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| author | Leo Famulari <leo@famulari.name> | 2016-11-25 11:20:21 -0500 |
|---|---|---|
| committer | Leo Famulari <leo@famulari.name> | 2016-11-25 11:20:21 -0500 |
| commit | de32aa74b4f7762e887e80047804c42d495ab841 (patch) | |
| tree | bc37856ba9036563aa9ca7809ea3e8cefcb670e9 /gnu/packages/bioinformatics.scm | |
| parent | d46491779e18cf614caeeb1b4becbd9171c64416 (diff) | |
| parent | d66cbd1adc799b08e66cd912822c6220499b4876 (diff) | |
| download | patches-de32aa74b4f7762e887e80047804c42d495ab841.tar patches-de32aa74b4f7762e887e80047804c42d495ab841.tar.gz | |
Merge branch 'master' into python-build-system
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 13 |
1 files changed, 3 insertions, 10 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index f9929dfa4f..959a7ac2fd 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1252,9 +1252,6 @@ splice junctions between exons.") (assoc-ref outputs "out") "/share/doc/bwa")) (man (string-append (assoc-ref outputs "out") "/share/man/man1"))) - (mkdir-p bin) - (mkdir-p doc) - (mkdir-p man) (install-file "bwa" bin) (install-file "README.md" doc) (install-file "bwa.1" man))) @@ -2018,7 +2015,7 @@ identify enrichments with functional annotations of the genome.") (define-public diamond (package (name "diamond") - (version "0.8.26") + (version "0.8.27") (source (origin (method url-fetch) (uri (string-append @@ -2027,7 +2024,7 @@ identify enrichments with functional annotations of the genome.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "17s38pgjih6yc2z81040pircbv60c9wr33mbcyki2rfpv8rbxlh0")))) + "0g0zdyfnri9v7nfbh8f7zqs4af1xydqkiw8m0cx4jc2ql4chpf6a")))) (build-system cmake-build-system) (arguments '(#:tests? #f ; no "check" target @@ -2125,7 +2122,6 @@ of nucleic acid binding proteins.") (lambda* (#:key outputs #:allow-other-keys) (let* ((out (assoc-ref outputs "out")) (bin (string-append out "/bin"))) - (mkdir-p bin) (for-each (lambda (file) (install-file file bin)) (find-files "../bin" ".*")) @@ -2708,7 +2704,7 @@ estimates transcript expression.") (alist-replace 'install (lambda* (#:key outputs #:allow-other-keys) - (let ((bin (string-append (assoc-ref outputs "out") "/bi/"))) + (let ((bin (string-append (assoc-ref outputs "out") "/bin/"))) (for-each (lambda (file) (install-file file bin)) (find-files @@ -4770,7 +4766,6 @@ optionally compressed by gzip.") (lambda* (#:key outputs #:allow-other-keys) (let* ((out (assoc-ref outputs "out")) (bin (string-append out "/bin"))) - (mkdir-p bin) (install-file "snap-aligner" bin) (install-file "SNAPCommand" bin) #t)))))) @@ -5630,7 +5625,6 @@ Needleman-Wunsch).") (replace 'install (lambda* (#:key outputs #:allow-other-keys) (let ((bin (string-append (assoc-ref outputs "out") "/bin"))) - (mkdir-p bin) (install-file "ParDRe" bin) #t)))))) (inputs @@ -7508,7 +7502,6 @@ intervals (e.g. genes, sequence alignments).") (lambda* (#:key outputs #:allow-other-keys) (let* ((out (assoc-ref outputs "out")) (bin (string-append out "/bin"))) - (mkdir-p bin) (for-each (lambda (file) (install-file file bin)) (find-files "bin" ".*"))) |