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| author | Ricardo Wurmus <rekado@elephly.net> | 2024-05-03 14:55:53 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2024-05-05 22:38:18 +0200 |
| commit | 041ea43a86f39e7c55ba3551bbe59d0ef9798c73 (patch) | |
| tree | 26cdc2b6df65482104675b3705a214b935e04e68 /gnu/packages/python-science.scm | |
| parent | 99bf1b100281467b6a7e296e8ad2dadd2b9402de (diff) | |
| download | guix-041ea43a86f39e7c55ba3551bbe59d0ef9798c73.tar guix-041ea43a86f39e7c55ba3551bbe59d0ef9798c73.tar.gz | |
gnu: python-pingouin: Update to 0.5.4.
* gnu/packages/python-science.scm (python-pingouin): Update to 0.5.4.
[build-system]: Use pyproject-build-system.
[arguments]: Remove custom 'check phase; add 'sklearn-compatibility phase;
skip one test.
Change-Id: I8d13f15558eadee0547f04bc4bb89a0fd0e0767b
Diffstat (limited to 'gnu/packages/python-science.scm')
| -rw-r--r-- | gnu/packages/python-science.scm | 23 |
1 files changed, 14 insertions, 9 deletions
diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 63df0ae5e4..c5e9a41ce2 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -1991,7 +1991,7 @@ of Pandas (define-public python-pingouin (package (name "python-pingouin") - (version "0.5.2") + (version "0.5.4") (source ;; The PyPI tarball does not contain the tests. (origin @@ -2002,11 +2002,15 @@ of Pandas (file-name (git-file-name name version)) (sha256 (base32 - "0czy7cpn6xx9fs6wbz6rq2lpkb1a89bzxj1anf2f9in1m5qyrh83")))) - (build-system python-build-system) + "1j3qkgvyc31604ddl952h4hwza7schg8kwkycmxvpvx7xjj7nn68")))) + (build-system pyproject-build-system) (arguments - `(#:phases - (modify-phases %standard-phases + (list + #:test-flags + ;; This one fails due to minor differences in accuracy + '(list "-k" "not test_logistic_regression") + #:phases + '(modify-phases %standard-phases (add-after 'unpack 'loosen-requirements (lambda _ (substitute* '("requirements.txt" "setup.py") @@ -2024,10 +2028,11 @@ of Pandas (substitute* "pingouin/__init__.py" (("^from outdated[^\n]*") "") (("^warn_if_outdated[^\n]*") "")))) - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? - (invoke "pytest"))))))) + (add-after 'unpack 'sklearn-compatibility + (lambda _ + (substitute* "pingouin/regression.py" + (("kwargs\\[\"penalty\"\\] = \"none\"") + "kwargs[\"penalty\"] = None"))))))) (native-inputs (list python-pytest python-pytest-cov)) (propagated-inputs |