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* gnu: ruby: Remove custom 'rake gem' build phase from all gems.David Thompson2015-07-07
| | | | | | | * gnu/packages/ruby.scm (ruby-hoe, ruby-rake-compiler, ruby-net-http-persistent, ruby-minitest, ruby-minitest-sprint, ruby-minitest-bacon): Remove custom 'rake gem' build phase that is now handled automatically by the Ruby build system.
* gnu: samtools: Update to 1.2.Ricardo Wurmus2015-07-07
| | | | * gnu/packages/bioinformatics.scm (samtools): Update to 1.2.
* gnu: pari-gp: Update to 2.7.4.Andreas Enge2015-07-07
| | | | * gnu/packages/algebra.scm (pari-gp): Update to 2.7.4.
* gnu: icecat: Apply more libvpx-1.4 fixes.Mark H Weaver2015-07-07
| | | | | | | This is a followup to commit c803ffcb3a9d5669bf5bae62b66fa058d697545c. * gnu/packages/patches/icecat-libvpx-1.4.patch: Augment existing patch to include fixes for content/media/encoder/VP8TrackEncoder.cpp.
* gnu: icecat: Fix build against libvpx 1.4.Mark H Weaver2015-07-06
| | | | | | * gnu/packages/patches/icecat-libvpx-1.4.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/gnuzilla.scm (icecat)[source]: Add patch.
* gnu: gst-plugins-good: Disable rtprtx tests that frequently fail.Mark H Weaver2015-07-06
| | | | | * gnu/packages/gstreamer.scm (arguments): Add 'disable-failing-rtprtx-tests' phase.
* gnu: libvpx: Update to 1.4.0.Mark H Weaver2015-07-06
| | | | | | | | | * gnu/packages/patches/libvpx-fix-armhf-link.patch, gnu/packages/patches/libvpx-fix-ssse3-quantize.patch, gnu/packages/patches/libvpx-vp9-out-of-bounds-access.patch: Remove files. * gnu-system.am (dist_patch_DATA): Remove them. * gnu/packages/video.scm (libvpx): Update to 1.4.0. Remove patches. Update source URI.
* gnu: libwmf: Fix CVE-2006-3376, CVE-2009-1364, CVE-2015-{0848,4588,4695,4696}.Mark H Weaver2015-07-06
| | | | | | | | * gnu/packages/patches/libwmf-CVE-2006-3376.patch, gnu/packages/patches/libwmf-CVE-2009-1364.patch, gnu/packages/patches/libwmf-CVE-2015-0848+4588+4695+4696.patch: New files. * gnu-system.am (dist_patch_DATA): Add them. * gnu/packages/image.scm (libwmf)[source]: Add patches.
* gnu: libreoffice: Update to 4.4.4.3.Andreas Enge2015-07-06
| | | | * gnu/packages/libreoffice.scm (libreoffice): Update to 4.4.4.3.
* gnu: freeipmi: Update to 1.4.9.Ludovic Courtès2015-07-06
| | | | * gnu/packages/freeipmi.scm (freeipmi): Update to 1.4.9.
* gnu: gcal: Update to 4.Ludovic Courtès2015-07-06
| | | | * gnu/packages/gcal.scm (gcal): Update to 4.
* gnu: gxmessage: Update to 3.4.3.Ludovic Courtès2015-07-06
| | | | | * gnu/packages/gxmessage.scm (gxmessage): Update to 3.4.3. [inputs]: Use GTK+ instead of GTK+-2.
* gnu: guile-sdl: Update to 0.5.2.Ludovic Courtès2015-07-06
| | | | | * gnu/packages/sdl.scm (guile-sdl): Update to 0.5.2. [arguments]: Augment 'fix-env-and-path' phase to modify 'test/Makefile.in'.
* gnu: powertabeditor: Update to 2.0.0-alpha8.Ricardo Wurmus2015-07-05
| | | | * gnu/packages/music.scm (powertabeditor): Update to 2.0.0-alpha8.
* gnu: powertabeditor: Enable tests.Ricardo Wurmus2015-07-05
| | | | | * gnu/packages/music.scm (powertabeditor)[arguments]: Run "pte_tests" in "check" phase; add phase "fix-tests".
* gnu: Add LibreSSL.Andreas Enge2015-07-05
| | | | * gnu/packages/tls.scm (libressl): New variable.
* gnu: Fix ambiguity between openssl package and license in tls module.Andreas Enge2015-07-05
| | | | * gnu/packages/tls.scm: Prefix imported licenses.
* gnu: icecat: Add support for WebGL, CUPS, Hunspell, startup-notification, etc.Mark H Weaver2015-07-05
| | | | | | | | | | | | | | | | | | Also remove most bundled libraries from the source, add comments about libraries yet to be unbundled, explicitly link libxul.so with libraries that might try (and fail) to dlopen, and remove the h264parse gstreamer module from the blacklist. * gnu/packages/gnuzilla.scm (icecat)[source]: Add snippet. [inputs]: Add cups, gdk-pixbuf, glib, hunspell, libcanberra, libgnome, libxinerama, libxscrnsaver, mit-krb5, and startup-notification. [arguments]<#:configure-flags>: add "--enable-default-toolkit=cairo-gtk2", "--enable-pango", "--enable-gio", "--enable-svg", "--enable-canvas", "--enable-mathml", "--enable-startup-notification", "--disable-gnomevfs", "--disable-gconf", "--disable-gnomeui", and "--enable-system-hunspell". Remove outdated comment about "--with-system-bz2" not being used. <#:phases>: Use 'modify-phases'. Add 'remove-h264parse-from-blacklist' and 'arrange-to-link-libxul-with-libraries-it-might-dlopen' phases.
* gnu: Move content of openssl module into tls module.Andreas Enge2015-07-05
| | | | | | | | | | | | | | * gnu/packages/openssl.scm (openssl, perl-net-ssleay): Move to... * gnu/packages/tls.scm: ...here. * gnu/packages/openssl.scm: Delete file. * gnu-system.am (GNU_SYSTEM_MODULES): Unregister deleted file. * gnu/packages/{admin.scm, bittorrent.scm, certs.scm, ci.scm, cyrus-sasl.scm, databases.scm, dns.scm, ebook.scm, enlightenment.scm, gnunet.scm, libreoffice.scm, links.scm, mail.scm, messaging.scm, networking.scm, ntp.scm, openldap.scm, package-management.scm, pdf.scm, python.scm, qt.scm, rdesktop.scm, rdf.scm, ruby.scm, ssh.scm, synergy.scm, tor.scm, version-control.scm, video.scm, vpn.scm, w3m.scm, web.scm, weechat.scm, xiph.scm}: Adapt module import.
* gnu: Rename module gnutls to tls.Andreas Enge2015-07-05
| | | | | | | | | | | | * gnu/packages/gnutls.scm: Rename to... * gnu/packages/tls.scm: ... this. Change module name accordingly. * gnu/packages/{admin.scm, cups.scm, curl.scm, dc.scm, dns.scm, emacs.scm, ftp.scm, gnome.scm, gnunet.scm, gnupg.scm, gsasl.scm, lynx.scm, mail.scm, messaging.scm, package-management.scm, shishi.scm, task-management.scm, version-control.scm, video.scm, vpn.scm, webkit.scm, weechat.scm, wget.scm, wine.scm, xml.scm}: Adapt module import to new name. * gnu-system.am (GNU_SYSTEM_MODULES): Rename gnutls module to tls.
* gnu: avidemux: Drop version 2.5.Andreas Enge2015-07-05
| | | | * gnu/packages/video.scm (avidemux-2.5): Delete variable.
* gnu: Add prodigal.Ben Woodcroft2015-07-05
| | | | * gnu/packages/bioinformatics.scm (prodigal): New variable.
* gnu: shogun: Build with install RPATH.Ricardo Wurmus2015-07-04
| | | | | * gnu/packages/bioinformatics.scm (shogun)[arguments]: Add configure flag to build with install RPATH.
* gnu: englightenment: Use https URLs.Ludovic Courtès2015-07-04
| | | | | | * gnu/packages/enlightenment.scm (efl, elementary, emotion-generic-players, terminology, enlightenment): Use https instead of http since the latter redirects to the former.
* gnu: enlightenment: Update to 0.19.5.Efraim Flashner2015-07-04
| | | | * gnu/packages/enlightenment.scm (enlightenment): Update to 0.19.5.
* gnu: emotion-generic-loaders: Update to 1.14.0.Efraim Flashner2015-07-04
| | | | | * gnu/packages/enlightenment.scm (emotion-generic-loaders): Update to 1.14.0.
* gnu: evas-generic-loaders: Update to 1.14.0.Efraim Flashner2015-07-04
| | | | | * gnu/packages/enlightenment.scm (evas-generic-loaders): Update to 1.14.0.
* gnu: elementary: Update to 1.14.2.Efraim Flashner2015-07-04
| | | | * gnu/packages/enlightenment.scm (elementary): Update to 1.14.2.
* gnu: efl: Update to 1.14.2.Efraim Flashner2015-07-04
| | | | * gnu/packages/enlightenment.scm (efl): Update to 1.14.2.
* gnu: Add ruby-rake-compiler.pjotrp2015-07-04
| | | | * gnu/packages/ruby.scm (ruby-rake-compiler): New variable.
* gnu: eigen: Update to 3.2.5.Ricardo Wurmus2015-07-04
| | | | * gnu/packages/algebra.scm (eigen): Update to 3.2.5.
* gnu: icecat: Fix CVE-2015-{2722,2724,2728,2733,2735,2736,2738,2739,2740,2743}.Mark H Weaver2015-07-04
| | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/icecat-CVE-2015-2722-pt1.patch, gnu/packages/patches/icecat-CVE-2015-2722-pt2.patch, gnu/packages/patches/icecat-CVE-2015-2724-pt1.patch, gnu/packages/patches/icecat-CVE-2015-2724-pt2.patch, gnu/packages/patches/icecat-CVE-2015-2724-pt3.patch, gnu/packages/patches/icecat-CVE-2015-2724-pt4.patch, gnu/packages/patches/icecat-CVE-2015-2728-pt1.patch, gnu/packages/patches/icecat-CVE-2015-2728-pt2.patch, gnu/packages/patches/icecat-CVE-2015-2733-pt1.patch, gnu/packages/patches/icecat-CVE-2015-2733-pt2.patch, gnu/packages/patches/icecat-CVE-2015-2735.patch, gnu/packages/patches/icecat-CVE-2015-2736.patch, gnu/packages/patches/icecat-CVE-2015-2738.patch, gnu/packages/patches/icecat-CVE-2015-2739.patch, gnu/packages/patches/icecat-CVE-2015-2740.patch, gnu/packages/patches/icecat-CVE-2015-2743.patch: New files. * gnu-system.am (dist_patch_DATA): Add them. * gnu/packages/gnuzilla.scm (icecat)[source]: Add patches.
* gnu: unrtf: Fix download location.Andreas Enge2015-07-03
| | | | * gnu/packages/unrtf.scm (unrtf): Fix download location.
* gnu: r: Replace "atlas" with "openblas".Ricardo Wurmus2015-07-03
| | | | * gnu/packages/statistics.scm (r)[inputs]: Replace "atlas" with "openblas".
* gnu: gnutls: Move man3 pages to "doc" output.Ludovic Courtès2015-07-03
| | | | * gnu/packages/gnutls.scm (gnutls)[arguments]: Add #:phases.
* gnu: qt-4: Remove reference from "out" to "doc".Ludovic Courtès2015-07-03
| | | | | * gnu/packages/qt.scm (qt-4)[arguments]: Remove '-docdir' configure flag. Add 'move-doc' phase.
* gnu: qt-4: Use a more standard directory layout.Ludovic Courtès2015-07-03
| | | | | * gnu/packages/qt.scm (qt-4)[arguments]: Pass -datadir, -importdir, -plugindir, and -translationdir.
* gnu: qt-4: Use 'modify-phases'.Ludovic Courtès2015-07-03
| | | | | * gnu/packages/qt.scm (qt-4)[arguments]: Use 'modify-phases' instead of 'alist-replace'.
* gnu: cups-filter: Install backends and filters under lib/cups.Ludovic Courtès2015-07-03
| | | | | | | | | | This ensures that they are stripped during the 'strip' phase, thereby removing references to GCC and linux-libre-headers that would otherwise be found in debugging symbols. * gnu/packages/cups.scm (cups-filters)[source]: Change pkgbackenddir and pkgfilterdir to $(PREFIX)/lib/cups/{filter,backend}. (cups)[arguments]: Adjust accordingly.
* gnu: mysql: Remove unnecessary binaries.Ludovic Courtès2015-07-03
| | | | | | | This saves ~42 MiB on x86_64. * gnu/packages/databases.scm (mysql)[arguments]: Add 'remove-extra-binaries' phase.
* gnu: mysql: Strip references and GCC and other build-time dependencies.Ludovic Courtès2015-07-03
| | | | | * gnu/packages/databases.scm (mysql)[arguments]: Add 'strip-extra-references' phase.
* gnu: mutt: Don't retain reference to GCC.Ludovic Courtès2015-07-03
| | | | | | * gnu/packages/patches/mutt-store-references.patch: New file. * gnu/packages/mail.scm (mutt)[source]: Use it. * gnu-system.am (dist_patch_DATA): Add it.
* gnu: ghostscript: Add "doc" output.Ludovic Courtès2015-07-03
| | | | | | * gnu/packages/ghostscript.scm (ghostscript)[source](snippet): New field. [outputs]: New field. [arguments]: Add 'remove-doc-reference' phase.
* gnu: gnupg: Enable TLS support.Mark H Weaver2015-07-02
| | | | | | * gnu/packages/gnupg.scm (gnupg)[native-inputs]: Add pkg-config. [inputs]: Add gnutls. (gnupg-2.0, gnupg-1)[native-inputs]: Override inherited value to be '().
* gnu: gnupg: Update to 2.1.6.Mark H Weaver2015-07-02
| | | | * gnu/packages/gnupg.scm (gnupg): Update to 2.1.6.
* gnu: Add WarpedLMM.Ricardo Wurmus2015-07-02
| | | | * gnu/packages/bioinformatics.scm (python2-warpedlmm): New variable.
* gnu: r: Set default pager.Ricardo Wurmus2015-07-02
| | | | | * gnu/packages/statistics.scm (r)[arguments]: Add phase "set-default-pager" to avoid "false" as a default pager.
* environment: Define 'GUIX_ENVIRONMENT'.Ludovic Courtès2015-07-01
| | | | | | | * guix/scripts/environment.scm (create-environment): Define 'GUIX_ENVIRONMENT'. * doc/guix.texi (Invoking guix environment): Document it. * gnu/system/shadow.scm (default-skeletons): Adjust 'PS1' depending on whether 'GUIX_ENVIRONMENT' is defined.
* gnu: powertabeditor: Replace "gcc" with "libiberty".Ricardo Wurmus2015-07-01
| | | | | * gnu/packages/music.scm (powertabeditor)[inputs]: Replace "gcc" with "libiberty".
* gnu: Add Hydrogen.Ricardo Wurmus2015-07-01
| | | | * gnu/packages/music.scm (hydrogen): New variable.
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