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| author | Ricardo Wurmus <rekado@elephly.net> | 2024-01-23 12:21:12 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2024-01-23 13:36:47 +0100 |
| commit | 123c880fe94c0a75de9798fcc99129af59f23b8c (patch) | |
| tree | ff2929187060aa8555184e481a2230fd0e498e41 /gnu/packages/graph.scm | |
| parent | 6e835cd380c040aefbf38959634022417b29eb5b (diff) | |
| download | guix-123c880fe94c0a75de9798fcc99129af59f23b8c.tar guix-123c880fe94c0a75de9798fcc99129af59f23b8c.tar.gz | |
gnu: Add python-pygsp.
* gnu/packages/graph.scm (python-pygsp): New variable.
Change-Id: I8dd195216617e5cdb4a7453ecbe23cd9ff9e06a3
Diffstat (limited to 'gnu/packages/graph.scm')
| -rw-r--r-- | gnu/packages/graph.scm | 38 |
1 files changed, 38 insertions, 0 deletions
diff --git a/gnu/packages/graph.scm b/gnu/packages/graph.scm index 9dfe2efbc9..6411afd9e0 100644 --- a/gnu/packages/graph.scm +++ b/gnu/packages/graph.scm @@ -64,6 +64,7 @@ #:use-module (gnu packages pretty-print) #:use-module (gnu packages python) #:use-module (gnu packages python-build) + #:use-module (gnu packages python-check) #:use-module (gnu packages python-compression) #:use-module (gnu packages python-science) #:use-module (gnu packages python-web) @@ -468,6 +469,43 @@ millions of nodes (as long as they can fit in memory). The core function is algorithm for a number of different methods.") (license license:gpl3+))) +(define-public python-pygsp + (package + (name "python-pygsp") + (version "0.5.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "PyGSP" version)) + (sha256 + (base32 "002q4z3p3ka81rzhgi66qqmz1ccrg9hwch4bax7jsqixg64asx28")))) + (build-system pyproject-build-system) + (arguments + (list + #:test-flags + ;; These all fail due to a type error in scipy. + '(list "-k" (string-append "not test_bunny" + " and not test_lowstretchtree" + " and not test_nngraph" + " and not test_plot_graphs" + " and not test_randomregular")) + #:phases + '(modify-phases %standard-phases + (add-after 'unpack 'disable-doctests + (lambda _ + (substitute* "pygsp/tests/test_all.py" + (("def test_docstrings.*") "def _disabled_test_docstrings():\n") + (("return doctest.DocFileSuite.*") "return False\n") + (("suites.append\\(test_docstrings.*") + ""))))))) + (propagated-inputs (list python-numpy python-scikit-image python-scipy)) + (native-inputs (list python-coverage python-coveralls python-flake8)) + (home-page "https://github.com/epfl-lts2/pygsp") + (synopsis "Graph Signal Processing in Python") + (description "The PyGSP is a Python package to ease signal processing on +graphs.") + (license license:bsd-3))) + (define-public faiss (package (name "faiss") |