| Commit message (Collapse) | Author | Age |
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* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.22.1.
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* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.32.2.
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* gnu/packages/bioconductor.scm (r-biocset): Update to 1.8.1.
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* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.12.2.
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* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.18.0.
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* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.8.1.
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* gnu/packages/bioconductor.scm (r-geoquery): Update to 2.62.1.
[propagated-inputs]: Add r-r-utils.
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* gnu/packages/bioconductor.scm (r-icobra): Update to 1.22.1.
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* gnu/packages/bioconductor.scm (r-ggtree): Update to 3.2.1.
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* gnu/packages/bioconductor.scm (r-treeio): Update to 1.18.1.
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* gnu/packages/bioconductor.scm (r-systempiper): Update to 2.0.1.
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* gnu/packages/bioconductor.scm (r-msnbase): Update to 2.20.1.
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* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.18.2.
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* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.30.2.
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* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.56.2.
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* gnu/packages/networking.scm (wireshark): Update to 3.4.10.
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* gnu/packages/emacs-xyz.scm (emacs-elfeed-score): Update to 1.2.0.
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* gnu/packages/coq.scm (coq-stdpp)[arguments]<#:make-flags>: Set install
destination.
<#:phases>: Remove replace 'install.
Signed-off-by: Julien Lepiller <julien@lepiller.eu>
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* gnu/packages/coq.scm (coq-equations)[arguments]<#:make-flags>: Set install
destination.
<#:phases>: Remove replace 'install.
Signed-off-by: Julien Lepiller <julien@lepiller.eu>
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* gnu/packages/coq.scm (coq-autosubst)[arguments]<#:make-flags>: Set install
destination.
<#:phases>: Remove replace 'install.
Signed-off-by: Julien Lepiller <julien@lepiller.eu>
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* gnu/packages/coq.scm (coq-mathcomp)[arguments]<#:make-flags>: Set install
destination.
<#:phases>: Remove replace 'install.
Signed-off-by: Julien Lepiller <julien@lepiller.eu>
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* gnu/packages/coq.scm (coq-semantics): New variable.
Signed-off-by: Julien Lepiller <julien@lepiller.eu>
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* gnu/packages/perl.scm (perl-tie-handle-offset)[description]: Fix "This
module" typo.
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* gnu/packages/perl.scm (perl-business-ismn)[description]: Fix "This module"
typo.
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* gnu/packages/perl.scm (perl-business-issn)[description]: Fix "This module"
typo.
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* gnu/packages/perl.scm (perl-business-isbn)[description]: Fix "This module"
typo.
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* gnu/packages/perl-check.scm (perl-test-dir)[description]: Fix "This module"
typo.
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* gnu/packages/python-xyz.scm (python-sgmllib3k)[description]: Fix "This
package" typo.
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* gnu/packages/crates-io.scm (rust-fever-api-0.2)[description]: Fix "This
package" typo.
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* gnu/packages/perl-check.scm (perl-test-nowarnings)[description]: Fix "This
module" typo.
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* gnu/packages/cups.scm (foo2zjs)[home-page]: Link to the Web Archive'd
URL.
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* gnu/packages/scsi.scm (sg3-utils)[arguments]: Add "--disable-static"
to #:configure-flags.
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* gnu/packages/scsi.scm (sg3-utils): Update to 1.47.
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* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for M96.
(%chromium-version): Set to 96.0.4664.45.
(%ungoogled-origin, ungoogled-chromium): Update hashes.
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* gnu/packages/bittorrent.scm (libtorrent-rasterbar): Update to 1.2.14.
[source](uri): Adjust tag name.
[build-system]: Change to CMAKE-BUILD-SYSTEM.
[arguments]: Adjust accordingly. Override the check phase to fake the time
for one test, and disable another.
[native-inputs]: Add LIBFAKETIME.
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* gnu/packages/version-control.scm (rcs-blame): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/version-control.scm (rcs): Install rcsfreeze.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/bootloader.scm (%warn-target-field-deprecation): Remove it.
* gnu/bootloader.scm (warn-target-field-deprecation): Use
define-with-syntax-properties.
* gnu/system.scm (ensure-setuid-program-list): Ditto. Also rename the
'location' variable to 'properties'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/web.scm (tidy-html): Update to 5.8.0.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/xfce.scm (xfce4-whiskermenu-plugin): Update to 2.6.1.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/xfce.scm (ristretto): Update to 0.12.0.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/xfce.scm (xfce4-cpugraph-plugin): Update to 1.2.5.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/haskell-apps.scm (shellcheck): Update to 0.8.0.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/perl.scm (perl-inline-c)[arguments]<#:phases>{patch-paths}: New
phase.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/services/docker.scm (docker-configuration): Add the field
(docker-shepherd-service): Pass the list of defined variables to
make-forkexec-constructor.
* doc/guix.texi (Miscellaneous Services): Update doc.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/perl.scm (perl-log-message)[description]: Correctly use "lets
you".
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* gnu/packages/emacs-xyz.scm (emacs-eldev): Update to 0.10.
[arguments]: Enable some tests, disable some others. Remove #t at the end of phases.
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* gnu/home/services.scm (compute-on-first-login-script): Fix spelling of
"appropriate".
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* gnu/packages/python-xyz.scm (python-numcodecs)[source]: Add snippet to
remove bundled c-blosc sources and pre-built Cython files.
[arguments]: Add build phase 'disable-avx2 and 'unbundle; replace 'check phase
to run pytest; disable tests.
[inputs]: Add c-blosc, lz4, zlib, and zstd.
[native-inputs]: Add python-cython.
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* gnu/packages/compression.scm (c-blosc)[inputs]: Add lz4, snappy, zlib, and
zstd.
[arguments]: Disable building with AVX2 instructions; prefer our compression
packages over bundled sources.
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