| Commit message (Collapse) | Author | Age |
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* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.16.1.
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* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.16.1.
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* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.16.1.
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* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.46.3.
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* gnu/packages/bioinformatics.scm (r-edger): Update to 3.32.1.
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* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.24.1.
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* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.28.1.
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* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.24.3.
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* gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.52.1.
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* gnu/packages/bioinformatics.scm (r-genefilter): Update to 1.72.1.
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* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.12.3.
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* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.2.1.
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* gnu/packages/bioconductor.scm (r-scran): Update to 1.18.5.
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* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.0.4.
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* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.6.4.
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* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.12.1.
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* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.18.1.
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* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.52.1.
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* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.42.1.
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* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.26.1.
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* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.2.1.
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* gnu/packages/bioconductor.scm (r-multidataset): Update to 1.18.1.
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* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.18.1.
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* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.10.2.
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* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.2.1.
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* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.0.13.
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Fixes CVE-2020-{36221,36222,36223,36224,36225,36226,36226,36228,36229,36230}.
* gnu/packages/openldap.scm (openldap-2.4.57): New variable.
(openldap)[replacement]: New field.
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* gnu/packages/xdisorg.scm (wob): New variable.
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* gnu/packages/xdisorg.scm (gammastep): New variable.
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* gnu/packages/fonts.scm (font-cozette): New variable.
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* gnu/packages/python-xyz.scm (python-crayons): New variable.
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* gnu/packages/dictionaries.scm (grammalecte): Update to 2.1.0.
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* gnu/packages/file-systems.scm (python-dropbox): Update to 11.2.0.
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* gnu/packages/file-systems.scm (dbxfs): Update to 1.0.51.
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* gnu/packages/text-editors.scm (texmacs): Update to 1.99.18.
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* gnu/packages/tex.scm (lyx): Update to 2.3.6.1.
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* gnu/packages/finance.scm (python-duniterpy): Update to 0.61.0.
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* gnu/packages/music.scm (musescore): Update to 3.6.2.
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* gnu/packages/emacs-xyz.scm (emacs-ebdb): Update to 0.6.22.
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* gnu/packages/visidata.scm (visidata): Update to 2.2.1.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
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* gnu/packages/web.scm (esbuild): Update to 0.8.43.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/emacs-xyz.scm (emacs-ztree): Update to 20210210.
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* gnu/packages/gnome-xyz.scm (tiramisu): New variable.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
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* gnu/packages/ssh.scm (dropbear)[source]: Add snippet to remove
libtommath, libtomcrypt.
[arguments]: Add configure-flag to not use bundled libraries.
[inputs]: Add libtomcrypt, libtommath.
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* gnu/packages/multiprecision.scm (libtomcrypt)[arguments]: Adjust
'prepare-build phase to patch libtomcrypt.pc to link tommath.
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* gnu/packages/multiprecision.scm (libtomcrypt): New variable.
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* gnu/packages/compression.scm (lz4)[arguments]: Set "#:parallel-tests?"
keyword argument to "#f".
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
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* gnu/packages/networking.scm (miredo)[arguments]: Add "--localstatedir=/var"
to #:configure-flags and add 'do-not-create-/run phase to #:phases to remove
code that tries to create a directory inside "@localstatedir@" during install.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
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* gnu/packages/vim.scm (vim)[arguments]: Add "CFLAGS=-D_REENTRANT" to
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
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* gnu/services/xorg.scm (xorg-server-service-type): New service type.
(xorg-server-profile-service): New procedure.
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