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* gnu: Move content of openssl module into tls module.Andreas Enge2015-07-05
| | | | | | | | | | | | | | * gnu/packages/openssl.scm (openssl, perl-net-ssleay): Move to... * gnu/packages/tls.scm: ...here. * gnu/packages/openssl.scm: Delete file. * gnu-system.am (GNU_SYSTEM_MODULES): Unregister deleted file. * gnu/packages/{admin.scm, bittorrent.scm, certs.scm, ci.scm, cyrus-sasl.scm, databases.scm, dns.scm, ebook.scm, enlightenment.scm, gnunet.scm, libreoffice.scm, links.scm, mail.scm, messaging.scm, networking.scm, ntp.scm, openldap.scm, package-management.scm, pdf.scm, python.scm, qt.scm, rdesktop.scm, rdf.scm, ruby.scm, ssh.scm, synergy.scm, tor.scm, version-control.scm, video.scm, vpn.scm, w3m.scm, web.scm, weechat.scm, xiph.scm}: Adapt module import.
* gnu: Rename module gnutls to tls.Andreas Enge2015-07-05
| | | | | | | | | | | | * gnu/packages/gnutls.scm: Rename to... * gnu/packages/tls.scm: ... this. Change module name accordingly. * gnu/packages/{admin.scm, cups.scm, curl.scm, dc.scm, dns.scm, emacs.scm, ftp.scm, gnome.scm, gnunet.scm, gnupg.scm, gsasl.scm, lynx.scm, mail.scm, messaging.scm, package-management.scm, shishi.scm, task-management.scm, version-control.scm, video.scm, vpn.scm, webkit.scm, weechat.scm, wget.scm, wine.scm, xml.scm}: Adapt module import to new name. * gnu-system.am (GNU_SYSTEM_MODULES): Rename gnutls module to tls.
* gnu: avidemux: Drop version 2.5.Andreas Enge2015-07-05
| | | | * gnu/packages/video.scm (avidemux-2.5): Delete variable.
* gnu: Add prodigal.Ben Woodcroft2015-07-05
| | | | * gnu/packages/bioinformatics.scm (prodigal): New variable.
* gnu: shogun: Build with install RPATH.Ricardo Wurmus2015-07-04
| | | | | * gnu/packages/bioinformatics.scm (shogun)[arguments]: Add configure flag to build with install RPATH.
* gnu: englightenment: Use https URLs.Ludovic Courtès2015-07-04
| | | | | | * gnu/packages/enlightenment.scm (efl, elementary, emotion-generic-players, terminology, enlightenment): Use https instead of http since the latter redirects to the former.
* gnu: enlightenment: Update to 0.19.5.Efraim Flashner2015-07-04
| | | | * gnu/packages/enlightenment.scm (enlightenment): Update to 0.19.5.
* gnu: emotion-generic-loaders: Update to 1.14.0.Efraim Flashner2015-07-04
| | | | | * gnu/packages/enlightenment.scm (emotion-generic-loaders): Update to 1.14.0.
* gnu: evas-generic-loaders: Update to 1.14.0.Efraim Flashner2015-07-04
| | | | | * gnu/packages/enlightenment.scm (evas-generic-loaders): Update to 1.14.0.
* gnu: elementary: Update to 1.14.2.Efraim Flashner2015-07-04
| | | | * gnu/packages/enlightenment.scm (elementary): Update to 1.14.2.
* gnu: efl: Update to 1.14.2.Efraim Flashner2015-07-04
| | | | * gnu/packages/enlightenment.scm (efl): Update to 1.14.2.
* gnu: Add ruby-rake-compiler.pjotrp2015-07-04
| | | | * gnu/packages/ruby.scm (ruby-rake-compiler): New variable.
* gnu: eigen: Update to 3.2.5.Ricardo Wurmus2015-07-04
| | | | * gnu/packages/algebra.scm (eigen): Update to 3.2.5.
* gnu: icecat: Fix CVE-2015-{2722,2724,2728,2733,2735,2736,2738,2739,2740,2743}.Mark H Weaver2015-07-04
| | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/icecat-CVE-2015-2722-pt1.patch, gnu/packages/patches/icecat-CVE-2015-2722-pt2.patch, gnu/packages/patches/icecat-CVE-2015-2724-pt1.patch, gnu/packages/patches/icecat-CVE-2015-2724-pt2.patch, gnu/packages/patches/icecat-CVE-2015-2724-pt3.patch, gnu/packages/patches/icecat-CVE-2015-2724-pt4.patch, gnu/packages/patches/icecat-CVE-2015-2728-pt1.patch, gnu/packages/patches/icecat-CVE-2015-2728-pt2.patch, gnu/packages/patches/icecat-CVE-2015-2733-pt1.patch, gnu/packages/patches/icecat-CVE-2015-2733-pt2.patch, gnu/packages/patches/icecat-CVE-2015-2735.patch, gnu/packages/patches/icecat-CVE-2015-2736.patch, gnu/packages/patches/icecat-CVE-2015-2738.patch, gnu/packages/patches/icecat-CVE-2015-2739.patch, gnu/packages/patches/icecat-CVE-2015-2740.patch, gnu/packages/patches/icecat-CVE-2015-2743.patch: New files. * gnu-system.am (dist_patch_DATA): Add them. * gnu/packages/gnuzilla.scm (icecat)[source]: Add patches.
* gnu: unrtf: Fix download location.Andreas Enge2015-07-03
| | | | * gnu/packages/unrtf.scm (unrtf): Fix download location.
* gnu: r: Replace "atlas" with "openblas".Ricardo Wurmus2015-07-03
| | | | * gnu/packages/statistics.scm (r)[inputs]: Replace "atlas" with "openblas".
* gnu: gnutls: Move man3 pages to "doc" output.Ludovic Courtès2015-07-03
| | | | * gnu/packages/gnutls.scm (gnutls)[arguments]: Add #:phases.
* gnu: qt-4: Remove reference from "out" to "doc".Ludovic Courtès2015-07-03
| | | | | * gnu/packages/qt.scm (qt-4)[arguments]: Remove '-docdir' configure flag. Add 'move-doc' phase.
* gnu: qt-4: Use a more standard directory layout.Ludovic Courtès2015-07-03
| | | | | * gnu/packages/qt.scm (qt-4)[arguments]: Pass -datadir, -importdir, -plugindir, and -translationdir.
* gnu: qt-4: Use 'modify-phases'.Ludovic Courtès2015-07-03
| | | | | * gnu/packages/qt.scm (qt-4)[arguments]: Use 'modify-phases' instead of 'alist-replace'.
* gnu: cups-filter: Install backends and filters under lib/cups.Ludovic Courtès2015-07-03
| | | | | | | | | | This ensures that they are stripped during the 'strip' phase, thereby removing references to GCC and linux-libre-headers that would otherwise be found in debugging symbols. * gnu/packages/cups.scm (cups-filters)[source]: Change pkgbackenddir and pkgfilterdir to $(PREFIX)/lib/cups/{filter,backend}. (cups)[arguments]: Adjust accordingly.
* gnu: mysql: Remove unnecessary binaries.Ludovic Courtès2015-07-03
| | | | | | | This saves ~42 MiB on x86_64. * gnu/packages/databases.scm (mysql)[arguments]: Add 'remove-extra-binaries' phase.
* gnu: mysql: Strip references and GCC and other build-time dependencies.Ludovic Courtès2015-07-03
| | | | | * gnu/packages/databases.scm (mysql)[arguments]: Add 'strip-extra-references' phase.
* gnu: mutt: Don't retain reference to GCC.Ludovic Courtès2015-07-03
| | | | | | * gnu/packages/patches/mutt-store-references.patch: New file. * gnu/packages/mail.scm (mutt)[source]: Use it. * gnu-system.am (dist_patch_DATA): Add it.
* gnu: ghostscript: Add "doc" output.Ludovic Courtès2015-07-03
| | | | | | * gnu/packages/ghostscript.scm (ghostscript)[source](snippet): New field. [outputs]: New field. [arguments]: Add 'remove-doc-reference' phase.
* gnu: gnupg: Enable TLS support.Mark H Weaver2015-07-02
| | | | | | * gnu/packages/gnupg.scm (gnupg)[native-inputs]: Add pkg-config. [inputs]: Add gnutls. (gnupg-2.0, gnupg-1)[native-inputs]: Override inherited value to be '().
* gnu: gnupg: Update to 2.1.6.Mark H Weaver2015-07-02
| | | | * gnu/packages/gnupg.scm (gnupg): Update to 2.1.6.
* gnu: Add WarpedLMM.Ricardo Wurmus2015-07-02
| | | | * gnu/packages/bioinformatics.scm (python2-warpedlmm): New variable.
* gnu: r: Set default pager.Ricardo Wurmus2015-07-02
| | | | | * gnu/packages/statistics.scm (r)[arguments]: Add phase "set-default-pager" to avoid "false" as a default pager.
* environment: Define 'GUIX_ENVIRONMENT'.Ludovic Courtès2015-07-01
| | | | | | | * guix/scripts/environment.scm (create-environment): Define 'GUIX_ENVIRONMENT'. * doc/guix.texi (Invoking guix environment): Document it. * gnu/system/shadow.scm (default-skeletons): Adjust 'PS1' depending on whether 'GUIX_ENVIRONMENT' is defined.
* gnu: powertabeditor: Replace "gcc" with "libiberty".Ricardo Wurmus2015-07-01
| | | | | * gnu/packages/music.scm (powertabeditor)[inputs]: Replace "gcc" with "libiberty".
* gnu: Add Hydrogen.Ricardo Wurmus2015-07-01
| | | | * gnu/packages/music.scm (hydrogen): New variable.
* gnu: linux-libre: Update to 4.1.1.Mark H Weaver2015-07-01
| | | | * gnu/packages/linux.scm (linux-libre): Update to 4.1.1.
* gnu: git: Add inputs for send-email.Eric Bavier2015-06-30
| | | | | | | | | * gnu/packages/version-control.scm (package-transitive-propagated-labels*) (package-propagated-input-refs): New procedures. (git)[inputs]: Add perl-authen-sasl, perl-net-smtp-ssl, and perl-io-socket-ssl. [outputs]: Add send-email output. [arguments]: Add #:modules argument with srfi-1. In 'split phase, wrap git-send-email.
* gnu: Add perl-authen-sasl.Eric Bavier2015-06-30
| | | | * gnu/packages/web.scm (perl-authen-sasl): New variable.
* gnu: Add perl-gssapi.Eric Bavier2015-06-30
| | | | * gnu/packages/web.scm (perl-gssapi): New variable.
* gnu: Add perl-net-smtp-ssl.Eric Bavier2015-06-30
| | | | * gnu/packages/web.scm (perl-net-smtp-ssl): New variable.
* gnu: curl: Disable test that fails on Hydra.Mark H Weaver2015-06-30
| | | | * gnu/packages/curl.scm (arguments): Disable test 1510.
* gnu: curl: Update to 7.43.0.Mark H Weaver2015-06-30
| | | | * gnu/packages/curl.scm (curl): Update to 7.43.0.
* gnu: Add deal.II.Eric Bavier2015-06-29
| | | | | | * gnu/packages/maths.scm (dealii, dealii-openmpi): New variables. * gnu/packages/patches/dealii-p4est-interface.patch: New patch. * gnu-system.am (dist_patch_DATA): Add it.
* gnu: Add SLEPc.Eric Bavier2015-06-29
| | | | | * gnu/packages/maths.scm (slepc, slepc-complex, slepc-openmpi) (slepc-complex-openmpi): New variables.
* gnu: Add arpack-ng-openmpi.Eric Bavier2015-06-29
| | | | * gnu/packages/maths.scm (arpack-ng-openmpi): New variable.
* gnu: petsc: Upgrade to 3.6.0.Eric Bavier2015-06-29
| | | | | | * gnu/packages/maths.scm (petsc): Upgrade to 3.6.0. * gnu/packages/patches/petsc-fix-threadcomm.patch: Delete patch. * gnu-system.am (dist_patch_DATA): Remove it.
* gnu: Add MUMPS.Eric Bavier2015-06-29
| | | | | | | * gnu/packages/maths.scm (mumps, mumps-metis, mumps-openmpi) (mumps-metis-openmpi): New variables. * gnu/packages/patches/mumps-build-parallelism.patch: New patch. * gnu-system.am (dist_patch_DATA): Add it.
* gnu: Add METIS.Eric Bavier2015-06-29
| | | | * gnu/packages/maths.scm (metis): New variable.
* gnu: Add p4est.Eric Bavier2015-06-29
| | | | * gnu/packages/maths.scm (p4est, p4est-openmpi): New variables.
* gnu: Add ScaLAPACK.Eric Bavier2015-06-29
| | | | * gnu/packages/maths.scm (scalapack): New variable.
* gnu: scotch, pt-scotch: Build esmumps libraries.Eric Bavier2015-06-29
| | | | | | | * gnu/packages/maths.scm (scotch)[arguments]: Add 'build-esmumps phase. Install esmumps libraries and headers in 'install phase. (pt-scotch)[arguments]: Build ptesmumps in 'build phase. Add make parallelism.
* gnu: scotch, pt-scotch: Use modify-phases.Eric Bavier2015-06-29
| | | | * gnu/packages/maths.scm (scotch, pt-scotch)[arguments]: Use modify-phases.
* gnu: Update scotch to 6.0.4.Eric Bavier2015-06-29
| | | | | | | | | * gnu/packages/maths.scm (scotch): Update to 6.0.4. [arguments]: Add -fPIC to CFLAGS. * gnu/packages/patches/scotch-test-threading.patch: Adjust patch for a new set of test fixes. * gnu/packages/patches/pt-scotch-build-parallelism.patch: New patch. * gnu-system.am (dist_patch_DATA): Add it.
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