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authorRicardo Wurmus <rekado@elephly.net>2019-12-17 19:47:27 +0100
committerRicardo Wurmus <rekado@elephly.net>2019-12-17 20:02:17 +0100
commite823337c6eb9ab99e0e3311d4c8024cb220afd08 (patch)
tree8b4e774c8307d25fdaa0a754442ea4389f19ac31 /gnu
parent40fe63ad8a3578a2a7090ee18fcb3d35096ba8c8 (diff)
downloadguix-e823337c6eb9ab99e0e3311d4c8024cb220afd08.tar
guix-e823337c6eb9ab99e0e3311d4c8024cb220afd08.tar.gz
gnu: Add r-rsbml.
* gnu/packages/bioconductor.scm (r-rsbml): New variable.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioconductor.scm28
1 files changed, 28 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index beb46c9ded..4e7bfc582a 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -6678,3 +6678,31 @@ tests the null hypothesis that the target regions have the same probability of
having footprints for the TF k as the background regions while correcting for
the read count and GC content bias.")
(license license:gpl3)))
+
+(define-public r-rsbml
+ (package
+ (name "r-rsbml")
+ (version "2.44.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "rsbml" version))
+ (sha256
+ (base32
+ "1dbp0aaijxn3na26b68ws0v9qzvml61ifb9z4i8pz7q6h48n7lxa"))))
+ (properties `((upstream-name . "rsbml")))
+ (build-system r-build-system)
+ (inputs
+ `(("libsbml" ,libsbml)
+ ("zlib" ,zlib)))
+ (propagated-inputs
+ `(("r-biocgenerics" ,r-biocgenerics)
+ ("r-graph" ,r-graph)))
+ (native-inputs
+ `(("pkg-config" ,pkg-config)))
+ (home-page "http://www.sbml.org")
+ (synopsis "R support for SBML")
+ (description
+ "This package provides an R interface to libsbml for SBML parsing,
+validating output, provides an S4 SBML DOM, converts SBML to R graph objects.")
+ (license license:artistic2.0)))