| Commit message (Collapse) | Author | Age |
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* gnu/system/linux-initrd.scm (base-initrd): Add nvme to linux-modules.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/bioinformatics.scm (blast+): Update to 2.4.0.
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* gnu/packages/maths.scm (ceres)[arguments]: Remove -DMINIGLOG=ON.
[inputs]: Add GLOG.
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* gnu/packages/logging.scm (glog): New variable.
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Fixes <http://bugs.gnu.org/23744>.
Reported by Jovany Leandro G.C <bit4bit@riseup.net>
and Jelle Licht <jlicht@fsfe.org>.
* gnu/packages/node.scm (node)[arguments]: Replace 'patch-shebangs'
phase.
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* gnu/packages/graphics.scm (openexr)[source](snippet): Modify
IlmImf/Makefile.in so that it installs 'ImfStdIO.h'.
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* gnu/packages/patches/avrdude-fix-libusb.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/flashing-tools.scm (avrdude)[source]: Remove patch.
[inputs]: Replace "libusb" with "libusb-compat".
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* gnu/packages/bioinformatics.scm (star): Update to 2.5.2a.
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* gnu/packages/bioinformatics.scm (htslib): Update to 1.3.1.
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* gnu/packages/bioinformatics.scm (seek): New variable.
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* gnu/packages/bioinformatics.scm (mafft): Update to 7.299.
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This reverts commit 763a8e6e235cf464306214349dad21979f2645f0.
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* gnu/packages/bioinformatics.scm (metabat): Update to 0.26.3.
[arguments]: Update include and linking paths accordingly.
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* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.9.
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* gnu/packages/statistics.scm (r)[inputs]: Remove cairo, add pango.
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* gnu/tests/base.scm (%avahi-os): New variable.
(run-nss-mdns-test): New procedure.
(%test-nss-mdns): New variable.
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* gnu/services/avahi.scm (<avahi-configuration>)[debug?]: New field.
(avahi-shepherd-service): Honor it.
(avahi-service): Add #:debug? and honor it.
* doc/guix.texi (Networking Services): Adjust accordingly.
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This makes sure the service's 'start' finishes when avahi-daemon is
ready to process requests.
* gnu/services/avahi.scm (avahi-shepherd-service): Use --daemonize
instead of --syslog and add #:pid-file.
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* gnu/tests.scm (<marionette-configuration>): New record type.
(marionette-shepherd-service): Argument now is a <marionette-configuration>.
(marionette-operating-system): Adjust accordingly. Add #:requirements
parameter and honor it.
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* gnu/tests/base.scm (run-basic-test)["host name resolution",
"host not found"]: New tests.
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* gnu/services/base.scm (syslog-service-type): Export.
(urandom-seed-service-type): Export.
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* gnu/services/base.scm (nscd-shepherd-service): Pass #:pid-file.
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* gnu/packages/xfce.scm (orage): New variable.
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* gnu/packages/python.scm (python2-orator)[native-inputs]: Move
python2-ipaddress ...
[propagated-inputs]: to here.
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* gnu/packages/python.scm (python-orator)[native-inputs]: Move
python-arrow, python-blinker, python-cleo, python-fake-factory,
python-inflection, python-lazy-object-proxy, python-pyaml,
python-simplejson, python-wrapt ...
[propagated-inputs]: to here.
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* gnu/packages/python.scm (python2-fake-factory)[native-inputs]: Move
python2-ipaddress ...
[propagated-inputs]: to here.
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* gnu/packages/python.scm (python-fake-factory)[native-inputs]: Move
python-dateutil-2, python-six ...
[propagated-inputs]: to here.
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* gnu/packages/python.scm (python-email-validator)[native-inputs]: Move
python-dnspython, python-idna ...
[propagated-inputs]: to here.
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* gnu/packages/python.scm (python-cleo)[native-inputs]: Move
python-psutil, python-pylev ...
[propagated-inputs]: to here.
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* gnu/packages/python.scm (python-arrow)[native-inputs]: Move
python-dateutil-2 ...
[propagated-inputs]: to here.
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* gnu/packages/python.scm (python-pykafka)[native-inputs]: Move
python-gevent, python-kazoo, python-tabulate ...
[propagated-inputs]: to here.
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* gnu/packages/python.scm (python-kazoo)[native-inputs]: Move
six ...
[propagated-inputs]: to here.
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* gnu/packages/python.scm (python-twisted)[native-inputs]: Move
python-zope-interface ...
[propagated-inputs]: to here.
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* gnu/local.mk: Modified file.
* gnu/packages/golang.scm: New file.
Co-authored-by: Efraim Flashner <efraim@flashner.co.il>
Co-authored-by: Andy Wingo <wingo@igalia.com>
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/bioinformatics.scm (khmer): New variable.
* gnu/packages/patches/khmer-use-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
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* gnu/packages/bioinformatics.scm (python-screed, python2-screed):
New variables.
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* gnu/packages/qt.scm (qttools): Update to 5.6.1-1.
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* gnu/packages/qt.scm (qtlocation): Update to 5.6.1-1.
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* gnu/packages/qt.scm (qtwebchannel): Update to 5.6.1-1.
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* gnu/packages/qt.scm (qtserialport): Update to 5.6.1-1.
[inputs]: Add eudev.
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* gnu/packages/qt.scm (qtwayland): Update to 5.6.1-1.
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* gnu/packages/qt.scm (qtmultimedia): Update to 5.6.1-1.
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* gnu/packages/qt.scm (qtsensors): Update to 5.6.1-1.
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* gnu/packages/qt.scm (qtwebsockets): Update to 5.6.1-1.
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* gnu/packages/qt.scm (qtconnectivity): Update to 5.6.1-1.
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* gnu/packages/qt.scm (qtdeclarative): Update to 5.6.1-1.
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* gnu/packages/qt.scm (qtxmlpatterns): Update to 5.6.1-1.
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* gnu/packages/qt.scm (qtx11extras): Update to 5.6.1-1.
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* gnu/packages/qt.scm (qtimageformats): Update to 5.6.1-1.
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* gnu/packages/qt.scm (qtsvg): Update to 5.6.1-1.
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