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| author | Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> | 2020-12-16 22:59:42 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-12-17 11:26:53 +0100 |
| commit | 04a05946625fc732afc7720eb3fd477901c89953 (patch) | |
| tree | 477da9bb037b356109b8590e3203b6b05d8fb681 /gnu/packages | |
| parent | e4b0794e52d952da655953285c7ad793b3708418 (diff) | |
| download | guix-04a05946625fc732afc7720eb3fd477901c89953.tar guix-04a05946625fc732afc7720eb3fd477901c89953.tar.gz | |
gnu: Add r-org-eck12-eg-db.
* gnu/packages/bioconductor.scm (r-org-eck12-eg-db): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 195128a190..41cbcf68e4 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -50,6 +50,33 @@ ;;; Annotations +(define-public r-org-eck12-eg-db + (package + (name "r-org-eck12-eg-db") + (version "3.12.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "org.EcK12.eg.db" version 'annotation)) + (sha256 + (base32 "0c4p6jr83k0gm6pvn760yr8xf33wggrfcr6fg7a42a96bcf817gs")))) + (properties + `((upstream-name . "org.EcK12.eg.db"))) + (build-system r-build-system) + (propagated-inputs + `(("r-annotationdbi" ,r-annotationdbi))) + (home-page "https://bioconductor.org/packages/org.EcK12.eg.db") + (synopsis "Genome wide annotation for E coli strain K12") + (description + "This package provides genome wide annotation for E coli strain K12, +primarily based on mapping using Entrez Gene identifiers. Entrez Gene is +National Center for Biotechnology Information (NCBI)’s database for +gene-specific information. Entrez Gene maintains records from genomes which +have been completely sequenced, which have an active research community to +submit gene-specific information, or which are scheduled for intense sequence +analysis.") + (license license:artistic2.0))) + (define-public r-reactome-db (package (name "r-reactome-db") |