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| author | Ben Woodcroft <donttrustben@gmail.com> | 2017-08-31 09:31:54 +0800 |
|---|---|---|
| committer | Ben Woodcroft <donttrustben@gmail.com> | 2017-08-31 10:43:18 +0800 |
| commit | 690a904ad766dfecf78749d121af528a7a49fa77 (patch) | |
| tree | ef49217529233ca8f8ba3ad5caaa008fd844859d /gnu/packages/patches | |
| parent | 2d2e97bd71ac034900e26dd759b106fae0839162 (diff) | |
| download | guix-690a904ad766dfecf78749d121af528a7a49fa77.tar guix-690a904ad766dfecf78749d121af528a7a49fa77.tar.gz | |
gnu: metabat: Update to 2.11.3.
* gnu/packages/bioinformatics.scm (metabat): Update to 2.11.3.
[source]: Use git-fetch. Remove boost-related patch.
* gnu/packages/patches/metabat-fix-boost-issue.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
Diffstat (limited to 'gnu/packages/patches')
| -rw-r--r-- | gnu/packages/patches/metabat-fix-boost-issue.patch | 27 |
1 files changed, 0 insertions, 27 deletions
diff --git a/gnu/packages/patches/metabat-fix-boost-issue.patch b/gnu/packages/patches/metabat-fix-boost-issue.patch deleted file mode 100644 index 3382d84d66..0000000000 --- a/gnu/packages/patches/metabat-fix-boost-issue.patch +++ /dev/null @@ -1,27 +0,0 @@ -This patch fixes the issue described at -https://bitbucket.org/berkeleylab/metabat/issues/28/compilation-fail-with-boost-164 - -diff --git a/src/metabat.h b/src/metabat.h -index 32ae94c..2292c04 100644 ---- a/src/metabat.h -+++ b/src/metabat.h -@@ -35,6 +35,7 @@ KSEQ_INIT(gzFile, gzread) - - #include <boost/program_options.hpp> - #include <boost/algorithm/string.hpp> -+#include <boost/serialization/array_wrapper.hpp> - #include <boost/numeric/ublas/matrix.hpp> - #include <boost/math/distributions.hpp> - #include <boost/serialization/serialization.hpp> -diff --git a/src/metabat2.h b/src/metabat2.h -index 60a9998..19fa815 100644 ---- a/src/metabat2.h -+++ b/src/metabat2.h -@@ -41,6 +41,7 @@ KSEQ_INIT(gzFile, gzread) - - #include <boost/program_options.hpp> - #include <boost/algorithm/string.hpp> -+#include <boost/serialization/array_wrapper.hpp> - #include <boost/numeric/ublas/matrix.hpp> - #include <boost/numeric/ublas/matrix_sparse.hpp> - #include <boost/numeric/ublas/matrix_proxy.hpp> |