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| -rw-r--r-- | gnu/packages/bioconductor.scm | 31 |
1 files changed, 31 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index e7354aa4e3..ad20602ff6 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2317,6 +2317,37 @@ reproducible gene expression signatures capable of accurately distinguishing tumor samples from healthy controls.") (license license:artistic2.0))) +(define-public r-attract + (package + (name "r-attract") + (version "1.48.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "attract" version)) + (sha256 + (base32 + "0f1fsv278kpnxvqg9qa5rw2k3zr8zws0ab73ldl60h6pv9cy8x82")))) + (properties `((upstream-name . "attract"))) + (build-system r-build-system) + (propagated-inputs + (list r-annotationdbi + r-biobase + r-cluster + r-gostats + r-keggrest + r-limma + r-org-hs-eg-db + r-reactome-db)) + (home-page "https://bioconductor.org/packages/attract") + (synopsis "Finding drivers of Kauffman's attractor landscape") + (description + "This package contains the functions to find the gene expression modules +that represent the drivers of Kauffman's attractor landscape. The modules are +the core attractor pathways that discriminate between different cell types of +groups of interest. Each pathway has a set of synexpression groups, which show +transcriptionally-coordinated changes in gene expression.") + (license license:lgpl2.0+))) + (define-public r-awfisher (package (name "r-awfisher") |