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* gnu: wpa-supplicant: Add fix for CVE-2015-1863.Mark H Weaver2015-04-23
| | | | | | * gnu/packages/patches/wpa-supplicant-CVE-2015-1863.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/admin.scm (wpa-supplicant): Add patch.
* gnu: r: Update to 3.2.0.Ricardo Wurmus2015-04-23
| | | | * gnu/packages/statistics.scm (r): Update to 3.2.0.
* gnu: r: Set library rpath.Ricardo Wurmus2015-04-23
| | | | | * gnu/packages/statistics.scm (r)[arguments]: Add the rpath for lib directory of output to LDFLAGS.
* gnu: postgresql: Update to 9.3.6.Mark H Weaver2015-04-23
| | | | * gnu/packages/databases.scm (postgresql): Update to 9.3.6. Use .bz2 tarball.
* gnu: notmuch: Update to 0.19; add man pages and bash completion.Mark H Weaver2015-04-23
| | | | | | | * gnu/packages/mail.scm (notmuch)[source]: Update to 0.19. [arguments]: In 'configure' phase, set CC environment variable. Arrange to use rst2man.py instead of rst2man. [native-inputs]: Add python-2, python2-docutils, and bash-completion.
* gnu: Add gcc-5.1.0 and gcc-toolchain-5.1.0.Mark H Weaver2015-04-23
| | | | | * gnu/packages/gcc.scm (gcc-5.1): New variable. * gnu/packages/commencement.scm (gcc-toolchain-5.1): New variable.
* gnu: xfce4-settings: Add more inputs.宋文武2015-04-23
| | | | | * gnu/packages/xfce.scm (xfce4-settings)[inputs]: Add libxklavier, upower and xf86-input-libinput.
* gnu: libinput: Update to 0.14.1.宋文武2015-04-23
| | | | * gnu/packages/freedesktop.scm (libinput): Update to 0.14.1.
* gnu: Add xf86-input-libinput.宋文武2015-04-23
| | | | * gnu/packages/xorg.scm (xf86-input-libinput): New variable.
* gnu: guix: Update development snapshot.Mark H Weaver2015-04-22
| | | | * gnu/packages/package-management.scm (guix-devel): Update to fc34dee.
* gnu: ccl: Add default 'match' cases for unsupported platforms.Mark H Weaver2015-04-22
| | | | | * gnu/packages/lisp.scm (ccl)[arguments]: Add default 'match' cases for unsupported platforms.
* gnu: nginx: Fix configure flags on unsupported platforms.Mark H Weaver2015-04-22
| | | | | * gnu/packages/web.scm (nginx)[arguments]: Add default case in 'match' form within 'configure' phase.
* gnu: mplayer: Fix configure flags on armhf.Mark H Weaver2015-04-22
| | | | | | * gnu/packages/video.scm (mplayer)[arguments]: Add default case in 'match' form in configure flags. Enable support for arm processor features that are assumed by our armhf port.
* gnu: julia: Fix make-flags on non-Intel platforms.Mark H Weaver2015-04-22
| | | | * gnu/packages/julia.scm (julia)[arguments]: Add default case in 'match' form.
* gnu: python-pycairo: Fix build with with python-3.4.3.宋文武2015-04-22
| | | | | | | | | | * gnu/packages/patches/pycairo-wscript.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/gtk.scm (python-pycairo)[source]: Use it. [build-system]: Use waf-build-system. [native-inputs]: Add python-waf. [arguments]<#:phases>: Use 'modify-phases'. Add 'patch-waf phase. * gnu/packages/gtk.scm (python2-pycairo): Adjust accordingly.
* gnu: Add python-waf.宋文武2015-04-22
| | | | * gnu/packages/python.scm (python-waf, python2-waf): New variables.
* gnu: guix: Update development snapshot.Mark H Weaver2015-04-21
| | | | * gnu/packages/package-management.scm (guix-devel): Update to dd3a42e.
* gnu: guix: Don't install in /etc/bash_completion.d within build environment.Mark H Weaver2015-04-21
| | | | | | | | Fixes <http://bugs.gnu.org/20394>. Patch by Ludovic Courtès <ludo@gnu.org>. * gnu/packages/package-management.scm (guix)[arguments]: Pass "--with-bash-completion-dir" option to configure.
* Revert "gnu: libidn: Update to 1.30."Mark H Weaver2015-04-21
| | | | This reverts commit 8462a03f2861a1b3ed33e99a6f5a886bb9093846.
* gnu: libidn: Update to 1.30.Andreas Enge2015-04-21
| | | | * gnu/packages/libidn.scm (libidn): Update to 1.30.
* gnu: ocrad: Update to 0.25.Andreas Enge2015-04-21
| | | | * gnu/packages/ocr.scm (ocrad): Update to 0.25.
* gnu: Add TuxGuitar.Ricardo Wurmus2015-04-21
| | | | * gnu/packages/music.scm (tuxguitar): New variable.
* gnu: Add SWT.Ricardo Wurmus2015-04-21
| | | | * gnu/packages/java.scm (swt): New variable.
* gnu: Add eXpress.Ricardo Wurmus2015-04-21
| | | | * gnu/packages/bioinformatics.scm (express): New variable.
* gnu: Add bamtools.Ricardo Wurmus2015-04-21
| | | | * gnu/packages/bioinformatics.scm (bamtools): New variable.
* gnu: Add subread.Ricardo Wurmus2015-04-21
| | | | * gnu/packages/bioinformatics.scm (subread): New variable.
* system: Make /gnu/store a read-only bind mount by default.Ludovic Courtès2015-04-20
| | | | | | * gnu/system/file-systems.scm (%immutable-store): New variable. (%base-file-systems): Add it. * doc/guix.texi (File Systems): Document it.
* file-systems: Use a second 'mount' call for read-only bind mounts.Ludovic Courtès2015-04-20
| | | | | | | * gnu/build/file-systems.scm (MS_REMOUNT): New constant. (mount-file-system): Add 'flags' local variable. When FLAGS has MS_BIND & MS_RDONLY, call 'mount' with MS_REMOUNT. * gnu/services/base.scm (file-system-service) <start>: Likewise.
* gnu: Remove all #:select from (gnu packages ...) modules.Ludovic Courtès2015-04-20
| | | | | | | | | | | | | This works around Guile bug <http://bugs.gnu.org/15540>. Reported by Andreas Enge <andreas@enge.fr>. * gnu/packages/engineering.scm: Don't #:select from (gnu packages ...). * gnu/packages/gcc.scm: Likewise. * gnu/packages/package-management.scm: Likewise. * gnu/packages/photo.scm: Likewise. * gnu/packages/pulseaudio.scm: Likewise. * gnu/packages/moe.scm: Likewise, and #:select from (guix licenses) instead.
* gnu: Add sra-tools.Ricardo Wurmus2015-04-20
| | | | * gnu/packages/bioinformatics.scm (sra-tools): New variable.
* gnu: Add NCBI VDB.Ricardo Wurmus2015-04-20
| | | | * gnu/packages/bioinformatics.scm (ncbi-vdb): New variable.
* gnu: Add NGS Java bindings.Ricardo Wurmus2015-04-20
| | | | * gnu/packages/bioinformatics.scm (ngs-java): New variable.
* gnu: Add NGS SDK.Ricardo Wurmus2015-04-20
| | | | * gnu/packages/bioinformatics.scm (ngs-sdk): New variable.
* gnu: Add Biopython.Ricardo Wurmus2015-04-20
| | | | | * gnu/packages/bioinformatics.scm (python-biopython, python2-biopython): New variables.
* gnu: Adjust latest perl modules to new 'modify-phases' syntax.Eric Bavier2015-04-19
| | | | | | | * gnu/packages/compression.scm (perl-compress-raw-zlib)[arguments]: Add missing quotes, as needed since commit f8503e2. * gnu/packages/perl.scm (perl-ipc-run)[arguments]: Likewise. * gnu/packages/xml.scm (perl-xml-sax)[arguments]: Likewise.
* gnu: Add WebKitGTK+.宋文武2015-04-20
| | | | | * gnu/packages/webkit.scm: New file. * gnu-system.am (GNU_SYSTEM_MODULES): Add it.
* gnu: Add JSON-Any.Eric Bavier2015-04-19
| | | | * gnu/packages/perl.scm (perl-json-any): New variable.
* gnu: nix: Propagate perl inputs.Eric Bavier2015-04-19
| | | | | | * gnu/packages/package-management.scm (nix)[inputs]: Move perl-www-curl, perl-dbi, perl-dbd-sqlite to... [propagated-inputs]: ...this new field
* gnu: Add Sys-Hostname-Long.Eric Bavier2015-04-19
| | | | * gnu/packages/perl.scm (perl-sys-hostname-long): New variable.
* gnu: Add Text-Table.Eric Bavier2015-04-19
| | | | * gnu/packages/perl.scm (perl-text-table): New variable.
* gnu: Add Text-Aligner.Eric Bavier2015-04-19
| | | | * gnu/packages/perl.scm (perl-text-aligner): New variable.
* gnu: Add Set-Scalar.Eric Bavier2015-04-19
| | | | * gnu/packages/perl.scm (perl-set-scalar): New variable.
* gnu: Add SQL-SplitStatement.Eric Bavier2015-04-19
| | | | * gnu/packages/databases.scm (perl-sql-splitstatement): New variable.
* gnu: Add SQL-Tokenizer.Eric Bavier2015-04-19
| | | | * gnu/packages/databases.scm (perl-sql-tokenizer): New variable.
* gnu: Add Perl Readonly.Eric Bavier2015-04-19
| | | | * gnu/packages/perl.scm (perl-readonly): New variable.
* gnu: Add Perl Net-Amazon-S3.Eric Bavier2015-04-19
| | | | | | * gnu/packages/patches/perl-net-amazon-s3-moose-warning.patch: New patch. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/web.scm (perl-net-amazon-s3): New variable.
* gnu: Add XML-LibXML.Eric Bavier2015-04-19
| | | | * gnu/packages/xml.scm (perl-xml-libxml): New variable.
* gnu: Add XML-SAX;Eric Bavier2015-04-19
| | | | * gnu/packages/xml.scm (perl-xml-sax): New variable.
* gnu: Add XML-SAX-Base.Eric Bavier2015-04-19
| | | | * gnu/packages/xml.scm (perl-xml-sax-base): New variable.
* gnu: Add XML-NamespaceSupport.Eric Bavier2015-04-19
| | | | * gnu/packages/xml.scm (perl-xml-namespacesupport): New variable.
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