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* gnu: Add go-github-com-jbenet-go-cienv.Sharlatan Hellseher2024-03-16
| | | | | | * gnu/packages/golang-check.scm (go-github-com-jbenet-go-cienv): New variable. Change-Id: I3a24335bff63f4364695cad6a1c88ea09dc8d357
* gnu: guix-build-coordinator: Update to 0-100.14e18ee.Christopher Baines2024-03-16
| | | | | | | * gnu/packages/package-management.scm (guix-build-coordinator): Update to 0-100.14e18ee. Change-Id: I3842366296e45df569168854cce06a96519ebbfb
* Revert "gnu: python-docker: Update to 7.0.0."Arun Isaac2024-03-16
| | | | | | | | | This reverts commit d084fb4b04a1cebb59959633660013fff495cd0d. This breaks docker-compose. Until we can update to docker-compose 2.x, we continue with an older python-docker. Change-Id: I4954d1f072735b1e99de192b7df31b1be8179243
* gnu: wine-staging, wine64-staging: Update to 9.0.Kaelyn Takata2024-03-16
| | | | | | | * gnu/packages/wine.scm (wine-staging, wine64-staging): Update to 9.0. Change-Id: I0668d4f7f42eb6ba879025c38eeb51c805e4143d Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
* gnu: wine-minimal, wine, wine64: Update to 9.0.Kaelyn Takata2024-03-16
| | | | | | | * gnu/packages/wine.scm (wine-minimal, wine, wine64): Update to 9.0. Change-Id: Ib20f8e5fe9eb071fd6be0ba81e501867d0535273 Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
* gnu: frescobaldi: Make it display icons with qtsvg-5.Marco Rimoldi2024-03-16
| | | | | | | | | | * gnu/packages/music.scm (frescobaldi) [origin]<uri>: Updated to avoid automatic redirect. [arguments]<phases>: Add 'wrap-executable to export QT_PLUGIN_PATH. [inputs]: Add qtsvg-5, bash-minimal. Change-Id: I55b3c56d41bd60e4ba4c938109ff41631e211ad2 Signed-off-by: Christopher Baines <mail@cbaines.net>
* gnu: portmidi: Add variant portmidi-2 updated to release 2.0.4.Marco Rimoldi2024-03-16
| | | | | | | | | | | | | | Tested with package Frescobaldi. Other packages dependent on the old 217 version still need to be tested and updated so that it can be phased out. * gnu/packages/music.scm (portmidi): Add variant portmidi-2. [version]: Change to new scheme, jumping from 217 to 2.0.4. [source]: Change origin from Sourceforge to GitHub. * gnu/packages/music.scm (python-pyportmidi) [inputs]: Change portmidi to portmidi-2. * gnu/packages/music.scm (frescobaldi) [inputs]: Change portmidi to portmidi-2. Change-Id: I2530d206e19e885082a95f1aac65348e7a51d4ca Signed-off-by: Christopher Baines <mail@cbaines.net>
* gnu: python-pyportmidi: Update to 0.0.7-0.d9e5ee0.Marco Rimoldi2024-03-16
| | | | | | | | | | | | | | | When the PortMidi project moved to GitHub in 2021, changing version numbering scheme, the Python bindings were moved to a separate repository and marked as needing a new maintainer. The chosen revision, dated June 2023, is the first to allow the package to build successfully in the temporary lack of an official new release. * gnu/packages/music.scm (python-pyportmidi): Source moved, fix build. [version]: Change to new scheme, jumping from 217 to 0.0.7. [source]: Change origin from Sourceforge to GitHub. Change-Id: Ibe02edca39731f3f3c9001818665d2da97df9465 Signed-off-by: Christopher Baines <mail@cbaines.net>
* gnu: python-poppler-qt5: Update to 21.3.0.Marco Rimoldi2024-03-16
| | | | | | | | | | | * gnu/packages/pdf.scm (python-poppler-qt5): Update to 21.3.0. [build-system]: Change to pyproject. [inputs]: Change SIP to current version variant. * gnu/packages/patches/python-poppler-qt5-fix-build.patch: Delete file. * gnu/local.mk (dist_patch_DATA): De-register said patch. Change-Id: I30d6e2a3180505091d8072ed452211b0bb3a0178 Signed-off-by: Christopher Baines <mail@cbaines.net>
* gnu: freeipmi: Update to 1.6.14.Andy Tai2024-03-16
| | | | | | | * gnu/packages/freeipmi.scm (freeipmi): Update to 1.6.14. Change-Id: I4c729baaf2a45391f95b6f96441a96d2b0f58f40 Signed-off-by: Christopher Baines <mail@cbaines.net>
* gnu: guix-data-service: Update to 0.0.1-46.b4583bb.Christopher Baines2024-03-16
| | | | | | * gnu/packages/web.scm (guix-data-service): Update to 0.0.1-46.b4583bb. Change-Id: Iad913c9e7abc43855e8b7964e7753438df6e2300
* gnu: bffe: Update to 0-5.bdfaab9.Christopher Baines2024-03-16
| | | | | | * gnu/packages/package-management.scm (bffe): Update to 0-5.bdfaab9. Change-Id: I7483026b61971e6420eab5257f0ef8afd54d032d
* gnu: guix-build-coordinator: Update to 0-99.d802b81.Christopher Baines2024-03-16
| | | | | | | * gnu/packages/package-management.scm (guix-build-coordinator): Update to 0-99.d802b81. Change-Id: I82067857ed358c0895162b4f2fb7a775ede12e7d
* gnu: go-github-com-bwesterb-go-ristretto: Move to golang-crypto.Sharlatan Hellseher2024-03-15
| | | | | | | | * gnu/packages/golang.scm (go-github-com-bwesterb-go-ristretto): Move from here ... * gnu/packages/golang-crypto.scm: ... to here. Change-Id: Ia028e4c5ccceaec3f0ceb828a147eff72cf6a20f
* gnu: go-github-com-beorn7-perks-quantile: Move to golang-xyz.Sharlatan Hellseher2024-03-15
| | | | | | | | * gnu/packages/syncthing.scm (go-github-com-beorn7-perks-quantile): Move from here ... * gnu/packages/golang-xyz.scm: ... to here. Change-Id: I09a2080b78fd3273af75cbbbb49718bb8eec86e5
* gnu: kubo: Unbundle more packages.Sharlatan Hellseher2024-03-15
| | | | | | | | | | * gnu/packages/ipfs.scm (kubo) [snippet]: Remove more available vendor packages. [inputs]: Add go-github-com-benbjohnson-clock and go-github-com-blang-semver-v4. Remove go-github-com-cheggaaa-pb-v3, fail over to vendor package explicitly as v3 is not required. Change-Id: I8317ea656120b034a98d180278b928f0744f5fbb
* gnu: go-github-com-beorn7-perks-quantile: Fix indentation.Sharlatan Hellseher2024-03-15
| | | | | | | * gnu/packages/syncthing.scm (go-github-com-beorn7-perks-quantile): Fix indentation. Change-Id: Id159b4314fc25ecebc0737221995823e28045626
* gnu: go-github-com-beorn7-perks-quantile: Update to 1.0.1.Sharlatan Hellseher2024-03-15
| | | | | | | * gnu/packages/syncthing.scm (go-github-com-beorn7-perks-quantile): Update to 1.0.1. Change-Id: Ie8c864dbc15b3aef3e4575337b940b625d6f9bbf
* gnu: kubo: Sort inputs alphabetically.Sharlatan Hellseher2024-03-15
| | | | | | | * gnu/packages/ipfs.scm (kudo) [inputs]: Sort alphabetically to ease maintenance. Change-Id: Icb95464b5b8cf7d6e26285628198cfcd5c90e695
* gnu: Add go-github-com-blang-semver-v4.Sharlatan Hellseher2024-03-15
| | | | | | * gnu/packages/golang-xyz.scm (go-github-com-blang-semver-v4): New variable. Change-Id: I87132b1b727b7e6ef4d46bb08dc5ad509db4e2e4
* gnu: go-github-com-blang-semver: Fix indentation.Sharlatan Hellseher2024-03-15
| | | | | | | * gnu/packages/golang-xyz.scm (go-github-com-blang-semver): Fix indentation. Change-Id: I9b5e792f2ef859ad7a9d799ba1e369f96e53294b
* gnu: go-github-com-blang-semver: Update to 3.8.0.Sharlatan Hellseher2024-03-15
| | | | | | * gnu/packages/golang-xyz.scm (go-github-com-blang-semver): Update to 3.8.0. Change-Id: I5f1eec936236e4f8984d6aabbab9a9ce99e291a3
* gnu: guile-scheme-json-rpc: Update to 0.4.5a.Ilya Chernyshov2024-03-15
| | | | | | | | | | | Shift some inputs requiring during runtime. * gnu/packages/guile-xyz.scm (guile-scheme-json-rpc): Update to 0.4.5a. [inputs]: Remove guile-srfi-145 and guile-srfi-180. [propagated-inputs]: Add guile-srfi-145 and guile-srfi-180. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Change-Id: If1c6ffaf6269c36ec857fd6f0aec444869468d24
* gnu: r-clusterprofiler: Update to 4.10.1.Ricardo Wurmus2024-03-15
| | | | | | * gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.10.1. Change-Id: I05b41c27d1e1ac8b2887845df5a4a75d45513929
* gnu: r-zlibbioc: Update to 1.48.2.Ricardo Wurmus2024-03-15
| | | | | | | * gnu/packages/bioconductor.scm (r-zlibbioc): Update to 1.48.2. [native-inputs]: Add r-knitr. Change-Id: Iee1c599473d30532660eb3770cf471ff979530dd
* gnu: r-stringdb: Update to 2.14.3.Ricardo Wurmus2024-03-15
| | | | | | | * gnu/packages/bioconductor.scm (r-stringdb): Update to 2.14.3. [propagated-inputs]: Remove r-rcurl; add r-httr. Change-Id: Id46873bee69cdd1047002db3505ff5420097e9e9
* gnu: r-gsva: Update to 1.50.1.Ricardo Wurmus2024-03-15
| | | | | | * gnu/packages/bioconductor.scm (r-gsva): Update to 1.50.1. Change-Id: Ib298992cb9ea4615fe3888e799c332e778a7b5be
* gnu: r-genomicfeatures: Update to 1.54.4.Ricardo Wurmus2024-03-15
| | | | | | | * gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.54.4. [propagated-inputs]: Remove r-rcurl; add r-httr and r-rjson. Change-Id: Iaed5177d04bc1c292dfad607f82401f45cfd02bc
* gnu: r-genomeinfodb: Update to 1.38.7.Ricardo Wurmus2024-03-15
| | | | | | | * gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.38.7. [propagated-inputs]: Remove r-rcurl. Change-Id: Ifc265a49ed946f3548ff279b930a8346c42025a8
* gnu: r-deseq2: Update to 1.42.1.Ricardo Wurmus2024-03-15
| | | | | | * gnu/packages/bioconductor.scm (r-deseq2): Update to 1.42.1. Change-Id: Ida0b7ad662c44b2b12af487bb6aa8364874ce3da
* gnu: r-biostrings: Update to 2.70.3.Ricardo Wurmus2024-03-15
| | | | | | * gnu/packages/bioconductor.scm (r-biostrings): Update to 2.70.3. Change-Id: I4a921a148d9f54be13967ed0e3092353a683f20f
* gnu: r-coregx: Update to 2.6.1.Ricardo Wurmus2024-03-15
| | | | | | * gnu/packages/bioconductor.scm (r-coregx): Update to 2.6.1. Change-Id: Icb0eb5a7697811f4272cda3d42d3c428bb59bd23
* gnu: r-asics: Update to 2.18.1.Ricardo Wurmus2024-03-15
| | | | | | * gnu/packages/bioconductor.scm (r-asics): Update to 2.18.1. Change-Id: I760771fd8fe57984ae1d0c96b72cb63562a1b43e
* gnu: alacritty: Fix loading of libxkbcommon-x11.so.Clément Lassieur2024-03-15
| | | | | | | | | | | | | | * gnu/packages/terminals.scm (alacritty)[arguments]: Handle libxkbcommon-x11.so in the ‘add-absolute-library-references’ phase. This fixes this error: thread 'main' panicked at /tmp/guix-build-alacritty-0.13.1.drv-0/source/guix-vendor/rust-xkbcommon-dl-0.4.1.tar.gz/src/x11.rs:59:28: Library libxkbcommon-x11.so could not be loaded. note: run with `RUST_BACKTRACE=1` environment variable to display a backtrace Change-Id: Ifbf19b4962bc3d9eeba6acdf32ca66b0c662f493 Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: python-pycurl: Disable one failing test.Sharlatan Hellseher2024-03-15
| | | | | | | | * gnu/packages/python-web.com (python-pycurl) [arguments] <#:test-flags>: Disable one more failing test which occurs on CI with CPU thread count more than 16. Change-Id: Ie772a7f096357b541cc8baa2349a524f05500e52
* Revert "gnu: linux-libre-documentation: Fix compilation."Leo Famulari2024-03-15
| | | | | | | | This bug was fixed upstream in 6.7.6. This reverts commit b6f82b9ef1a3d51a39995598eab9f793656e9123. Change-Id: Ia756a62b29ad1f342b0e7430a0cb88cc140974eb
* gnu: linux-libre 4.19: Update to 4.19.309.Leo Famulari2024-03-15
| | | | | | | * gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.309. (linux-libre-4.19-pristine-source): Update hash. Change-Id: If579a8179ded35cb4269e733bd96ee6f7c5d5360
* gnu: linux-libre 5.4: Update to 5.4.271.Leo Famulari2024-03-15
| | | | | | | * gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.271. (linux-libre-5.4-pristine-source): Update hash. Change-Id: Iaf7277f1f4ec3f106b8f0b82aef5a8be953972bd
* gnu: linux-libre 5.10: Update to 5.10.212.Leo Famulari2024-03-15
| | | | | | | * gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.212. (linux-libre-5.10-pristine-source): Update hash. Change-Id: I620729ec22cd67bbe22dc808ba6b4d74d2c0479d
* gnu: linux-libre 5.15: Update to 5.15.151.Leo Famulari2024-03-15
| | | | | | | * gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.151. (linux-libre-5.15-pristine-source): Update hash. Change-Id: I83ddffad4f1ce05723faa5d243e8345b21e39edb
* gnu: linux-libre 6.1: Update to 6.1.81.Leo Famulari2024-03-15
| | | | | | | * gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.81. (linux-libre-6.1-pristine-source, deblob-scripts-6.1): Update hashes. Change-Id: Iaec9f01a190d67bcab490c318456241ea8eabf22
* gnu: linux-libre 6.6: Update to 6.6.21.Leo Famulari2024-03-15
| | | | | | | * gnu/packages/linux.scm (linux-libre-6.6-version): Update to 6.6.21. (linux-libre-6.6-pristine-source): Update hash. Change-Id: Ic2f197add55f89196010c32957e10d3683cb8c01
* gnu: linux-libre: Update to 6.7.9.Leo Famulari2024-03-15
| | | | | | | * gnu/packages/linux.scm (linux-libre-6.7-version): Update to 6.7.9. (linux-libre-6.7-pristine-source): Update hash. Change-Id: I9d3e3907623b17f1a47b78ea00e9b7a5cf428ff6
* gnu: python-pycurl: Enable tests.Sharlatan Hellseher2024-03-14
| | | | | | | | | | | * gnu/packages/python-web.scm (python-pycurl): Enable most of the tests. [build-system]: Swap to pyproject-build-system. [arguments] <#:tests?>: Enable them. <#:test-arguments>: Disable some failing and hanging tests. [native-inputs]: Add python-flaky, python-pytest, and python-pytest-xdist. Change-Id: Ie222aa1111720f2e39b950b79d9e707401be7e8f
* gnu: packages: python-web: Sort use-modules alphabetically.Sharlatan Hellseher2024-03-14
| | | | | | | * gnu/packages/python-web.scm: Sort #:use-module alphabetically to ease maintenance. Change-Id: Id01b66ff7eaf610895c1275c2abfd9de2e537d8e
* gnu: Add python-zodb.Troy Figiel2024-03-14
| | | | | | * gnu/packages/python-web.scm (python-zodb): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
* gnu: Add python-zodbpickle.Troy Figiel2024-03-14
| | | | | | * gnu/packages/python-web.scm (python-zodbpickle): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
* gnu: Add python-zconfig.Troy Figiel2024-03-14
| | | | | | * gnu/packages/python-web.scm (python-zconfig): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
* gnu: Add morpheus.Ricardo Wurmus2024-03-14
| | | | | | | * gnu/packages/bioinformatics.scm (morpheus): New variable. Co-authored-by: Navid Afkhami <navid.afkhami@mdc-berlin.de> Change-Id: I4bf14414f497ff17690b1d26420d442d236fd6b5
* gnu: raspi-gpio: Make public.Jean-Pierre De Jesus DIAZ2024-03-14
| | | | | | | | | As it's unclear why it's not. * gnu/packages/raspberry-pi.scm (raspi-gpio): Make variable public. Change-Id: Iaf2789120a726d702d97c3a30a32e3b2cf5da3f1 Signed-off-by: Christopher Baines <mail@cbaines.net>