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* gnu: Add pv.Claes Wallin2015-06-27
| | | | | | | * gnu/package/pv.scm (pv): New file. * gnu-system.am (GNU_SYSTEM_MODULES): Add it. Signed-off-by: Alex Kost <alezost@gmail.com>
* gnu: Refer to 'gcc' instead of 'gcc-4.9'.Ludovic Courtès2015-06-26
| | | | | | | | | | * gnu/packages/commencement.scm (gcc-boot0, cross-gcc-wrapper, libstdc++, gcc-final): Refer to GCC instead of GCC-4.9. * gnu/packages/cross-base.scm (%xgcc): New variable. (cross-gcc-arguments, cross-gcc): Refer to %XGCC instead of GCC-4.9. * gnu/packages/llvm.scm (clang-from-llvm): Refer to GCC instead of GCC-4.9. * gnu/packages/make-bootstrap.scm (package-with-relocatable-glibc, %gcc-static, %gcc-stripped): Likewise.
* gnu: youtube-dl: Update to 2015.06.25.Ludovic Courtès2015-06-26
| | | | * gnu/packages/video.scm (youtube-dl): Update to 2015.06.25.
* gnu: Add python2-fastlmm.Ricardo Wurmus2015-06-26
| | | | * gnu/packages/python.scm (python2-fastlmm): New variable.
* gnu: Add python2-pysnptools.Ricardo Wurmus2015-06-26
| | | | * gnu/packages/python.scm (python2-pysnptools): New variable.
* gnu: nettle: Disable ifunc method of library initialization.Mark H Weaver2015-06-25
| | | | | * gnu/packages/nettle.scm (nettle)[arguments]: Add 'disable-ifunc-init-method' phase.
* gnu: Replace versioned gfortran inputs with just "gfortran".Ricardo Wurmus2015-06-25
| | | | | | | | | | | | | | | * gnu/packages/julia.scm (julia)[inputs]: Replace "gfortran-4.8" with "gfortran". * gnu/packages/machine-learning.scm (randomjungle)[native-inputs]: Likewise. * gnu/packages/maths.scm (arpack-ng, lapack, petsc, superlu) (superlu-dist, openblas, openspecfun, atlas)[inputs]: Likewise. (octave)[native-inputs]: Likewise. (gmsh)[propagated-inputs]: Likewise. * gnu/packages/mpi.scm (openmpi)[inputs]: Likewise. * gnu/packages/python.scm (python-numpy-bootstrap)[native-inputs]: Likewise. * gnu/packages/python.scm (python-scipy)[native-inputs]: Likewise. * gnu/packages/statistics.scm (r)[inputs]: Replace "gfortran-4.9" with "gfortran".
* gnu: Add default GCC and default gfortran.Ricardo Wurmus2015-06-25
| | | | | * gnu/packages/gcc.scm (gcc): New variable. * gnu/packages/gcc.scm (gfortran): New variable.
* gnu: gstreamer: Add search path specification for 'GST_PLUGIN_SYSTEM_PATH'.宋文武2015-06-25
| | | | | | | This reverts commit e53fc0c8a, which add it wrongly to gst-plugins-base. * gnu/packages/gstreamer.scm (gstreamer)[native-search-paths]: New field. (gst-plugins-base)[native-search-paths]: Remove.
* linux-initrd: Produce cpio archives with zeroed timestamps, etc.Ludovic Courtès2015-06-24
| | | | | | * guix/cpio.scm (file->cpio-header*): New procedure. * gnu/build/linux-initrd.scm (write-cpio-archive): Add #:file->header argument to 'cpio:write-cpio-archive'.
* linux-initrd: Populate cpio archives in a deterministic order.Ludovic Courtès2015-06-24
| | | | | * gnu/build/linux-initrd.scm (write-cpio-archive)[files]: Use 'sort' instead of 'reverse'.
* linux-initrd: Use (guix cpio) instead of GNU cpio.Ludovic Courtès2015-06-24
| | | | | | | | | * gnu/build/linux-initrd.scm (write-cpio-archive): Remove 'open-pipe*' and related calls. Compute list of files in 'files' variable. Use 'cpio:write-cpio-archive'. Remove #:cpio parameter. (build-initrd): Remove #:cpio parameter. * gnu/system/linux-initrd.scm (expression->initrd): Likewise, and adjust BUILDER accordingly. Add (guix cpio) to #:modules.
* gnu: pius: Depend on GnuPG 2.0 rather than 2.1.Ludovic Courtès2015-06-24
| | | | * gnu/packages/gnupg.scm (pius)[inputs]: Change GNUPG to GNUPG-2.0.
* gnu: julia: Use modify-phases syntax and add return values.Ricardo Wurmus2015-06-24
| | | | | * gnu/packages/julia.scm (julia)[arguments]: Use modify-phases syntax for build phases and add missing return values.
* gnu: r: Use gfortran-4.9.Ricardo Wurmus2015-06-24
| | | | | * gnu/packages/statistics.scm (r)[inputs]: Replace gfortran-4.8 with gfortran-4.9.
* gnu: Add gfortran 4.9.Ricardo Wurmus2015-06-24
| | | | * gnu/packages/gcc.scm (gfortran-4.9): New variable.
* gnu: Add hmmer.Ben Woodcroft2015-06-24
| | | | * gnu/packages/bioinformatics.scm (hmmer): New variable.
* gnu: screen: Install the Info manual.宋文武2015-06-24
| | | | * gnu/packages/screen.scm (screen)[native-inputs]: New field.
* gnu: Add setBfree.Ricardo Wurmus2015-06-23
| | | | * gnu/packages/audio.scm (setbfree): New variable.
* gnu: ftgl: Propagate "freetype".Ricardo Wurmus2015-06-23
| | | | | * gnu/packages/gl.scm (ftgl)[inputs,propagated-inputs]: Move "freetype" from "inputs" to "propagated-inputs".
* gnu: faust: Remove prebuilt library in snippet.Ricardo Wurmus2015-06-23
| | | | | | * gnu/packages/audio.scm (faust)[arguments]: Remove the phase 'remove-prebuilt-library... * gnu/packages/audio.scm (faust)[origin]: ...and move it here as a snippet.
* gnu: star: Update to 2.4.2a.Ricardo Wurmus2015-06-23
| | | | * gnu/packages/bioinformatics.scm (star): Update to 2.4.2a.
* gnu: miso: Install executables.Ricardo Wurmus2015-06-23
| | | | | | | * gnu/packages/bioinformatics.scm (miso)[source]: Patch "setup.py" to use "setuptools" so that executables are built. * gnu/packages/bioinformatics.scm (miso)[native-inputs]: Add "python2-mock" and "python2-pytz".
* gnu: Add idr.Ricardo Wurmus2015-06-23
| | | | * gnu/packages/bioinformatics.scm (idr): New variable.
* gnu: linux-libre: Update to 4.1.Mark H Weaver2015-06-23
| | | | | | | * gnu/packages/linux.scm (linux-libre): Update to 4.1. [inputs]: Remove gcc-4.9, since it is now the default compiler. * gnu/packages/linux-libre-i686.conf, gnu/packages/linux-libre-x86_64.conf: Update to 4.1 configs from <https://jxself.org/git/?p=kernel-configs.git>.
* gnu: Add gnome-klotski.宋文武2015-06-23
| | | | * gnu/packages/gnome.scm (gnome-klotski): New variable.
* system: emacs-site-file: Use 'geiser-install to load geiser.宋文武2015-06-23
| | | | | | | Suggested by Alex Kost <alezost@gmail.com>. * gnu/system.scm (emacs-site-file): Use 'geiser-install to load geiser instead of setting 'geiser-guile-load-path' manually.
* gnu: Add gom.Mark H Weaver2015-06-23
| | | | * gnu/packages/gnome.scm (gom): New variable.
* gnu: Add clutter-gst.Mark H Weaver2015-06-23
| | | | * gnu/packages/gnome.scm (clutter-gst): New variable.
* gnu: Add clutter-gtk.Mark H Weaver2015-06-23
| | | | * gnu/packages/gnome.scm (clutter-gtk): New variable.
* gnu: Add clutter.Mark H Weaver2015-06-23
| | | | * gnu/packages/gnome.scm (clutter): New variable.
* gnu: Add cogl.Mark H Weaver2015-06-23
| | | | * gnu/packages/gnome.scm (cogl): New variable.
* gnu: sipwitch: Update to 1.9.8.Andreas Enge2015-06-23
| | | | * gnu/packages/telephony.scm (sipwitch): Update to 1.9.8.
* gnu: commencement: Make a few variables private.Ludovic Courtès2015-06-22
| | | | | | | This removes ambiguity warnings when installing these packages. * gnu/packages/commencement.scm (glibc-final, gcc-final, glibc-utf8-locales-final): Make private.
* gnu: imagemagick: Do not retain reference to "doc" output.Ludovic Courtès2015-06-22
| | | | | * gnu/packages/imagemagick.scm (imagemagick)[arguments]: Use 'modify-phases'. Add 'strip-configure-xml' phase.
* gnu: ucommon: Update to 6.3.4.Andreas Enge2015-06-22
| | | | * gnu/packages/telephony.scm (ucommon): Update to 6.3.4.
* Merge branch 'master' into core-updatesMark H Weaver2015-06-21
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| * gnu: Add fasttree.Ben Woodcroft2015-06-21
| | | | | | | | * gnu/packages/bioinformatics.scm (fasttree): New variable.
| * gnu: ffmpeg: Update to 2.7.1.Mark H Weaver2015-06-21
| | | | | | | | * gnu/packages/video.scm (ffmpeg): Update to 2.7.1.
| * gnu: totem-pl-parser: Add gobject-introspection support.Mark H Weaver2015-06-20
| | | | | | | | | | * gnu/packages/gnome.scm (totem-pl-parser)[native-inputs]: Add gobject-introspection.
| * gnu: totem-pl-parser: Move glib, gmime, and libxml2 to propagated-inputs.Mark H Weaver2015-06-20
| | | | | | | | | | | | * gnu/packages/gnome.scm (totem-pl-parser)[inputs]: Move glib, gmime, and libxml2 to ... [propagated-inputs]: ... here.
| * gnu: clang: Build without debugging symbols.Ludovic Courtès2015-06-19
| | | | | | | | * gnu/packages/llvm.scm (clang-from-llvm)[arguments]: Add #:build-type.
| * gnu: clang: Allow 'clang' to link executables.Ludovic Courtès2015-06-19
| | | | | | | | | | | | | | | | | | * gnu/packages/patches/clang-libc-search-path.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/llvm.scm (clang-from-llvm)[source]: Use it. [inputs]: Add "gcc-lib". [arguments]. Add -DGCC_INSTALL_PREFIX and -DC_INCLUDE_DIRS to #:configure-flags. Add #:phases argument.
| * gnu: clang: Add search path specifications.Ludovic Courtès2015-06-19
| | | | | | | | * gnu/packages/llvm.scm (clang-from-llvm)[native-search-paths]: New field.
| * gnu: Add libstdc++ as a standalone package.Ludovic Courtès2015-06-19
| | | | | | | | | | | | * gnu/packages/gcc.scm (make-libstdc++): New procedure. (libstdc++-4.9): New variable. * gnu/packages/commencement.scm (libstdc++): Add TODO comment.
| * gnu: Add ruby 2.1.6pjotrp2015-06-19
| | | | | | | | * gnu/packages/ruby.scm (ruby-2.1): New variable.
| * gnu: Add control group file systems.David Thompson2015-06-19
| | | | | | | | | | * gnu/system/file-systems.scm (%control-groups): New variable. (%base-file-system): Include control group file systems.
| * gnu: Make 'mount' interface in static Guile consistent with Guix API.David Thompson2015-06-19
| | | | | | | | | | | | | | | | | | | | Rather than expecting a pointer, the version of 'mount' in guile-static-stripped now takes a string for the 'options' argument, just like the 'mount' procedure in (guix build syscalls). * gnu/packages/patches/guile-linux-syscalls.patch (mount): Expect a string or #f for 'options' argument. * gnu/build/file-systems.scm (mount-file-system): Use new 'mount' interface.
| * gnu: Add Raul.Ricardo Wurmus2015-06-19
| | | | | | | | * gnu/packages/audio.scm (raul): New variable.
* | gnu: jemalloc: Build with gcc-4.8 on i686.Mark H Weaver2015-06-21
| | | | | | | | | | * gnu/packages/jemalloc.scm (jemalloc)[native-inputs]: When compiling natively on i686, add gcc-4.8.
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