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authorNavid Afkhami <navid.afkhami@mdc-berlin.de>2024-10-30 18:34:13 +0000
committerRicardo Wurmus <rekado@elephly.net>2024-11-01 12:13:29 +0100
commitb223d04784936e0e6d0f5ced7ea60cfb4784d8cd (patch)
tree23961e0c9c2c4e7071f8320ab157046bde446ec4
parenta5ed41e02ae6f13212b33f3bcbbd196d6fe68f72 (diff)
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guix-b223d04784936e0e6d0f5ced7ea60cfb4784d8cd.tar.gz
gnu: Add r-fateid.
* gnu/packages/cran.scm (r-fateid): New variable. Change-Id: If8d8dc20a0d377173a7428ebbfa238695a5d8002
-rw-r--r--gnu/packages/cran.scm29
1 files changed, 29 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index b1efab5758..94491228a1 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -1038,6 +1038,35 @@ work with FlowSOM and flow-cytometry use-cases.")
Distance (EMD).")
(license license:expat)))
+(define-public r-fateid
+ (package
+ (name "r-fateid")
+ (version "0.2.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "FateID" version))
+ (sha256
+ (base32 "0sgvaqhqkmmkcsl53bm1jlfpzrvzfb5cz8k513nizfsi638vydlm"))))
+ (properties `((upstream-name . "FateID")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-locfit
+ r-matrixstats
+ r-pheatmap
+ r-princurve
+ r-randomforest
+ r-rcolorbrewer
+ r-rtsne
+ r-som
+ r-umap))
+ (native-inputs (list r-knitr))
+ (home-page "https://cran.r-project.org/package=FateID")
+ (synopsis "Quantification of fate bias in multipotent progenitors")
+ (description
+ "This package computes cell fate bias for multi-lineage single-cell data.
+It also provides visualization tools for analyzing these biases.")
+ (license license:gpl3)))
+
(define-public r-fuzzyjoin
(package
(name "r-fuzzyjoin")