| Commit message (Collapse) | Author | Age |
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* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.34.4.
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* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.42.2.
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* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 1.34.1.
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* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.16.6.
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* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.28.11.
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* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.18.2.
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* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.28.2.
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* gnu/packages/man.scm (man-pages): Update to 5.00.
[source]: Re-format.
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* gnu/packages/mail.scm (dovecot): Update to 2.3.5.
[arguments]: Patch more tests in ‘patch-file-names’ phase, renamed from
‘patch-other-file-names’.
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* gnu/packages/mail.scm (dovecot)[source]: Hard-code NAME.
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* gnu/packages/ruby.scm (mruby): New variable.
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* gnu/packages/cran.scm (r-ggmap): Update to 3.0.0.
[propagated-inputs]: Add r-bitops, r-dplyr, r-glue, r-httr, r-magrittr,
r-purrr, r-stringr, r-tibble, and r-tidyr; remove r-geosphere, r-mapproj,
r-proto, and r-reshape2.
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* gnu/packages/cran.scm (r-readxl): Update to 1.3.0.
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* gnu/packages/cran.scm (r-sys): Update to 3.0.
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* gnu/packages/cran.scm (r-servr): Update to 0.13.
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* gnu/packages/cran.scm (r-flextable): Update to 0.5.1.
[propagated-inputs]: Add r-data-table, r-magick, and r-rlang; remove r-r6 and
r-stringr.
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* gnu/packages/cran.scm (r-proxy): Update to 0.4-23.
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* gnu/packages/cran.scm (r-haven): Update to 2.1.0.
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* gnu/packages/cran.scm (r-emdbook): Update to 1.3.11.
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* gnu/packages/cran.scm (r-rmysql): Update to 0.10.17.
[native-inputs]: Remove pkg-config.
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* gnu/packages/cran.scm (r-gower): Update to 0.2.0.
[native-inputs]: Remove r-knitr.
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* gnu/packages/cran.scm (r-ggsignif): Update to 0.5.0.
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* gnu/packages/cran.scm (r-jomo): Update to 2.6-7.
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* gnu/packages/cran.scm (r-mice): Update to 3.4.0.
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* gnu/packages/cran.scm (r-xfun): Update to 0.5.
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* gnu/packages/cran.scm (r-metap): Update to 1.1.
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* gnu/packages/cran.scm (r-ifultools): Update to 2.0-5.
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* gnu/packages/cran.scm (r-radiant-data): Update to 0.9.9.
[propagated-inputs]: Add r-stringi; remove r-summarytools.
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* gnu/packages/cran.scm (r-later): Update to 0.8.0.
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* gnu/packages/cran.scm (r-vim): Update to 4.8.0.
[propagated-inputs]: Add r-ranger.
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* gnu/packages/cran.scm (r-fnn): Update to 1.1.3.
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* gnu/packages/cran.scm (r-arules): Update to 1.6-3.
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* gnu/packages/cran.scm (r-zip): Update to 2.0.0.
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* gnu/packages/cran.scm (r-maptools): Update to 0.9-5.
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* gnu/packages/cran.scm (r-reticulate): Update to 1.11.1.
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* gnu/packages/cran.scm (r-officer): Update to 0.3.3.
[propagated-inputs]: Add r-rlang.
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* gnu/packages/cran.scm (r-prediction): Update to 0.3.6.2.
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* gnu/packages/cran.scm (r-abjutils): Update to 0.2.3.
[propagated-inputs]: Add r-furrr, r-future, r-readr, and r-rlang; remove
r-plyr.
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* gnu/packages/cran.scm (r-slam): Update to 0.1-45.
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* gnu/packages/cran.scm (r-hash): Update to 2.2.6.1.
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* gnu/packages/cran.scm (r-dvmisc): Update to 1.1.3.
[propagated-inputs]: Add r-cubature, r-data-table, r-dplyr, r-ggplot2,
r-mvtnorm, r-pracma, r-purrr, and r-survey.
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* gnu/packages/cran.scm (r-summarytools): Update to 0.9.2.
[propagated-inputs]: Add r-checkmate, r-dplyr, r-magick, and r-tidyr.
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* gnu/packages/cran.scm (r-multcomp): Update to 1.4-10.
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* gnu/packages/cran.scm (r-emmeans): Update to 1.3.3.
[propagated-inputs]: Add r-numderiv.
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* gnu/packages/cran.scm (r-afex): Update to 0.23-0.
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* gnu/packages/cran.scm (r-lmertest): Update to 3.1-0.
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* gnu/packages/cran.scm (r-ks): Update to 1.11.4.
[propagated-inputs]: Remove r-misc3d.
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* gnu/packages/cran.scm (r-tidytree): Update to 0.2.4.
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* gnu/packages/cran.scm (r-bigrquery): Update to 1.1.0.
[propagated-inputs]: Add r-bit64.
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* gnu/packages/cran.scm (r-gmp): Update to 0.5-13.4.
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