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* gnu: Add r-puniform.Lars-Dominik Braun2021-03-12
| | | | * gnu/packages/statistics.scm (r-puniform): New variable.
* gnu: Add r-clubsandwich.Lars-Dominik Braun2021-03-12
| | | | * gnu/packages/statistics.scm (r-clubsandwich): New variable.
* gnu: Add r-quantpsyc.Lars-Dominik Braun2021-03-12
| | | | * gnu/packages/statistics.scm (r-quantpsyc): New variable.
* gnu: Add r-ez.Lars-Dominik Braun2021-03-12
| | | | * gnu/packages/cran.scm (r-ez): New variable.
* gnu: Add r-prereg.Lars-Dominik Braun2021-03-12
| | | | * gnu/packages/cran.scm (r-prereg): New variable.
* gnu: Add python-upsetplot.Ricardo Wurmus2021-03-12
| | | | * gnu/packages/python-science.scm (python-upsetplot): New variable.
* gnu: Add python-statannot.Ricardo Wurmus2021-03-12
| | | | * gnu/packages/python-science.scm (python-statannot): New variable.
* gnu: lisp-repl-core-dumper: Update to 0.7.0.Pierre Neidhardt2021-03-12
| | | | * gnu/packages/lisp.scm (lisp-repl-core-dumper): Update to 0.7.0.
* gnu: snakemake: Update to 5.32.2.Ricardo Wurmus2021-03-12
| | | | | * gnu/packages/python-xyz.scm (snakemake): Update to 5.32.2. [arguments]: Adjust patch in call-wrapper-not-wrapped-snakemake.
* gnu: gnome-shell: Fix CVE-2020-17489.Mark H Weaver2021-03-12
| | | | | | * gnu/packages/patches/gnome-shell-CVE-2020-17489.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gnome.scm (gnome-shell)[source]: Add patch.
* gnu: gnome-shell: Update to 3.34.5.Mark H Weaver2021-03-12
| | | | * gnu/packages/gnome.scm (gnome-shell): Update to 3.34.5.
* gnu: gvfs: Update to 1.40.2 [security fixes].Mark H Weaver2021-03-12
| | | | | | | Includes fixes for CVE-2019-12447, CVE-2019-12448, CVE-2019-12449, and CVE-2019-12795. * gnu/packages/gnome.scm (gvfs): Update to 1.40.2.
* gnu: cairo: Fix CVE-2018-19876 and CVE-2020-35492.Mark H Weaver2021-03-12
| | | | | | | | | * gnu/packages/patches/cairo-CVE-2018-19876.patch, gnu/packages/patches/cairo-CVE-2020-35492.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/gtk.scm (cairo)[replacement]: New field. (cairo/fixed): New variable. (cairo-xcb): Use package/inherit.
* gnu: gdk-pixbuf: Fix CVE-2020-29385.Mark H Weaver2021-03-12
| | | | | | | | * gnu/packages/patches/gdk-pixbuf-CVE-2020-29385.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gtk.scm (gdk-pixbuf)[replacement]: New field. (gdk-pixbuf/fixed): New variable. (gdk-pixbuf+svg): Use package/inherit.
* gnu: java-openjfx-graphics: Install native libraries.Ricardo Wurmus2021-03-12
| | | | | | * gnu/packages/java.scm (java-openjfx-graphics)[arguments]: Add phase copy-missing-file and build-native. [native-inputs]: Add missing source file.
* gnu: glib: Fix CVE-2021-28153.Mark H Weaver2021-03-12
| | | | | | * gnu/packages/patches/glib-CVE-2021-28153.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/glib.scm (glib/fixed): Add the new patch.
* gnu: certbot, python-acme: Update to 1.13.0.Leo Famulari2021-03-11
| | | | | | | | | * gnu/packages/tls.scm (python-acme): Update to 1.13.0. [native-inputs]: Remove python-mock. [propagated-inputs]: Remove python-six. (certbot): Update to 1.13.0. [propagated-inputs]: Remove python-six. [arguments]: Remove 'build-documentation' phase.
* gnu: git-annex: Update to 8.20210310.Kyle Meyer2021-03-11
| | | | | | * gnu/packages/haskell-apps.scm (git-annex): Update to 8.20210310. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: linux-libre 4.4: Update to 4.4.261.Leo Famulari2021-03-11
| | | | | * gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.261. (linux-libre-4.4-pristine-source): Update hash.
* gnu: linux-libre 4.9: Update to 4.9.261.Leo Famulari2021-03-11
| | | | | * gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.261. (linux-libre-4.9-pristine-source): Update hash.
* gnu: linux-libre 4.14: Update to 4.14.225.Leo Famulari2021-03-11
| | | | | * gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.225. (linux-libre-4.14-pristine-source): Update hash.
* gnu: linux-libre 4.19: Update to 4.19.180.Leo Famulari2021-03-11
| | | | | * gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.180. (linux-libre-4.19-pristine-source): Update hash.
* gnu: linux-libre 5.4: Update to 5.4.105.Leo Famulari2021-03-11
| | | | | * gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.105. (linux-libre-5.4-pristine-source): Update hash.
* gnu: linux-libre 5.10: Update to 5.10.23.Leo Famulari2021-03-11
| | | | | * gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.23. (linux-libre-5.10-pristine-source): Update hash.
* gnu: linux-libre: Update to 5.11.6.Leo Famulari2021-03-11
| | | | | * gnu/packages/linux.scm (linux-libre-5.11-version): Update to 5.11.6. (linux-libre-5.11-pristine-source): Update hash.
* gnu: guile-curl: Update to 0.9.Xinglu Chen2021-03-11
| | | | | | | * gnu/packages/curl.scm (guile-curl): Update to 0.9. [#:phases]: Update path to module. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: wireshark: Update to 3.4.4.Tobias Geerinckx-Rice2021-03-11
| | | | * gnu/packages/networking.scm (wireshark): Update to 3.4.4.
* gnu: hangups: Update to 0.4.13.Tobias Geerinckx-Rice2021-03-11
| | | | * gnu/packages/messaging.scm (hangups): Update to 0.4.13.
* gnu: fmt: Update to 7.1.3.Greg Hogan2021-03-11
| | | | | | * gnu/packages/pretty-print.scm (fmt): Update to 7.1.3. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
* gnu: btrfs-progs: Update to 5.11.Tobias Geerinckx-Rice2021-03-11
| | | | * gnu/packages/linux.scm (btrfs-progs): Update to 5.11.
* gnu: libdatrie: Update to 0.2.13.Tobias Geerinckx-Rice2021-03-11
| | | | * gnu/packages/gtk.scm (libdatrie): Update to 0.2.13.
* gnu: libinih: Update to 53.Tobias Geerinckx-Rice2021-03-11
| | | | * gnu/packages/linux.scm (libinih): Update to 53.
* gnu: flatpak: Update to 1.10.2 [fixes CVE-2021-21381].Léo Le Bouter2021-03-11
| | | | * gnu/packages/package-management.scm (flatpak): Update to 1.10.2.
* gnu: mongodb: Update comment about package license.Efraim Flashner2021-03-11
| | | | | | * gnu/packages/databases.scm (mongodb): Adjust the comment about the licensing status of the package, there are still older branches receiving updates under the AGPL license.
* Revert "Revert "gnu: mongodb: Update to 3.4.24 [security fixes].""Efraim Flashner2021-03-11
| | | | | | | This reverts commit feff80cec3c97a3df2c20d300be12d67f79d4f22. I was mistaken, there are still branches of mongodb which are still licensed under the AGPL3
* gnu: Add computable-reals.Pierre Neidhardt2021-03-11
| | | | | * gnu/packages/lisp-xyz.scm (cl-computable-reals, ecl-computable-reals, sbcl-computable-reals): New variables.
* gnu: Add python-praw.Raghav Gururajan2021-03-11
| | | | | | * gnu/packages/python-web.scm (python-raw): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: Add python-prawcore.Raghav Gururajan2021-03-11
| | | | | | * gnu/packages/python-web.scm (python-prawcore): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: Add python-testfixtures.Raghav Gururajan2021-03-11
| | | | | | * gnu/packages/python-check.scm (python-testfixtures): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: Add python-betamax-serializers.Raghav Gururajan2021-03-11
| | | | | | * gnu/packages/python-web.scm (python-betamax-serializers): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: jasper: Update to 2.0.26.Tobias Geerinckx-Rice2021-03-11
| | | | * gnu/packages/image.scm (jasper): Update to 2.0.26.
* gnu: thermald: Update to 2.4.3.Tobias Geerinckx-Rice2021-03-11
| | | | * gnu/packages/admin.scm (thermald): Update to 2.4.3.
* gnu: doctest: Update to 2.4.5.Tobias Geerinckx-Rice2021-03-11
| | | | * gnu/packages/check.scm (doctest): Update to 2.4.5.
* gnu: jetring: Update to 0.30.Tobias Geerinckx-Rice2021-03-11
| | | | * gnu/packages/gnupg.scm (jetring): Update to 0.30.
* gnu: memkind: Remove duplicate COPYING file.Tobias Geerinckx-Rice2021-03-11
| | | | | * gnu/packages/disk.scm (memkind)[arguments]: Add the standard "--docdir=" location to #:configure-flags.
* gnu: memkind: Update to 1.11.0.Tobias Geerinckx-Rice2021-03-11
| | | | * gnu/packages/disk.scm (memkind): Update to 1.11.0.
* gnu: Update zfs to 2.0.4.raid5atemyhomework via Guix-patches via2021-03-11
| | | | | | | | | | | | | | | | Mostly FreeBSD fixes, some documentation changes and corrections, and a few small bugfixes. Tested with `guix build` only, no in-depth testing done. From 6037ac6f797f37abb579278a0d30cd16e6876ec6 Mon Sep 17 00:00:00 2001 From: raid5atemyhomework <raid5atemyhomework@protonmail.com> Date: Thu, 11 Mar 2021 12:43:58 +0000 Subject: [PATCH] gnu: Update zfs to 2.0.4. * gnu/packages/file-systems.scm (zfs): Update to 2.0.4, rename to OpenZFS. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
* gnu: fio: Update to 3.26.Tobias Geerinckx-Rice2021-03-11
| | | | * gnu/packages/benchmark.scm (fio): Update to 3.26.
* gnu: Add java-openjfx-controls.Ricardo Wurmus2021-03-11
| | | | * gnu/packages/java.scm (java-openjfx-controls): New variable.
* gnu: emacs-counsel: Update to 0.13.4.Nicolas Goaziou2021-03-11
| | | | | * gnu/packages/emacs-xyz.scm (emacs-counsel): Update to 0.13.4. [source]: Update URI.