| Commit message (Collapse) | Author | Age |
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* gnu/packages/package-management.scm (guix-devel): Update to 684bf7c.
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* gnu/packages/bioinformatics.scm (diamond): New variable.
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* guix/scripts/package.scm (specification->package+output): Move to...
* gnu/packages.scm (specification->package+output): ... here
* guix/scripts/archive.scm (guix): Adjust accordingly.
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* gnu/build/install.scm (register-closure): Add #:deduplicate? parameter and
honor it.
(populate-single-profile-directory): Likewise.
* gnu/system/install.scm (self-contained-tarball): Pass #:deduplicate? #f.
Invoke tar with --check-links.
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* gnu/packages/ocaml.scm (ocaml)[inputs]: Use (canonical-package gcc-4.8)
instead of GCC-FINAL.
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* gnu/packages/package-management.scm (guix-devel): Update to 2c04921.
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* gnu/packages/bioinformatics.scm (miso)[source]: Use "https" protocol for
downloading the source tarball.
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* gnu/packages/bioinformatics.scm (bedops): Update to 2.4.14.
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* gnu/packages/freedesktop.scm (wayland): New variable.
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* gnu/system.scm (<operating-system>): Rename record field.
(etc-directory): Rename argument.
(operating-system-etc-directory): Adjust accordingly.
* doc/guix.texi (operating-system Reference): Likewise.
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* gnu/packages/samba.scm (talloc)[source]: Change URI to use https.
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* gnu/packages/qt.scm (qt)[inputs]: Add cups, libmng, postgresql and unixodbc.
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* gnu/packages/image.scm (libmng): New variable.
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* gnu/packages/qt.scm (qt): Update to 5.4.2.
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* gnu/packages/qt.scm (qt-4): Update to 4.8.7.
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* gnu/packages/samba.scm (talloc): Update to 2.1.2.
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* gnu/packages/ebook.scm (calibre): Update to 2.30.0.
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* gnu/packages/patches/qemu-CVE-2015-4037.patch,
gnu/packages/patches/qemu-CVE-2015-4103.patch,
gnu/packages/patches/qemu-CVE-2015-4104.patch,
gnu/packages/patches/qemu-CVE-2015-4105.patch,
gnu/packages/patches/qemu-CVE-2015-4106-pt1.patch,
gnu/packages/patches/qemu-CVE-2015-4106-pt2.patch,
gnu/packages/patches/qemu-CVE-2015-4106-pt3.patch,
gnu/packages/patches/qemu-CVE-2015-4106-pt4.patch,
gnu/packages/patches/qemu-CVE-2015-4106-pt5.patch,
gnu/packages/patches/qemu-CVE-2015-4106-pt6.patch,
gnu/packages/patches/qemu-CVE-2015-4106-pt7.patch,
gnu/packages/patches/qemu-CVE-2015-4106-pt8.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/qemu.scm (qemu-headless)[source]: Add patches.
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* gnu/packages/version-control.scm (git, git-manpages): Update to 2.4.3.
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* gnu/packages/video.scm (ffmpeg): Update to 2.7.
[native-inputs]: Add texinfo.
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* gnu/packages/ruby.scm (ruby-multipart-post): New variable.
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* gnu/packages/ruby.scm (ruby-slop): New variable.
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* gnu/packages/ruby.scm (ruby-git): New variable.
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* gnu/packages/ruby.scm (ruby-minitest-bacon): New variable.
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* gnu/packages/ruby.scm (ruby-minitest-sprint): New variable.
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* gnu/packages/ruby.scm (ruby-minitest): New variable.
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* gnu/packages/ruby.scm (ruby-daemons): New variable.
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* gnu/packages/ruby.scm (ruby-net-http-persistent): New variable.
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* gnu/packages/ruby.scm (ruby-connection-pool): New variable.
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* gnu/packages/ruby.scm (ruby-arel): New variable.
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* gnu/packages/ruby.scm (ruby-bacon): New variable.
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* gnu/packages/dwm.scm: Rename this ...
* gnu/packages/suckless.scm: ... to this.
* gnu-system.am (GNU_SYSTEM_MODULES): Change dwm.scm to suckless.scm.
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* gnu/packages/dwm.scm (st): New variable.
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Suggested by Mark H Weaver and others
at <http://lists.gnu.org/archive/html/guix-devel/2015-06/msg00227.html>.
* gnu/services/desktop.scm (%desktop-services): Remove call to 'lsh-service'.
* doc/guix.texi (Desktop Services): Adjust accordingly.
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* gnu/packages/emacs.scm (haskell-mode): New variable.
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* gnu/packages/python.scm (python-scikit-learn): Update to 0.16.1.
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* gnu/packages/bioinformatics.scm (orfm): Update to 0.4.1.
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* gnu/packages/python.scm (python-scikit-learn)[inputs]: Replace "atlas" with
"openblas".
* gnu/packages/python.scm (python-scikit-learn)[arguments]: Remove build phase
'set-environment-variables, which is only needed when ATLAS is used.
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* gnu/packages/python.scm (python-scipy)[inputs]: Remove "atlas", add "lapack"
and "openblas".
* gnu/packages/python.scm (python-scipy)[arguments]: Replace phase
"set-environment-variables" with "configure-openblas".
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* gnu/packages/python.scm (python-numpy-bootstrap)[inputs]: Add lapack to
inputs, because OpenBLAS does not include lapack functions.
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* gnu/packages/audio.scm (lv2): Update to 1.12.0.
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* gnu/packages/screen.scm (screen): Update to 4.3.0.
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* gnu/packages/openssl.scm (openssl): Update to 1.0.2b.
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* gnu/packages/patches/perl-net-ssleay-disable-ede-test.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/openssl.scm (perl-net-ssleay): Add patch.
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* gnu/packages/patches/python-disable-ssl-test.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python): Add patch.
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* gnu/packages/package-management.scm (guix-0.8.2)[arguments]: Add
'wrap-program' phase.
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* gnu/packages/package-management.scm (guix-0.8.2)[arguments]: Use
'modify-phases' instead of 'alist-cons-before'.
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* gnu/packages/ci.scm: New file.
* gnu/packages/patches/hydra-automake-1.15.patch,
gnu/packages/patches/hydra-disable-darcs-test.patch: New files.
* gnu-system.am (GNU_SYSTEM_MODULES): Add file.
(dist_patch_DATA): Add patches.
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* gnu/packages/web.scm (perl-catalyst-authentication-store-dbix-class):
New variable.
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* gnu/packages/web.scm (perl-catalyst-plugin-authorization-roles): New
variable.
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