diff options
| -rw-r--r-- | gnu/packages/bioconductor.scm | 84 |
1 files changed, 42 insertions, 42 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index e6f462b697..5a20fbbc64 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1173,48 +1173,6 @@ ranking by fold-change and visualization.") (description "This package contains data used by @code{AneuFinder}.") (license license:artistic2.0))) -(define-public r-aneufinder - (package - (name "r-aneufinder") - (version "1.22.0") - (source (origin - (method url-fetch) - (uri (bioconductor-uri "AneuFinder" version)) - (sha256 - (base32 - "0xn8952fkchhx7m8dam6gjy86j551xp1cs67510s1qrmfgzpkjp0")))) - (build-system r-build-system) - (native-inputs - (list r-knitr)) - (propagated-inputs - (list r-genomicranges - r-aneufinderdata - r-ecp - r-foreach - r-doparallel - r-biocgenerics - r-s4vectors - r-genomeinfodb - r-iranges - r-rsamtools - r-bamsignals - r-dnacopy - r-biostrings - r-genomicalignments - r-ggplot2 - r-reshape2 - r-ggdendro - r-ggrepel - r-reordercluster - r-mclust - r-cowplot)) - (home-page "https://bioconductor.org/packages/AneuFinder/") - (synopsis "Copy number variation analysis in single-cell-sequencing data") - (description "This package implements functions for copy number variant -calling, plotting, export and analysis from whole-genome single cell -sequencing data.") - (license license:artistic2.0))) - (define-public r-arrmdata (package (name "r-arrmdata") @@ -1587,6 +1545,48 @@ TCGAbiolinksGUI package.") ;;; Packages +(define-public r-aneufinder + (package + (name "r-aneufinder") + (version "1.22.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "AneuFinder" version)) + (sha256 + (base32 + "0xn8952fkchhx7m8dam6gjy86j551xp1cs67510s1qrmfgzpkjp0")))) + (build-system r-build-system) + (native-inputs + (list r-knitr)) + (propagated-inputs + (list r-genomicranges + r-aneufinderdata + r-ecp + r-foreach + r-doparallel + r-biocgenerics + r-s4vectors + r-genomeinfodb + r-iranges + r-rsamtools + r-bamsignals + r-dnacopy + r-biostrings + r-genomicalignments + r-ggplot2 + r-reshape2 + r-ggdendro + r-ggrepel + r-reordercluster + r-mclust + r-cowplot)) + (home-page "https://bioconductor.org/packages/AneuFinder/") + (synopsis "Copy number variation analysis in single-cell-sequencing data") + (description "This package implements functions for copy number variant +calling, plotting, export and analysis from whole-genome single cell +sequencing data.") + (license license:artistic2.0))) + (define-public r-biocversion (package (name "r-biocversion") |