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* gnu: jasper: Updat eto 1.900.16.•••* gnu/packages/image.scm (japer): Update to 1.900.16. Efraim Flashner2016-10-27
* gnu: windowmaker: Add support for more image formats.•••* gnu/packages/gnustep.scm (windowmaker)[inputs]: Add giflib, libpng, and libtiff. Kei Kebreau2016-10-27
* gnu: r: Use uname from Guix•••* gnu/packages/statistics.scm (r): Use uname from Guix. Roel Janssen2016-10-27
* gnu: python-urllib3: Update to 1.18.1.•••* gnu/packages/python.scm (python-urllib3): Update to 1.18.1. [home-page]: Use https URL. Marius Bakke2016-10-27
* tests: Test installation with a RAID root partition.•••* gnu/tests/install.scm (%raid-root-os, %raid-root-os-source) (%raid-root-installation-script, %test-raid-root-os): New variables. Ludovic Courtès2016-10-27
* file-systems: 'disk-partitions' detected partitions from mapped devices.•••Previously, partitions of mdadm- or cryptsetup-produced block devices would not be returned by 'disk-partitions'. * gnu/build/file-systems.scm (disk-partitions)[last-character]: New procedure. [partition?]: Add 'name' parameter and rewrite. Adjust caller. * gnu/build/file-systems.scm (ENOENT-safe): Silently ignore ENOMEDIUM. Ludovic Courtès2016-10-27
* tests: Add #:memory-size parameter for the command to run the installed OS.•••* gnu/tests/install.scm (qemu-command/writable-image): Add #:memory-size parameter and honor it. Ludovic Courtès2016-10-27
* mapped-devices: Use 'mdadm-static' in 'raid-device-mapping'.•••* gnu/system/mapped-devices.scm (open-raid-device, close-raid-device): Use MDADM-STATIC instead of MDADM. Use 'file-append'. Ludovic Courtès2016-10-27
* gnu: Add mdadm-static.•••* gnu/packages/linux.scm (mdadm-static): New variable. Ludovic Courtès2016-10-27
* gnu: libmikmod: Update to 3.3.10.•••* gnu/packages/sdl.scm (libmikmod): Update to 3.3.10. Efraim Flashner2016-10-27
* gnu: sdl2: Update to 2.0.5.•••* gnu/packages/sdl.scm (sdl2): Update to 2.0.5. Efraim Flashner2016-10-27
* gnu: Use 'https' for libsdl urls.•••* gnu/packages/sdl.scm (sdl, sdl2, sdl-image, sdl-mixer, sdl-net) (sdl-ttf, sdl2-image, sdl2-ttf)[source]: Use https. [home-page]: Use https. Efraim Flashner2016-10-27
* gnu: mcelog: Update to 144.•••* gnu/packages/linux.scm (mcelog): Update to 144. Tobias Geerinckx-Rice2016-10-27
* gnu: btrfs-progs: Update to 4.8.2.•••* gnu/packages/linux.scm (btrfs-progs): Update to 4.8.2. Tobias Geerinckx-Rice2016-10-27
* gnu: gnupg: Add support for pcsc-lite.•••* gnu/packages/gnupg.scm (gnupg)[inputs]: Add pcsc-lite. [arguments]: Rename phase 'patch-config-files' to 'patch-paths'. Patch `scd/scdaemon.c' with absolute path of libpcsclite.so. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Mike Gerwitz2016-10-27
* gnu: Add pcsc-lite.•••* gnu/packages/security-token.scm (pcsc-lite): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Mike Gerwitz2016-10-27
* gnu: Add dbacl.•••* gnu/packages/textutils.scm (dbacl): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> ng02016-10-27
* gnu: valgrind: Use 'modify-phases' syntax.•••* gnu/packages/valgrind.scm (valgrind)[arguments]: Use 'modify-phases' syntax. Efraim Flashner2016-10-27
* gnu: valgrind: Update to 3.12.0.•••* gnu/packages/valgrind.scm (valgrind): Update to 3.12.0. Efraim Flashner2016-10-27
* gnu: python-pathlib2: Add comment.•••As suggested by Efraim Flashner. * gnu/packages/python.scm (python-pathlib2): Add comment. Hartmut Goebel2016-10-27
* gnu: shotwell: Update to 0.25.0.•••* gnu/packages/gnome.scm (shotwell): Update to 0.25.0. [inputs]: Add gcr. Leo Famulari2016-10-26
* gnu: vdirsyncer: Update to 0.14.0.•••* gnu/packages/dav.scm (vdirsyncer): Update to 0.14.0. Leo Famulari2016-10-26
* tests: Test installation with store on a separate partition.•••This is a followup to 0f65f54ebd76324653fd5506a7dab42ee44d9255. * gnu/tests/install.scm (%separate-store-os, %separate-store-os-source) (%separate-store-installation-script, %test-separate-store-os): New variables. Ludovic Courtès2016-10-27
* gnu: Add lci.•••* gnu/packages/lolcode.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> ng02016-10-26
* gnu: Add autossh.•••* gnu/packages/ssh.scm (autossh): New variable. Christopher Allan Webber2016-10-26
* gnu: r: Update to 3.3.1.•••* gnu/packages/statistics.scm (r): Update to 3.3.1. Ricardo Wurmus2016-10-26
* gnu: r-matrixstats: Update to 0.51.0.•••* gnu/packages/statistics.scm (r-matrixstats): Update to 0.51.0. Ricardo Wurmus2016-10-26
* gnu: r-r-utils: Update to 2.4.0.•••* gnu/packages/statistics.scm (r-r-utils): Update to 2.4.0. Ricardo Wurmus2016-10-26
* gnu: r-irlba: Update to 2.1.2.•••* gnu/packages/statistics.scm (r-irlba): Update to 2.1.2. Ricardo Wurmus2016-10-26
* gnu: r-codetools: Update to 0.2-15.•••* gnu/packages/statistics.scm (r-codetools): Update to 0.2-15. Ricardo Wurmus2016-10-26
* gnu: r-snow: Update to 0.4-2.•••* gnu/packages/statistics.scm (r-snow): Update to 0.4-2. Ricardo Wurmus2016-10-26
* gnu: r-backports: Update to 1.0.4.•••* gnu/packages/statistics.scm (r-backports): Update to 1.0.4. Ricardo Wurmus2016-10-26
* gnu: r-foreign: Update to 0.8-67.•••* gnu/packages/statistics.scm (r-foreign): Update to 0.8-67. Ricardo Wurmus2016-10-26
* gnu: r-cluster: Update to 2.0.5.•••* gnu/packages/statistics.scm (r-cluster): Update to 2.0.5. Ricardo Wurmus2016-10-26
* gnu: r-acepack: Update to 1.4.0.•••* gnu/packages/statistics.scm (r-acepack): Update to 1.4.0. Ricardo Wurmus2016-10-26
* gnu: r-r6: Update to 2.2.0.•••* gnu/packages/statistics.scm (r-r6): Update to 2.2.0. Ricardo Wurmus2016-10-26
* gnu: r-evaluate: Update to 0.10.•••* gnu/packages/statistics.scm (r-evaluate): Update to 0.10. Ricardo Wurmus2016-10-26
* gnu: r-reshape2: Update to 1.4.2.•••* gnu/packages/statistics.scm (r-reshape2): Update to 1.4.2. Ricardo Wurmus2016-10-26
* gnu: r-stringi: Update to 1.1.2.•••* gnu/packages/statistics.scm (r-stringi): Update to 1.1.2. Ricardo Wurmus2016-10-26
* gnu: r-matrix: Update to 1.2-7.1.•••* gnu/packages/statistics.scm (r-matrix): Update to 1.2-7.1. Ricardo Wurmus2016-10-26
* gnu: r-colorspace: Update to 1.2-7.•••* gnu/packages/statistics.scm (r-colorspace): Update to 1.2-7. Ricardo Wurmus2016-10-26
* gnu: r-jsonlite: Update to 1.1.•••* gnu/packages/web.scm (r-jsonlite): Update to 1.1. Ricardo Wurmus2016-10-26
* gnu: r-curl: Update to 2.2.•••* gnu/packages/web.scm (r-curl): Update to 2.2. Ricardo Wurmus2016-10-26
* gnu: r-seqinr: Update to 3.3-3.•••* gnu/packages/bioinformatics.scm (r-seqinr): Update to 3.3-3. Ricardo Wurmus2016-10-26
* gnu: r-rcpparmadillo: Update to 0.7.500.0.0.•••* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 7.500.0. * gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.500.0.0. Ricardo Wurmus2016-10-26
* gnu: armadillo: Update to 7.500.0.•••* gnu/packages/maths.scm (armadillo): Update to 7.500.0. Ricardo Wurmus2016-10-26
* gnu: r-rmarkdown: Update to 1.1.•••* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.1. [propagated-inputs]: Add r-evaluate, r-tibble. Ricardo Wurmus2016-10-26
* gnu: bioperl-minimal: Update to 1.7.0.•••* gnu/packages/bioinformatics.scm (bioperl-minimal): Update to 1.7.0. Ricardo Wurmus2016-10-26
* gnu: mupdf: Modify CVE-2016-8674 patch to apply to 1.9a.•••The fix from upstream did not apply cleanly due to many context changes. This was adapted by cloning mupdf 1.9a from git and fixing conflicts after applying our patches and cherry-picking upstream commit 1e03c06. This is a follow-up to 47a04fca999b91309d196afc9ebf4d8ac6f2083f. * gnu/packages/patches/mupdf-CVE-2016-8674.patch: Adapt to 1.9a. Marius Bakke2016-10-26
* gnu: python-certifi: Update to 2016.8.31.•••* gnu/packages/python.scm (python-certifi): Update to 2016.8.31. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> ng02016-10-26
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