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| author | Roel Janssen <roel@gnu.org> | 2020-11-13 11:29:38 +0100 |
|---|---|---|
| committer | Roel Janssen <roel@gnu.org> | 2020-11-13 14:49:31 +0100 |
| commit | c3232fcc7785abc1057a0d4b5b1832f1e39c9c1b (patch) | |
| tree | 443c43a9f1186795fbdcf900cf19d4f65f7f4d8b | |
| parent | da4a38edad52f7bb5a8d41465d09f3f0197fd0b7 (diff) | |
| download | guix-c3232fcc7785abc1057a0d4b5b1832f1e39c9c1b.tar guix-c3232fcc7785abc1057a0d4b5b1832f1e39c9c1b.tar.gz | |
gnu: bedtools: Use samtools-1.9.
The build for bedtools with samtools 1.11 triggers a testsuite
failure which is reported here:
https://github.com/arq5x/bedtools2/issues/814
* gnu/packages/bioinformatics.scm (bedtools): Use samtools-1.9.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index e047aebd1d..8ad38ac498 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -437,7 +437,7 @@ computational cluster.") (native-inputs `(("python" ,python-wrapper))) (inputs - `(("samtools" ,samtools) + `(("samtools" ,samtools-1.9) ("zlib" ,zlib))) (home-page "https://github.com/arq5x/bedtools2") (synopsis "Tools for genome analysis and arithmetic") |