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| -rw-r--r-- | gnu/packages/bioinformatics.scm | 22 |
1 files changed, 22 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 36c9db90bd..d9c39fbb34 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -17604,6 +17604,28 @@ interest.") ;; Any version of the GPL (license license:gpl3+)))) +(define-public python-vireosnp + (package + (name "python-vireosnp") + (version "0.5.7") + (source (origin + (method url-fetch) + (uri (pypi-uri "vireoSNP" version)) + (sha256 + (base32 + "02ybhzivsxwnb1axlgbs63wni1j27xajnkl4jw1ps5vmsz2l4b0d")))) + (build-system python-build-system) + (propagated-inputs (list python-matplotlib python-numpy python-scipy)) + (home-page "https://github.com/huangyh09/vireoSNP") + (synopsis "Deconvolution based on SNP for multiplexed scRNA-seq data") + (description + "This package provides a deconvolution based on Single Nucleotide +Position (SNP) for multiplexed scRNA-seq data. The name vireo stand for +Variational Inference for Reconstructing Ensemble Origin by expressed SNPs in +multiplexed scRNA-seq data and follows the clone identification from +single-cell data named @url{https://github.com/PMBio/cardelino, cardelino}.") + (license license:asl2.0))) + (define-public ccwl (package (name "ccwl") |