256 (base32 - "17jxvzr4dlvsakrsvblxngg60jxh0c1a0i8phqqg63nbf79ng2lk")))) + "0w24dbz2zc60zpxp2bylj6yk8rwdrkbppkykmip1wrhsbi8663xi")))) (properties `((upstream-name . "ggstatsplot"))) (build-system r-build-system) (propagated-inputs (list r-correlation @@ -976,13 +976,13 @@ repositories, replacing the need for installation via @code{devtools}.") (define-public r-gunifrac (package (name "r-gunifrac") - (version "1.7") + (version "1.8") (source (origin (method url-fetch) (uri (cran-uri "GUniFrac" version)) (sha256 (base32 - "13qb5fw9km6p5x8li9x3liqbh833wf2v73npj8jl3msplzfk82vp")))) + "1yw0d8hb7s662xy0dny9ygvx9gwh7yj8dxw4897zy7zyjhzim95f")))) (properties `((upstream-name . "GUniFrac"))) (build-system r-build-system) (propagated-inputs @@ -991,6 +991,7 @@ repositories, replacing the need for installation via @code{devtools}.") r-foreach r-ggplot2 r-ggrepel + r-inline r-mass r-matrix r-matrixstats @@ -3408,6 +3409,41 @@ convenience functions useful for using CSS selectors on XML nodes. This package is a port of the Python package @code{cssselect}.") (license license:bsd-3))) +(define-public r-repmis + (package + (name "r-repmis") + (version "0.5") + (source + (origin + (method url-fetch) + (uri (cran-uri "repmis" version)) + (sha256 + (base32 "0z5mjbsl24yjbl0aawr35grcal44rf2xbwv1hy7bdkms94ix79b5")))) + (properties `((upstream-name . "repmis"))) + (build-system r-build-system) + (arguments + (list + #:phases + '(modify-phases %standard-phases + (add-before 'install 'change-home-dir + (lambda _ + ;; Change from /homeless-shelter to /tmp for write permission. + (setenv "HOME" "/tmp")))))) + (propagated-inputs + (list r-data-table + r-digest + r-httr + r-plyr + r-r-cache)) + (home-page "https://cran.r-project.org/package=repmis") + (synopsis "Miscellaneous tools for reproducible research") + (description + "This package is a colletion of tools to load R packages and +automatically generate BibTeX files citing them as well as load and cache +plain-text and Excel formatted data stored on GitHub, and from other +sources.") + (license license:gpl3+))) + (define-public r-reprex (package (name "r-reprex") @@ -3797,13 +3833,13 @@ of the problems that API wrapping packages face.") (define-public r-jade (package (name "r-jade") - (version "2.0-3") + (version "2.0-4") (source (origin (method url-fetch) (uri (cran-uri "JADE" version)) (sha256 (base32 - "1fj2wawx5ac1fvlp28naqha0i17f1sb47j2qqzgccvx17ycqmmjn")))) + "0m90rnhr5vkdv1xswr5c0j06ngzvmg73nd0kmg9m9r6a6ddddcyl")))) (properties `((upstream-name . "JADE"))) (build-system r-build-system) (propagated-inputs (list r-clue)) @@ -3990,13 +4026,13 @@ LaTeX.") (define-public r-curl (package (name "r-curl") - (version "5.0.2") + (version "5.1.0") (source (origin (method url-fetch) (uri (cran-uri "curl" version)) (sha256 (base32 - "0wkwdlnc9v10hip0a1zka9gik9nb67yanbqvsy0cidrfk4x3fsqn")))) + "15xsxirb5k4pqc8v5kg0i3v1pnhy4wzcljxagp703gc59fl8s8ap")))) (properties `((upstream-name . "curl") (updater-extra-inputs . ("curl")))) @@ -4237,13 +4273,13 @@ jQuery.") (define-public r-jqr (package (name "r-jqr") - (version "1.2.3") + (version "1.3.0") (source (origin (method url-fetch) (uri (cran-uri "jqr" version)) (sha256 (base32 - "1a91zcjxdilhqdyr2lipnwc35f90h0wyqlbg0vw9ay7sq6llxgs9")))) + "0gys1b2fiafmm49mkj9iazziwql87s52rjx093ahn8g3v79amirh")))) (properties `((upstream-name . "jqr"))) (build-system r-build-system) (inputs (list jq)) @@ -4555,7 +4591,7 @@ previewing themes in real time.") (inputs (list js-datatables js-selectize js-strftime js-highlight)) (native-inputs - `(("uglifyjs" ,node-uglify-js) + `(("esbuild" ,esbuild) ("gfortran" ,gfortran) ("js-bootstrap-accessibility" ,(origin @@ -4756,14 +4792,14 @@ Bootstrap themes, which are packaged for use with Shiny applications.") (define-public r-d3r (package (name "r-d3r") - (version "1.0.1") + (version "1.1.0") (source (origin (method url-fetch) (uri (cran-uri "d3r" version)) (sha256 (base32 - "07n92x047l6savy8s5r3rj15nmjgswl1shl1dyzrzhgpa5jrpxf3")) + "1dcm53y3jpyswr6y368xhdnn1nkchixf4wkxnsb2mk9lzccb44y4")) (snippet '(for-each delete-file '("inst/www/d3/v3/dist/d3.min.js" @@ -4802,7 +4838,7 @@ Bootstrap themes, which are packaged for use with Shiny applications.") (string-append "--outfile=" target))) sources targets))))))))) (propagated-inputs - (list r-dplyr r-htmltools r-rlang r-tidyr)) + (list r-dplyr r-htmltools r-tidyr)) (native-inputs `(("esbuild" ,esbuild) ("d3.v3.js" @@ -5288,13 +5324,13 @@ coordinates.") (define-public r-gensa (package (name "r-gensa") - (version "1.1.9") + (version "1.1.10.1") (source (origin (method url-fetch) (uri (cran-uri "GenSA" version)) (sha256 (base32 - "10qm0467r2rbcck1w7dijng5j676314vsyxsr0p8l843xz7s66rq")))) + "16wla8k6ibxy58hhn7qd02k96lc7j6skaj6g5ap6lqmm854ki4wh")))) (properties `((upstream-name . "GenSA"))) (build-system r-build-system) (home-page "https://cran.r-project.org/package=GenSA") @@ -5775,14 +5811,14 @@ is configured appropriately so R can use them.") (define-public r-pkgload (package (name "r-pkgload") - (version "1.3.2.1") + (version "1.3.3") (source (origin (method url-fetch) (uri (cran-uri "pkgload" version)) (sha256 (base32 - "1ckl6cqjk93n91p1i42hza6dciygsc25mibdif89vnyb7w97p651")))) + "0nb9h61l57cb7yzmsmh5q650zdd7nda6cmnd6m5cqyb4hwi832dh")))) (build-system r-build-system) (propagated-inputs (list r-cli @@ -5790,6 +5826,7 @@ is configured appropriately so R can use them.") r-desc r-fs r-glue + r-pkgbuild r-rlang r-rprojroot r-withr)) @@ -6155,13 +6192,13 @@ graphics packages that comes with the base installation.") (define-public r-ctrdata (package (name "r-ctrdata") - (version "1.15.1") + (version "1.15.2") (source (origin (method url-fetch) (uri (cran-uri "ctrdata" version)) (sha256 (base32 - "1yzn7cxsxbldnfhk83kw8p9qv0154lf2207qvlgjhpc6lzka4lic")))) + "0rqsz9wq4w0w2q0vha3dh7rwr3mnhp2gc1xb8hi30qk85zghjzml")))) (properties `((upstream-name . "ctrdata"))) (build-system r-build-system) (propagated-inputs @@ -6461,14 +6498,14 @@ statistical functions and other utilities to ease their usage.") (define-public r-prettyunits (package (name "r-prettyunits") - (version "1.1.1") + (version "1.2.0") (source (origin (method url-fetch) (uri (cran-uri "prettyunits" version)) (sha256 (base32 - "1ibmzgknw5896q2i6r59jz2izblxwgb29ivvjzx50pkd1jl9l6cs")))) + "1smcxrfsz6cxym9h8iaiqrrw5bzp2bbpmf05zr8y70jw59zg4ngh")))) (build-system r-build-system) (home-page "https://github.com/gaborcsardi/prettyunits") (synopsis "Pretty, human readable formatting of quantities") @@ -6653,13 +6690,13 @@ most popular ones.") (define-public r-sp (package (name "r-sp") - (version "2.0-0") + (version "2.1-0") (source (origin (method url-fetch) (uri (cran-uri "sp" version)) (sha256 - (base32 "1wc8bwfqalpbsicgdrfkvmg3lm65nghf35m2g8fh4q9hr5gxpy09")))) + (base32 "03041jp74z7l5vs1yzp145w331940kj9gf52jaxdninknikhc0vk")))) (build-system r-build-system) (propagated-inputs (list r-lattice)) @@ -6714,13 +6751,13 @@ do-it-yourself toolkit allows users to define their own Lambert W x (define-public r-lamw (package (name "r-lamw") - (version "2.2.0") + (version "2.2.1") (source (origin (method url-fetch) (uri (cran-uri "lamW" version)) (sha256 (base32 - "0xa05375swa49n579ljwscsgqfi7ivcfzc4smwfw8k1anym0pmg9")))) + "1lz8iv6r07lrc9bghdmq5y8bfmlr1hdk1j02ghvmz3d7s3d9p0hz")))) (properties `((upstream-name . "lamW"))) (build-system r-build-system) (propagated-inputs (list r-rcpp r-rcppparallel)) @@ -7164,14 +7201,14 @@ transportation problems.") (define-public r-limsolve (package (name "r-limsolve") - (version "1.5.6") + (version "1.5.7") (source (origin (method url-fetch) (uri (cran-uri "limSolve" version)) (sha256 (base32 - "1829rd2cnd8qj80z9a7sgc7gx4sf3kvl5g6d2a0lqqw30f9sjzmr")))) + "1waqkkipks8h4h5lpn0xw0077hwpz963q42h7xv6f70p07zncxq4")))) (properties `((upstream-name . "limSolve"))) (build-system r-build-system) (propagated-inputs @@ -7696,14 +7733,14 @@ dimensioned arrays.") (define-public r-rmysql (package (name "r-rmysql") - (version "0.10.25") + (version "0.10.26") (source (origin (method url-fetch) (uri (cran-uri "RMySQL" version)) (sha256 (base32 - "1527ba5vqg4ss6rqxrkxa1a66r1m9h4zmdnv9xdzva8fv2dhy4zd")))) + "0yk3xyj6fwyms4ii80m304xn0zbhayfmrhd1b0x7s7wblch5pfs5")))) (properties `((upstream-name . "RMySQL"))) (build-system r-build-system) (inputs @@ -7958,14 +7995,14 @@ problems as well as resampling based estimators of prediction error.") (define-public r-psych (package (name "r-psych") - (version "2.3.6") + (version "2.3.9") (source (origin (method url-fetch) (uri (cran-uri "psych" version)) (sha256 (base32 - "1z5h2hs56fw54dsvpi3sl463l31yn0qjvk779wdb7w175gwmr6db")))) + "1c8r42yv7x1vjxz8j2hvkii6jxapffiib2s5vvlsm4hp2qffihh4")))) (build-system r-build-system) (propagated-inputs (list r-lattice r-mnormt r-nlme)) @@ -9344,6 +9381,40 @@ of merit, ordering functions, and enhanced versions of @code{pairs} and @code{parcoord} which color panels according to their merit level.") (license license:gpl2+))) +(define-public r-webchem + (package + (name "r-webchem") + (version "1.3.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "webchem" version)) + (sha256 + (base32 "06b9i9jipg564zyw4gkgiidz7501rlp40hxm4z3k5mzy148lr5vq")))) + (properties `((upstream-name . "webchem"))) + (build-system r-build-system) + (propagated-inputs (list r-base64enc + r-data-tree + r-dplyr + r-httr + r-jsonlite + r-purrr + r-rlang + r-rvest + r-stringr + r-tibble + r-xml2)) + (native-inputs (list r-knitr)) + (home-page "https://docs.ropensci.org/webchem/") + (synopsis "Chemical information from the web") + (description + "This package interacts with a suite of web services for chemical +information. Sources include: Alan Wood's Compendium of Pesticide Common +Names, Chemical Identifier Resolver, ChEBI, Chemical Translation Service, +ChemSpider, ETOX, Flavornet, NIST Chemistry WebBook, OPSIN, PubChem, SRS, +Wikidata.") + (license license:expat))) + (define-public r-webshot (package (name "r-webshot") @@ -9619,14 +9690,14 @@ their own grammars and easily expose them in R packages.") (define-public r-tinytex (package (name "r-tinytex") - (version "0.46") + (version "0.47") (source (origin (method url-fetch) (uri (cran-uri "tinytex" version)) (sha256 (base32 - "00q21bx3vgsxqdfk372cxdcvfmbza2yplzfhr1hd5mad4f4qx30b")))) + "1py5i4h2vpicl79ypxw061p9byxvj703z1rh8l2shfpq7wqwhxbr")))) (build-system r-build-system) (propagated-inputs (list r-xfun)) @@ -10765,14 +10836,14 @@ and @dfn{alternating direction method of multipliers algorithms} (ADMM).") (define-public r-import (package (name "r-import") - (version "1.3.0") + (version "1.3.1") (source (origin (method url-fetch) (uri (cran-uri "import" version)) (sha256 (base32 - "19g4jnfg9pkvvsncw62yc15xlb97hfbdqxivpjd9jqi36i6mdjrg")))) + "1h7km8751flxf70112r31wp10vhk4v1jr4avyb969ln317pf8yjq")))) (build-system r-build-system) (native-inputs (list r-knitr)) @@ -11661,23 +11732,26 @@ dependency on Java.") (define-public r-rio (package (name "r-rio") - (version "0.5.30") + (version "1.0.1") (source (origin (method url-fetch) (uri (cran-uri "rio" version)) (sha256 (base32 - "0ihpdwixzkpm3qqh7iy6xm9mmvka2hx50qdidhxnav72nx5b31w0")))) + "1vkvajlmp8kgmkadamy0xm885whfkwacq2jxcrshz1w8amy16k3m")))) (build-system r-build-system) (propagated-inputs (list r-curl r-data-table r-foreign r-haven - r-openxlsx + r-lifecycle + r-r-utils r-readxl - r-tibble)) + r-stringi + r-tibble + r-writexl)) (native-inputs (list r-knitr)) (home-page "https://github.com/leeper/rio") @@ -12232,14 +12306,14 @@ those searches and pull data into their R sessions.") (define-public r-renv (package (name "r-renv") - (version "1.0.2") + (version "1.0.3") (source (origin (method url-fetch) (uri (cran-uri "renv" version)) (sha256 (base32 - "1kl5ckcpj38w8xqq8jqjg050hcc2ill114x4qp4v5zk32sw49aap")))) + "1d2y1yks34dg862zcxx03dak1h2gikis6mabmws2srja2hr18nlq")))) (properties `((upstream-name . "renv"))) (build-system r-build-system) (native-inputs @@ -12258,16 +12332,16 @@ reproducible.") (define-public r-learnr (package (name "r-learnr") - (version "0.11.4") + (version "0.11.5") (source (origin (method url-fetch) (uri (cran-uri "learnr" version)) (sha256 (base32 - "1m2m2sm8yx2b64y7xqlzx7v1bf8x8sci0miaka6frpd6rn4bsr7f")))) + "01xig6ijsjnkwdjh03zdp86mqm5pjlqp9br34pn644rf98qg8k2y")))) (build-system r-build-system) - (native-inputs (list r-knitr)) + (native-inputs (list esbuild r-knitr)) (propagated-inputs (list r-checkmate r-digest @@ -12416,13 +12490,13 @@ file.") (define-public r-billboarder (package (name "r-billboarder") - (version "0.4.0") + (version "0.4.1") (source (origin (method url-fetch) (uri (cran-uri "billboarder" version)) (sha256 - (base32 "1llac7fyyfax6q8n9b8lccyl9c8vxqvkfp341sz59mrw8yhwb2hr")) + (base32 "0byj1ilwnmq9n9gswsnj17r8pzhm4fp6567nbz1xfmlvl3402qkn")) (snippet '(delete-file "inst/htmlwidgets/lib/billboard/billboard.pkgd.min.js")))) (properties `((upstream-name . "billboarder"))) @@ -12888,25 +12962,24 @@ univariate polynomial manipulations.") (define-public r-pupillometryr (package (name "r-pupillometryr") - (version "0.0.4") + (version "0.0.5") (source (origin (method url-fetch) (uri (cran-uri "PupillometryR" version)) (sha256 - (base32 "0yk30sgl2qqa6pva649swq523vh446ifmydildycfvfmlm1h4qza")))) + (base32 "0jqpx5g0fjdxxp7wlgv4jm5vrhchm6r21qd7i825fi5552c46awv")))) (properties `((upstream-name . "PupillometryR"))) (build-system r-build-system) (propagated-inputs - (list r-data-table - r-dplyr + (list r-dplyr r-fda r-ggplot2 r-itsadug - r-lazyeval r-mgcv r-rlang r-signal + r-stringr r-tidyr r-zoo)) (native-inputs (list r-knitr)) @@ -13252,14 +13325,14 @@ Decomposition in R (Beaton et al 2014) <doi:10.1016/j.csda.2013.11.006>.") (define-public r-insight (package (name "r-insight") - (version "0.19.4") + (version "0.19.5") (source (origin (method url-fetch) (uri (cran-uri "insight" version)) (sha256 (base32 - "1v9555c4rrq91gkpy995f4p6gzcmw7xir73pvi70jwy81agc99g1")))) + "0794p9dbclj1d7fcka6sqm8jzqsc58hxmmsksd3hmzv0qz49yhkg")))) (build-system r-build-system) (native-inputs (list r-knitr)) @@ -13338,13 +13411,13 @@ tidyverse workflow.") (define-public r-nodbi (package (name "r-nodbi") - (version "0.9.6") + (version "0.9.8") (source (origin (method url-fetch) (uri (cran-uri "nodbi" version)) (sha256 (base32 - "0adhj5r7zbqqrhf64g8vrsyq1k1ia86jgr825ny8l5m3dkcgxv1l")))) + "1ypwxy560pgn5zza1fv6ip0wh1y872lrf7a1blk2lvwf1q38dlkr")))) (properties `((upstream-name . "nodbi"))) (build-system r-build-system) (propagated-inputs @@ -13595,14 +13668,14 @@ Venn diagram, heatmap).") (define-public r-getopt (package (name "r-getopt") - (version "1.20.3") + (version "1.20.4") (source (origin (method url-fetch) (uri (cran-uri "getopt" version)) (sha256 (base32 - "0zzmzgwl9a4y3s34600vmih22d6y32294f9bvxrnmffnvkgmy7sk")))) + "12qy48adnibfi9rpv5qd8k3hipbc4q85514dsz0xnhdsdnz6rlw7")))) (build-system r-build-system) (home-page "https://github.com/trevorld/getopt") (synopsis "Command-line option processor for R") @@ -13731,14 +13804,14 @@ the work.") (define-public r-doby (package (name "r-doby") - (version "4.6.18") + (version "4.6.19") (source (origin (method url-fetch) (uri (cran-uri "doBy" version)) (sha256 (base32 - "19g60s7d8a444mg24b50bs56fvwbwjv44fylvib2q1c6rjx3wxrz")))) + "14hvbhf9zamqkjhr9jd8zjpm9xlc8hwqj04gy6ln32n2hzqqqr6v")))) (properties `((upstream-name . "doBy"))) (build-system r-build-system) (propagated-inputs @@ -13864,14 +13937,14 @@ bootstrap. Confidence intervals can be computed for (p)AUC or ROC curves.") (define-public r-rootsolve (package (name "r-rootsolve") - (version "1.8.2.3") + (version "1.8.2.4") (source (origin (method url-fetch) (uri (cran-uri "rootSolve" version)) (sha256 (base32 - "182bb727sgqi5f3pzmw8jnn328wdjrgj9lfvg49gv8s22rjd3cxm")))) + "0p9qmn82bg0ks9hmh2dkygnzhxcnp5z8z8b8aq52w6clliz32sp1")))) (properties `((upstream-name . "rootSolve"))) (build-system r-build-system) (native-inputs (list gfortran)) @@ -14252,13 +14325,13 @@ ABC algorithms.") (define-public r-abctools (package (name "r-abctools") - (version "1.1.6") + (version "1.1.7") (source (origin (method url-fetch) (uri (cran-uri "abctools" version)) (sha256 - (base32 "0yxmj28ym8919l27m04yjyc7mya1iy5ap4p980grsh7m4cgpx3bh")))) + (base32 "16gn5hk25glbjml7bclxqkybi90gqjijz6hl6ak8aig5wm08pgx2")))) (build-system r-build-system) (propagated-inputs (list r-abc r-abind r-hmisc r-plyr)) @@ -14432,14 +14505,16 @@ both to consistency and asymptotic normality.") (properties `((upstream-name . "doFuture"))) (build-system r-build-system) (arguments - '(#:phases - (modify-phases %standard-phases + (list + #:phases + '(modify-phases %standard-phases (add-after 'unpack 'set-HOME (lambda _ (setenv "HOME" "/tmp")))))) (propagated-inputs (list r-foreach r-future r-future-apply r-globals r-iterators)) (native-inputs - (list r-r-rsp)) ; vignette builder + (list r-markdown ;check phase requires markdown package + r-r-rsp)) ;vignette builder (home-page "https://github.com/HenrikBengtsson/doFuture") (synopsis "Foreach parallel adapter using the future API") (description @@ -15252,14 +15327,14 @@ samples is large and the number of mixture components is not too large.") (define-public r-magick (package (name "r-magick") - (version "2.7.5") + (version "2.8.0") (source (origin (method url-fetch) (uri (cran-uri "magick" version)) (sha256 (base32 - "18lxzszpd4x2l150wm762xh24zblrin3w734dkhis7mp74niddk9")))) + "1al1apw9vgdl6ccm4nnpqpnya0pi2cfp62xii7dwnv7pd47m8fp8")))) (properties '((updater-extra-inputs . ("imagemagick")))) (build-system r-build-system) @@ -15366,21 +15441,18 @@ handle data from simple random samples as well as complex surveys.") (define-public r-tarchetypes (package (name "r-tarchetypes") - (version "0.7.8") + (version "0.7.9") (source (origin (method url-fetch) (uri (cran-uri "tarchetypes" version)) (sha256 (base32 - "1m43f2c2rrwnmsbhzfl97fvgjnfm4xwip09saia0dmp84lml26n1")))) + "1889jca7zwav1wwig1a4jr1dxmbcszfriqmhdyg97m2s1c9j0r9p")))) (properties `((upstream-name . "tarchetypes"))) (build-system r-build-system) (propagated-inputs (list r-digest r-dplyr r-fs - r-furrr - r-future - r-future-callr r-rlang r-targets r-tibble @@ -15893,13 +15965,13 @@ Cohen (1988).") (define-public r-libcoin (package (name "r-libcoin") - (version "1.0-9") + (version "1.0-10") (source (origin (method url-fetch) (uri (cran-uri "libcoin" version)) (sha256 - (base32 "1syrcdj5qg5m3zd3dlxgpfklswbalfg42w058dr09hnzqsvx0z9d")))) + (base32 "1bvysrq2s3951vr5ab1jzbz4hyx5j04yzh04vxdpd287bm4y08rh")))) (build-system r-build-system) (propagated-inputs (list r-mvtnorm)) (home-page "https://cran.r-project.org/web/packages/libcoin") @@ -15912,14 +15984,14 @@ and permutation inference in the framework of Strasser and Weber (1999).") (define-public r-coin (package (name "r-coin") - (version "1.4-2") + (version "1.4-3") (source (origin (method url-fetch) (uri (cran-uri "coin" version)) (sha256 (base32 - "1cpv7jx840inzg98bkhrb5yscx0gpag6br237r5qpnc2gbrd2ikm")))) + "0x5rh002w4xgczbvnh7qfv3qv4iv7p6vdrwwyvchqmzgygdh4qwa")))) (build-system r-build-system) (arguments (list @@ -16168,14 +16240,14 @@ results using @code{ggplot2}.") (define-public r-effectsize (package (name "r-effectsize") - (version "0.8.5") + (version "0.8.6") (source (origin (method url-fetch) (uri (cran-uri "effectsize" version)) (sha256 (base32 - "01iv9rc1ssa69ziy4z7kldwab5754vamgymf2zannss9g65dl7ri")))) + "0gdk6f2713k2vhv7qa6dgxl6kgc6r6yb12hb27k4bbibj5njvvni")))) (properties `((upstream-name . "effectsize"))) (build-system r-build-system) (propagated-inputs @@ -16442,14 +16514,14 @@ user credentials.") (define-public r-gert (package (name "r-gert") - (version "1.9.3") + (version "2.0.0") (source (origin (method url-fetch) (uri (cran-uri "gert" version)) (sha256 (base32 - "09v8dv1yazgc7g1yi3h5x5hrljix9kaiadbhsd1cvannp5pj7332")))) + "14b3bppid65jpzxrc7ddvvyr2qafv08z75v19rvfiv7780vpq53w")))) (properties `((upstream-name . "gert"))) (build-system r-build-system) (inputs @@ -17030,14 +17102,14 @@ parallel calculations across cluster nodes.") (define-public r-chk (package (name "r-chk") - (version "0.9.0") + (version "0.9.1") (source (origin (method url-fetch) (uri (cran-uri "chk" version)) (sha256 (base32 - "1fj9rqvxv0s2j5sikmkn18280w4194kx5hlkah9z0hr4vnzgkrh7")))) + "19q5ylkgrkdmnzg2df1lnrp2arbfzwfz4rbrr16j9ih2237kvd7r")))) (properties `((upstream-name . "chk"))) (build-system r-build-system) (propagated-inputs @@ -17079,13 +17151,13 @@ address a bug.") (define-public r-rcppalgos (package (name "r-rcppalgos") - (version "2.8.1") + (version "2.8.2") (source (origin (method url-fetch) (uri (cran-uri "RcppAlgos" version)) (sha256 (base32 - "0fqmjrb7l9jzdk0v851536fyhz2fhq1ai1nkx38n1shrw0j13cy3")))) + "1h9kgr8776q7dvc0a2cylixhvk0xw3fq6lpyf15xajbbypxy9bzz")))) (properties `((upstream-name . "RcppAlgos"))) (build-system r-build-system) (inputs (list gmp)) @@ -17136,14 +17208,14 @@ This package provides an R interface.") (define-public r-rcpphnsw (package (name "r-rcpphnsw") - (version "0.4.1") + (version "0.5.0") (source (origin (method url-fetch) (uri (cran-uri "RcppHNSW" version)) (sha256 (base32 - "0x3w14cz6hkrl8hi6217j0dl65l3yphbzka1dmsvgp3p9waq402g")))) + "0sb9g41lk2f7fj0hpg9qvyp6gbvwlcjpi9gxs3lh3xxfzrnap5w9")))) (properties `((upstream-name . "RcppHNSW"))) (build-system r-build-system) (propagated-inputs (list r-rcpp)) @@ -17515,14 +17587,14 @@ Scientific.") (define-public r-activity (package (name "r-activity") - (version "1.3.3") + (version "1.3.4") (source (origin (method url-fetch) (uri (cran-uri "activity" version)) (sha256 (base32 - "056dnhwc781ykgsmm2jaqxd15bckdxhbvxws6gjcrkvn4yimwgmh")))) + "10gp2yvqxz5ysmh5z8qvrpli8kc2kn2z3nd2llfabpyh21476in2")))) (build-system r-build-system) (propagated-inputs (list r-pbapply)) @@ -17758,14 +17830,14 @@ classification.") (define-public r-sodium (package (name "r-sodium") - (version "1.2.1") + (version "1.3.0") (source (origin (method url-fetch) (uri (cran-uri "sodium" version)) (sha256 (base32 - "1a03z2asvmalnmsn89lapzp8a4fr0qvzdv3xgin8pbqhjyb9hvpp")))) + "0b10cbzpybbjwhrbdx2ldjg8gb3cgzra533x6rn3d52zy1sqs6l8")))) (properties `((upstream-name . "sodium"))) (build-system r-build-system) (inputs @@ -17933,21 +18005,27 @@ Processing.") (define-public r-waffle (package (name "r-waffle") - (version "0.7.0") + (version "1.0.2") (source (origin (method url-fetch) (uri (cran-uri "waffle" version)) (sha256 (base32 - "1qjmai33p96cyavi9lgi6k30h6fj7db5sr569v9jf4kwx92c61df")))) + "17z05mlnp2k9dywr0bbqz633sq1xs8q9879bl2na1in39qxq0l76")))) (properties `((upstream-name . "waffle"))) (build-system r-build-system) (propagated-inputs - (list r-extrafont + (list r-curl + r-dt + r-extrafont r-ggplot2 r-gridextra r-gtable - r-rcolorbrewer)) + r-htmlwidgets + r-plyr + r-rcolorbrewer + r-rlang + r-stringr)) (home-page "https://github.com/hrbrmstr/waffle/tree/cran") (synopsis "Creating waffle chart visualizations in R") (description @@ -18276,13 +18354,13 @@ while other are highly specific for the special data format used for (define-public r-qmri (package (name "r-qmri") - (version "1.2.6") + (version "1.2.7") (source (origin (method url-fetch) (uri (cran-uri "qMRI" version)) (sha256 (base32 - "1laslvp1h6xh73lbxvjysznazafcbl7bz0pw4h85n6mp3gsnlvcj")))) + "0jiwvnhmm4zwqydqkzsygwkm23nc0zzjz5w7yckwdfc5zafch4hk")))) (properties `((upstream-name . "qMRI"))) (build-system r-build-system) (propagated-inputs (list r-adimpro r-aws r-awsmethods r-oro-nifti @@ -18751,13 +18829,13 @@ handling.") (define-public r-gridpattern (package (name "r-gridpattern") - (version "1.0.2") + (version "1.1.0") (source (origin (method url-fetch) (uri (cran-uri "gridpattern" version)) (sha256 - (base32 "13yypjsbpr61yn15y4cyz6s8jvcgg3mmr8rncskinpk8lsa8h2h4")))) + (base32 "19g8mnc5y68w9pybckmcvr56qkwbs5z9z6zhj0bxmlprwanq4f8x")))) (properties `((upstream-name . "gridpattern"))) (build-system r-build-system) (propagated-inputs @@ -18901,14 +18979,14 @@ the combination of non-negative and non-positive constraints.") (define-public r-iso (package (name "r-iso") - (version "0.0-18.1") + (version "0.0-21") (source (origin (method url-fetch) (uri (cran-uri "Iso" version)) (sha256 (base32 - "0vy6jdyvp751430sf2f690yhasjr70cpk3p3lnaaxjq3fs5gg99g")))) + "19lgwbfbca30mh3hhnarzab5cvnrwnr0pxam6fvfnadnqzhjm15n")))) (properties `((upstream-name . "Iso"))) (build-system r-build-system) (native-inputs (list gfortran)) @@ -20813,13 +20891,13 @@ identifying outliers.") (define-public r-bayesm (package (name "r-bayesm") - (version "3.1-5") + (version "3.1-6") (source (origin (method url-fetch) (uri (cran-uri "bayesm" version)) (sha256 - (base32 "18j7h32nq4hx1qnxfgfgz3q39q35lmvsq3im90xjkphyli60f8zj")))) + (base32 "1d9wp7yr5hadyv48f51xqa5yzfnhh01n813sivwla209vjf2pmqp")))) (build-system r-build-system) (propagated-inputs (list r-rcpp r-rcpparmadillo)) @@ -21528,14 +21606,14 @@ network.") (define-public r-apcluster (package (name "r-apcluster") - (version "1.4.10") + (version "1.4.11") (source (origin (method url-fetch) (uri (cran-uri "apcluster" version)) (sha256 (base32 - "1820j1xjlbmw6j2fwwv2g806dqpk5qrbbaqsrbrn6igql8pzf552")))) + "0crk7skivcmlvr0njsbd8dksj5wa6qlvdp99ay5b2b40cs3xm5s4")))) (build-system r-build-system) (propagated-inputs (list r-matrix r-rcpp)) @@ -21960,14 +22038,14 @@ utilities for sequence data management under the ACNUC system.") (define-public r-units (package (name "r-units") - (version "0.8-3") + (version "0.8-4") (source (origin (method url-fetch) (uri (cran-uri "units" version)) (sha256 (base32 - "1a27cymlr99cjsy3pl294vvyagp80i0j2lzxx04nmk7d5vh7bhgq")))) + "1z672lsyrbm8mjv6ni8pa0cxixf9vi249281ym1ayrv13s4s37a9")))) (build-system r-build-system) (inputs (list udunits)) @@ -22807,13 +22885,13 @@ that accept short and long options.") (define-public r-osqp (package (name "r-osqp") - (version "0.6.0.8") + (version "0.6.3.1") (source (origin (method url-fetch) (uri (cran-uri "osqp" version)) (sha256 (base32 - "15zd0byk8vy899hm7kd0hpx84hnr84ynai29mr7frraamr2l00ql")))) + "178vvv0yajjy02ww4brrjb4197dp7c0n8zmk1zwh44h9msnnacj3")))) (properties `((upstream-name . "osqp"))) (build-system r-build-system) (propagated-inputs (list r-matrix r-r6 r-rcpp)) @@ -23246,18 +23324,18 @@ package.") (define-public r-yulab-utils (package (name "r-yulab-utils") - (version "0.0.9") + (version "0.1.0") (source (origin (method url-fetch) (uri (cran-uri "yulab.utils" version)) (sha256 (base32 - "0y8594xmsg59p7pgz9bnjdc0bi50y6nmzvvzmjk8wyn4v5rz09ln")))) + "045s3xg723a8m9cqql74ifqir5k6zl4csdq39vw5im2zgvyajkzg")))) (properties `((upstream-name . "yulab.utils"))) (build-system r-build-system) (propagated-inputs - (list r-memoise r-rlang)) + (list r-cli r-digest r-fs r-memoise r-rlang)) (home-page "https://cran.r-project.org/package=yulab.utils") (synopsis "Supporting functions for packages maintained by YuLab-SMU") (description @@ -23351,14 +23429,14 @@ color.") (define-public r-polyclip (package (name "r-polyclip") - (version "1.10-4") + (version "1.10-6") (source (origin (method url-fetch) (uri (cran-uri "polyclip" version)) (sha256 (base32 - "0mkg5v045an49c3j279vvabm7p4d9jsnzlfp96dpblvihxvwkll4")))) + "0qwb5w1ishbhg1nhdp8985ddvcs7ljdyrbv059hx576xmgni6brw")))) (build-system r-build-system) (native-inputs (list pkg-config)) (home-page "http://www.angusj.com/delphi/clipper.php") @@ -23488,14 +23566,14 @@ range of inputs and can be visualized in numerous ways.") (define-public r-europepmc (package (name "r-europepmc") - (version "0.4.2") + (version "0.4.3") (source (origin (method url-fetch) (uri (cran-uri "europepmc" version)) (sha256 (base32 - "0p04gi06iwdcsj6abh7pwdghc8fs9sf2abd8vwr550c9879g1x5w")))) + "160rvp4yl5myccasyzaq8qhgxwv858y1wdwyrmnrmn3va8s5b515")))) (build-system r-build-system) (propagated-inputs (list r-dplyr @@ -23922,18 +24000,18 @@ function for computing a matrix of correlation p-values.") (define-public r-ggfun (package (name "r-ggfun") - (version "0.1.2") + (version "0.1.3") (source (origin (method url-fetch) (uri (cran-uri "ggfun" version)) (sha256 (base32 - "1dzrcm03hy4lyll9jh2r4bn19yvkdim6ip0dmwzc4vqbs5hcvd6b")))) + "1jk94qridy587dnw3j97k73wa02vs3vcfrjgrri35kvv7fkjw8w9")))) (properties `((upstream-name . "ggfun"))) (build-system r-build-system) (propagated-inputs - (list r-ggplot2 r-rlang)) + (list r-cli r-ggplot2 r-rlang)) (native-inputs (list r-knitr)) (home-page "https://cran.r-project.org/package=ggfun") (synopsis "Miscellaneous functions for ggplot2") @@ -24260,14 +24338,14 @@ external dependencies. This package has is implemented purely in R.") (define-public r-aplot (package (name "r-aplot") - (version "0.2.0") + (version "0.2.2") (source (origin (method url-fetch) (uri (cran-uri "aplot" version)) (sha256 (base32 - "1431c6hx812bz013zqbgj5zg4ilpakfpi691wlcwybri75sxxdv0")))) + "094bzrcjybs2dk2plmxf80mbx9dz1hi5m7gp8bbs5qqh03xn7wf7")))) (properties `((upstream-name . "aplot"))) (build-system r-build-system) (propagated-inputs @@ -24331,14 +24409,14 @@ colored by the number of neighboring points. This is useful to visualize the (define-public r-arrow (package (name "r-arrow") - (version "13.0.0") + (version "13.0.0.1") (source (origin (method url-fetch) (uri (cran-uri "arrow" version)) (sha256 (base32 - "0s29xw9r9hxyvcgdasw95qa7q8zvs79ffhfnlpnzsvb523d2cb6l")))) + "1h08zx7hvmsib7mi8yn0pk0y2bqqn5scr804ln0g30jwvcjx7w56")))) (properties `((upstream-name . "arrow"))) (build-system r-build-system) (inputs @@ -24686,14 +24764,14 @@ from SuiteSparse.") (define-public r-sctransform (package (name "r-sctransform") - (version "0.3.5") + (version "0.4.0") (source (origin (method url-fetch) (uri (cran-uri "sctransform" version)) (sha256 (base32 - "02vfgv6v3knmn5nxadjyjkzqmni1sgaf3f9ywm7d0knn0pgmd3n0")))) + "1cxlqscjn33rszigk7bxjj2hdsr8rxalq94fg86qwmx9jv0i1vws")))) (build-system r-build-system) (propagated-inputs (list r-dplyr @@ -24858,14 +24936,14 @@ experiments in a well-organized and reproducible way.") (define-public r-clue (package (name "r-clue") - (version "0.3-64") + (version "0.3-65") (source (origin (method url-fetch) (uri (cran-uri "clue" version)) (sha256 (base32 - "1br8vsjcfrklspk24cx2zpk05l0na18ajbkwkwmwmpc79jlbfp7l")))) + "1y1ycb5yw034ccxz15x41ah699hgjffsfvbn15fwdcdjbz9zvy5x")))) (build-system r-build-system) (propagated-inputs (list r-cluster)) (home-page "https://cran.r-project.org/web/packages/clue/") @@ -25985,14 +26063,14 @@ be used further by e.g. graphic devices.") (define-public r-graphlayouts (package (name "r-graphlayouts") - (version "1.0.0") + (version "1.0.1") (source (origin (method url-fetch) (uri (cran-uri "graphlayouts" version)) (sha256 (base32 - "1favwyk5jak95jhfyadcdgr53mq8g92z3vdp2662ivaj7lg48mc9")))) + "0x777ixw2vvj1z3dams0zmyk25v7cdm4sx8v6knlb2mfkkg2gcyk")))) (properties `((upstream-name . "graphlayouts"))) (build-system r-build-system) (propagated-inputs @@ -26136,14 +26214,14 @@ in pipelines.") (define-public r-parameters (package (name "r-parameters") - (version "0.21.1") + (version "0.21.2") (source (origin (method url-fetch) (uri (cran-uri "parameters" version)) (sha256 (base32 - "1vdk80q76srk1qg74xyggkc54a4s9p90v1n94b04wzyxp7sdd9kh")))) + "05ryyyibnm69hq1xa84r9n2gr1s1ifds70z4awmib2ch62098m43")))) (properties `((upstream-name . "parameters"))) (build-system r-build-system) (propagated-inputs @@ -27504,14 +27582,14 @@ models.") (define-public r-gamlss (package (name "r-gamlss") - (version "5.4-18") + (version "5.4-20") (source (origin (method url-fetch) (uri (cran-uri "gamlss" version)) (sha256 (base32 - "1wj6hx6z48zpwkqz3w68dfsf2nfj8clhwqykq5ln94vrarqaim7g")))) + "0wv812xby0i8zn07zw30ic4mmr418gk1ch1lvyh0kybkw4h1w356")))) (properties `((upstream-name . "gamlss"))) (build-system r-build-system) (propagated-inputs @@ -27869,14 +27947,14 @@ transcription, ...") (define-public r-seewave (package (name "r-seewave") - (version "2.2.1") + (version "2.2.2") (source (origin (method url-fetch) (uri (cran-uri "seewave" version)) (sha256 (base32 - "0whfanh3949162575ddw5y6s5ydq9v24l929gwdd1jv16xzlnp9h")))) + "12r09cirqzpg0lki304kfrdvxhdjpvsficba8inmnr4qzpfw7s5a")))) (properties `((upstream-name . "seewave"))) (build-system r-build-system) (inputs @@ -28938,13 +29016,13 @@ classification and regression models.") (define-public r-caretensemble (package (name "r-caretensemble") - (version "2.0.2") + (version "2.0.3") (source (origin (method url-fetch) (uri (cran-uri "caretEnsemble" version)) (sha256 (base32 - "0kagw1ilfz1yy1q0ysmkp3f13k08hiq84xk7d0xp5p7d5dsg7z6q")))) + "14d318czpqpalf18ggd9mx6f4nz3r4zilljvgxzy2a8v450y96ch")))) (properties `((upstream-name . "caretEnsemble"))) (build-system r-build-system) (propagated-inputs (list r-caret @@ -29732,18 +29810,18 @@ automatically show a loader when the output is (re)calculating.") (define-public r-rsvg (package (name "r-rsvg") - (version "2.4.0") + (version "2.5.0") (source (origin (method url-fetch) (uri (cran-uri "rsvg" version)) (sha256 (base32 - "1schf5gfqzvwmaigdsic5va9bbk9ycvcisiyll8xjjw116y9cxyb")))) + "1gi31hhs488a90lcql9c1hhsbymskj5brp05ag5z9f0azspazpdm")))) (properties `((upstream-name . "rsvg"))) (build-system r-build-system) (inputs - (list (librsvg-for-system) zlib)) + (list (librsvg-for-system) pcre2 zlib)) (native-inputs (list pkg-config r-knitr)) (home-page "https://github.com/jeroen/rsvg#readme") @@ -30735,14 +30813,14 @@ estimate parameters given observed data.") (define-public r-kutils (package (name "r-kutils") - (version "1.72") + (version "1.73") (source (origin (method url-fetch) (uri (cran-uri "kutils" version)) (sha256 (base32 - "0mnrh1bfpwssw9j5lspvwfawqx9s4fxy2gh3n60knjzbzrzqckp4")))) + "0xqg1s48afpn2w0mlqfwz3sj1gdjf05cpxq4z9r01k1476lvh6c9")))) (properties `((upstream-name . "kutils"))) (build-system r-build-system) (propagated-inputs @@ -31039,14 +31117,14 @@ Latent regression models and plausible value imputation are also supported.") (define-public r-erm (package (name "r-erm") - (version "1.0-2") + (version "1.0-4") (source (origin (method url-fetch) (uri (cran-uri "eRm" version)) (sha256 (base32 - "0smym010kswc5vx90qr3x1vl16xj1x1i54rvrj006dc4agc1vmlk")))) + "0rp2lxkwkh09zmv101rzk7x1v1pmscp71qpf8f4chxp3idg6rpid")))) (properties `((upstream-name . "eRm"))) (build-system r-build-system) (propagated-inputs @@ -31182,14 +31260,14 @@ and reproducible way.") (define-public r-rsconnect (package (name "r-rsconnect") - (version "1.1.0") + (version "1.1.1") (source (origin (method url-fetch) (uri (cran-uri "rsconnect" version)) (sha256 (base32 - "1jpz9cx2fqj3cp69xd2vi9gc5wdfrs4rbpy81mm7hq1iaq5nd7pc")))) + "1v88ary1gbrhmcbr2syq4jh7ln5ldd9b6pdh508bwxnkivqfdg3p")))) (properties `((upstream-name . "rsconnect"))) (build-system r-build-system) (propagated-inputs @@ -31444,14 +31522,14 @@ need to derive the partial derivatives.") (define-public r-rstanarm (package (name "r-rstanarm") - (version "2.21.4") + (version "2.26.1") (source (origin (method url-fetch) (uri (cran-uri "rstanarm" version)) (sha256 (base32 - "11diz486ak31zx5402kra3s6nd76cvnla8frfn0kc7dzwhiwcspc")))) + "0i24ah6mcvvb25pkynkacjn1l7dqk3yfnyk42fv32n83dqnpjm2a")))) (properties `((upstream-name . "rstanarm"))) (build-system r-build-system) (inputs @@ -31464,6 +31542,7 @@ need to derive the partial derivatives.") r-loo r-matrix r-nlme + r-posterior r-rcpp r-rcppeigen r-rcppparallel @@ -32376,20 +32455,21 @@ here.") (define-public r-projpred (package (name "r-projpred") - (version "2.6.0") + (version "2.7.0") (source (origin (method url-fetch) (uri (cran-uri "projpred" version)) (sha256 (base32 - "1nkil537n43sz0ajkcyr0i38hb852qgcdxlgnirqkl0w98ax2hac")))) + "0dydkvb0znqli4lbncihk8yimsiakvdyra5cx1cakvm73mn37s5r")))) (properties `((upstream-name . "projpred"))) (build-system r-build-system) (propagated-inputs (list r-abind r-gamm4 r-ggplot2 + r-gtools r-lme4 r-loo r-mass @@ -32499,14 +32579,14 @@ inference diagnostics. (define-public r-brms (package (name "r-brms") - (version "2.20.1") + (version "2.20.4") (source (origin (method url-fetch) (uri (cran-uri "brms" version)) (sha256 (base32 - "0p0y2x1bkfvb9np08sq5riv8cmd3qd18gmllwch91ggn653k6229")))) + "0bq76birbaqi2387d4qv2m8vvjcki9nkc2jychz6nkhcd7mg79h0")))) (properties `((upstream-name . "brms"))) (build-system r-build-system) (propagated-inputs @@ -34976,14 +35056,14 @@ consistent interface, and the package is built on the @code{stringi} and (define-public r-hunspell (package (name "r-hunspell") - (version "3.0.2") + (version "3.0.3") (source (origin (method url-fetch) (uri (cran-uri "hunspell" version)) (sha256 (base32 - "0kij39rhsx7s4lfddy6745f1zjyi003srj14ckjpbhkcyxamk8jy")))) + "1ws2hhrn3iw89vs17q9claf0cip5hy6rbgdr4dcjmzrdlrri9apx")))) (properties `((upstream-name . "hunspell"))) (build-system r-build-system) (propagated-inputs @@ -35292,14 +35372,14 @@ package also provides functions to visualize the observed data and the MLE.") (define-public r-metafor (package (name "r-metafor") - (version "4.2-0") + (version "4.4-0") (source (origin (method url-fetch) (uri (cran-uri "metafor" version)) (sha256 (base32 - "0rm7w1mmjhry4xkrv6nkhg5ln1cb61lg66y2nbwim32n9wxl5fzi")))) + "1m4762fn4zbjpnx9vxyy9gvzyzn3avxnqpzmbj45w8241g3s1b32")))) (properties `((upstream-name . "metafor"))) (build-system r-build-system) (propagated-inputs @@ -35509,14 +35589,14 @@ data to rasters. It speeds up plotting of data with millions of points.") (define-public r-seuratobject (package (name "r-seuratobject") - (version "4.1.3") + (version "4.1.4") (source (origin (method url-fetch) (uri (cran-uri "SeuratObject" version)) (sha256 (base32 - "1lw6v5mwq0sngjr33j99r5h42kaxlbq271a51xzkcnhnyra2fpaq")))) + "1vqhad76hnr0l47klg56fniah4cvpzbkkl0j1cn9cp3rv6d69rvl")))) (properties `((upstream-name . "SeuratObject"))) (build-system r-build-system) (propagated-inputs @@ -35572,13 +35652,13 @@ other R users.") (define-public r-seurat (package (name "r-seurat") - (version "4.3.0.1") + (version "4.4.0") (source (origin (method url-fetch) (uri (cran-uri "Seurat" version)) (sha256 (base32 - "04lbwk8mcv7gsi70sij264mz80frx1pr60ihv9dqg63sgr234ax4")))) + "1pdlvjh5xs1fyj2zic98sfz9zazbb45qywfqnhfzqb34jyaxy5qg")))) (properties `((upstream-name . "Seurat"))) (build-system r-build-system) (propagated-inputs @@ -35607,6 +35687,7 @@ other R users.") r-plotly r-png r-progressr + r-purrr r-rann r-rcolorbrewer r-rcpp @@ -36200,13 +36281,13 @@ are.") (define-public r-mlr3misc (package (name "r-mlr3misc") - (version "0.12.0") + (version "0.13.0") (source (origin (method url-fetch) (uri (cran-uri "mlr3misc" version)) (sha256 (base32 - "028cqh7fvy1s16qr46znk3ijmsl7ifsxbrkbrz37w2mri0mxv3jw")))) + "0b565hy86bcgjv8k9qipkcgsag6jiiv1jx5lgi1iddcf8rg6bind")))) (build-system r-build-system) (propagated-inputs (list r-backports r-checkmate r-data-table r-digest r-r6)) @@ -36578,14 +36659,14 @@ unit tests of graphics).") (define-public r-vdiffr (package (name "r-vdiffr") - (version "1.0.6") + (version "1.0.7") (source (origin (method url-fetch) (uri (cran-uri "vdiffr" version)) (sha256 (base32 - "1mi39pkrvsba84gfspwpxv29fz818hjx36597qqbpywicxkr80b2")))) + "1ljj94swqgs8pvicdrlals6pckm7knwfvxxmmbhhi2zfcxdjwhzd")))) (properties `((upstream-name . "vdiffr"))) (build-system r-build-system) (inputs @@ -37286,14 +37367,14 @@ parallel programming style, which is intended for batch parallel execution.") (define-public r-pdftools (package (name "r-pdftools") - (version "3.3.3") + (version "3.4.0") (source (origin (method url-fetch) (uri (cran-uri "pdftools" version)) (sha256 (base32 - "174hsmdpykgxkgbif562lsnrlsybhjbjh4r7w9pc5hss42jxzh7z")))) + "0r1c91qrva8lz0gs717llzs6zjiqjrdjhi71asf9bmx600hpp78b")))) (properties `((upstream-name . "pdftools"))) (build-system r-build-system) (inputs (list zlib poppler)) @@ -37629,14 +37710,14 @@ BTM-WWW13.pdf}.") (define-public r-delaporte (package (name "r-delaporte") - (version "8.2.0") + (version "8.3.0") (source (origin (method url-fetch) (uri (cran-uri "Delaporte" version)) (sha256 (base32 - "0lp2k3j3dw73rnpx42cdwvqylib2lj5ijhqfpfgxjwnvq3138clr")))) + "1g499xrb3hhd9xrzbxm1d911hm06mfn119xxmcr6f47vsz15ksvy")))) (properties `((upstream-name . "Delaporte"))) (build-system r-build-system) (native-inputs (list gfortran)) @@ -37962,14 +38043,14 @@ time zone manipulations.") (define-public r-vroom (package (name "r-vroom") - (version "1.6.3") + (version "1.6.4") (source (origin (method url-fetch) (uri (cran-uri "vroom" version)) (sha256 (base32 - "0qsz38v64b51jpm2s93lcci4xjjxs8sws4l4p1iwymsa5gjh0j6w")))) + "0kg25b3drfv4dgvciwsv6wgw6v0lf1maigyhllw9hh114rmzjild")))) (properties `((upstream-name . "vroom"))) (build-system r-build-system) (propagated-inputs @@ -38070,13 +38151,13 @@ using either @code{httpuv} or @code{Rhttpd}.") (define-public r-protolite (package (name "r-protolite") - (version "2.2.0") + (version "2.3.0") (source (origin (method url-fetch) (uri (cran-uri "protolite" version)) (sha256 - (base32 "1bqqw43irk2a9xqlylxlbxpcaa40wdxdx4y6kqhzibxvw1p7drii")))) + (base32 "1sccyyf89bban3b83yxzkcyqpgcp7ggm9lirxixzjj433baj9vsk")))) (properties `((upstream-name . "protolite"))) (build-system r-build-system) (inputs @@ -38186,14 +38267,14 @@ Apache2.") (define-public r-exactextractr (package (name "r-exactextractr") - (version "0.9.1") + (version "0.10.0") (source (origin (method url-fetch) (uri (cran-uri "exactextractr" version)) (sha256 (base32 - "18glacc1v0kj65g6fbqnhvgg83sr334chdfll7nhjnx44my3dkzh")))) + "1pj3145c20r4hnyyrynzmps96a4fpgn408lrl6b9bs79y33c6zwv")))) (properties `((upstream-name . "exactextractr"))) (build-system r-build-system) (inputs (list geos)) @@ -38375,19 +38456,20 @@ Tensorflow graphs.") (define-public r-tensorflow (package (name "r-tensorflow") - (version "2.13.0") + (version "2.14.0") (source (origin (method url-fetch) (uri (cran-uri "tensorflow" version)) (sha256 (base32 - "016km378m1w50yb9myrb46xi6vcp9qv9z526cb59qpg83r08ac4z")))) + "1zv7b3r8c2nzyrq295pvdf3kv2mz7cmm4adck508qr12rb9d5ybx")))) (properties `((upstream-name . "tensorflow"))) (build-system r-build-system) (inputs (list tensorflow)) (propagated-inputs (list r-config + r-lifecycle r-processx r-reticulate r-rstudioapi @@ -38707,14 +38789,14 @@ fully reproducible.") (define-public r-paws-common (package (name "r-paws-common") - (version "0.6.0") + (version "0.6.1") (source (origin (method url-fetch) (uri (cran-uri "paws.common" version)) (sha256 (base32 - "1451705w30lb33msi4qgzpfmw6xnwh2ffh30fwb9im8g47fqm2bw")))) + "0haw72885xmzl6rmb8vlkqwnxh7iq5cr89d852j2vk56sxjxv1y5")))) (properties `((upstream-name . "paws.common"))) (build-system r-build-system) (propagated-inputs @@ -39044,19 +39126,20 @@ functions-as-a-service, containers, batch processing, and more.") (define-public r-paws (package (name "r-paws") - (version "0.3.0") + (version "0.4.0") (source (origin (method url-fetch) (uri (cran-uri "paws" version)) (sha256 (base32 - "1s4nya5xghjj1a2w8bqcmnpnpdw7li22asssm2ihv68zvlxavzdk")))) + "1l9pjmfnhqgzxghxz22fbqc43x9am6d21f982p2sykxv271yclhf")))) (properties `((upstream-name . "paws"))) (build-system r-build-system) (propagated-inputs (list r-paws-analytics r-paws-application-integration + r-paws-common r-paws-compute r-paws-cost-management r-paws-customer-engagement @@ -39661,14 +39744,14 @@ R-squared values.") (define-public r-mockery (package (name "r-mockery") - (version "0.4.3") + (version "0.4.4") (source (origin (method url-fetch) (uri (cran-uri "mockery" version)) (sha256 (base32 - "0sj77m9vgn4bzb8c8nq93xb9lm8ih8rcb7sfccripraibibg3jcz")))) + "1hs550i2nqnn1yyx2sd7babamkq3sm7cxiwzcj8wlps5yah208h7")))) (properties `((upstream-name . "mockery"))) (build-system r-build-system) (propagated-inputs @@ -39829,13 +39912,13 @@ constructing and executing optimized SQL queries.") (define-public r-varhandle (package (name "r-varhandle") - (version "2.0.5") + (version "2.0.6") (source (origin (method url-fetch) (uri (cran-uri "varhandle" version)) (sha256 - (base32 "1l42d0s6fbjjc9l28a2m3myxkrx2c0p0b9yj8wjjjgilw19yc3lv")))) + (base32 "0xy5w7cz9sb0xmxvzajg4sf0ip2ihxc5nimh10awchvkywzgsyjf")))) (properties `((upstream-name . "varhandle"))) (build-system r-build-system) (home-page "https://bitbucket.org/mehrad_mahmoudian/varhandle") @@ -40138,13 +40221,13 @@ calculate a dimension's unknown value from other dimensions' measurements.") (define-public r-sungeo (package (name "r-sungeo") - (version "0.2.292") + (version "1.1.1") (source (origin (method url-fetch) (uri (cran-uri "SUNGEO" version)) (sha256 (base32 - "1xav5by7sl21cwfg9m1ij1lz1kvdlqkkp2ah67rnj9vp4vk7nkfg")) + "1sy9kw3nr69jf33034kcnv418lqyz6sfrd01646i7dfsm64aydp2")) (modules '((guix build utils))) (snippet '(begin ;; Fortunately, the package does not actually use @@ -40163,7 +40246,6 @@ calculate a dimension's unknown value from other dimensions' measurements.") r-cartogram r-data-table r-dplyr - r-fasterize r-httr r-jsonlite r-measurements @@ -40176,7 +40258,9 @@ calculate a dimension's unknown value from other dimensions' measurements.") r-rlang r-sf r-sp - r-spdep)) + r-spdep + r-stringr + r-terra)) (home-page "https://github.com/zhukovyuri/SUNGEO/") (synopsis "Sub-National Geospatial Data Archive: Geoprocessing Toolkit") (description |