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| author | Christopher Baines <mail@cbaines.net> | 2019-03-05 08:11:27 +0000 |
|---|---|---|
| committer | Christopher Baines <mail@cbaines.net> | 2019-03-05 08:13:21 +0000 |
| commit | 60d386a7b8e39d3aaac881d1c027dc4042be03b5 (patch) | |
| tree | 29c8e6f6dce23689fc6fb097e0189ad83b45e1a5 | |
| parent | 9c7226dfd540db1094460ff7a850cfa1dd1f8b83 (diff) | |
| download | guix-remove-duplicate-r-dnacopy.tar guix-remove-duplicate-r-dnacopy.tar.gz | |
gnu: Remove duplicate r-dnacopy package.remove-duplicate-r-dnacopy
This package definition duplicates the earlier definition in the (gnu packages
bioinformatics) module.
This reverts commit c18dccffa20bf09826758210d457d1df477f959c.
* gnu/packages/bioconductor.scm (r-dnacopy): Remove this variable.
| -rw-r--r-- | gnu/packages/bioconductor.scm | 23 |
1 files changed, 0 insertions, 23 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index ae9d7070c3..dfd3de5901 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -27,7 +27,6 @@ #:use-module (gnu packages bioinformatics) #:use-module (gnu packages cran) #:use-module (gnu packages compression) - #:use-module (gnu packages gcc) #:use-module (gnu packages graph) #:use-module (gnu packages maths) #:use-module (gnu packages statistics) @@ -1178,28 +1177,6 @@ Viewer (SAV) files, access data, and generate QC plots.") sequencing data.") (license license:gpl2+))) -(define-public r-dnacopy - (package - (name "r-dnacopy") - (version "1.56.0") - (source - (origin - (method url-fetch) - (uri (bioconductor-uri "DNAcopy" version)) - (sha256 - (base32 - "04cqdqxhva66xwh1s2vffi56b9fcrqd4slcrvqasj5lp2rkjli82")))) - (properties `((upstream-name . "DNAcopy"))) - (build-system r-build-system) - (native-inputs `(("gfortran" ,gfortran))) - (home-page "https://bioconductor.org/packages/DNAcopy") - (synopsis "DNA copy number data analysis") - (description - "This package implements the @dfn{circular binary segmentation} (CBS) -algorithm to segment DNA copy number data and identify genomic regions with -abnormal copy number.") - (license license:gpl2+))) - ;; This is a CRAN package, but it uncharacteristically depends on a ;; Bioconductor package. (define-public r-htscluster |