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* gnu: Use 'modify-phases' syntax.Kei Kebreau2017-09-20
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/admin.scm (mingetty, clusterssh, wpa-supplicant-minimal, wpa-supplicant, wakelan, acpica, tree, direvent, dstat)[arguments]: Use 'modify-phases' syntax. * gnu/packages/algebra.scm (arb)[arguments]: Likewise. * gnu/packages/apr.scm (apr-util)[arguments]: Likewise. * gnu/packages/audio.scm (clalsadrv, fluidsynth, faad2, lv2-mda-piano, lv2-mda-epiano, timidity++, vamp, soundtouch, portaudio, rsound, zita-convolver, zita-alsa-pcmi)[arguments]: Likewise. * gnu/packages/backup.scm (rdup, btar)[arguments]: Likewise. * gnu/packages/bioinformatics.scm (bedops, bwa, crossmap, express, flexbar, grit, hisat, ngs-sdk, subread)[arguments]: Likewise. * gnu/packages/bittorrent.scm (transmission)[arguments]: Likewise. * gnu/packages/cdrom.scm (cd-discid)[arguments]: Likewise. * gnu/packages/compression.scm (sharutils)[arguments]: Likewise. * gnu/packages/conky.scm (conky)[arguments]: Likewise. * gnu/packages/databases.scm (bdb, bdb-5.3)[arguments]: Likewise. * gnu/packages/debug.scm (delta, c-reduce)[arguments]: Likewise. * gnu/packages/display-managers.scm (slim)[arguments]: Likewise. * gnu/packages/dns.scm (dnsmasq)[arguments]: Likewise. * gnu/packages/emacs.scm (geiser, emacs-wget, bbdb)[arguments]: Likewise. * gnu/packages/engineering.scm (pcb)[arguments]: Likewise. * gnu/packages/firmware.scm (ath9k-htc-firmware)[arguments]: Likewise. * gnu/packages/flashing-tools.scm (flashrom)[arguments]: Likewise. * gnu/packages/fltk.scm (fltk)[arguments]: Likewise. * gnu/packages/freedesktop.scm (python-pyxdg)[arguments]: Likewise. * gnu/packages/gd.scm (perl-gd)[arguments]: Likewise. * gnu/packages/gkrellm.scm (gkrellm)[arguments]: Likewise. * gnu/packages/glib.scm (glibmm)[arguments]: Likewise. * gnu/packages/gl.scm (glew)[arguments]: Likewise. * gnu/packages/gnome.scm (icon-naming-utils, orbit2, libbonobo, gnome-vfs, libgnome, libbonoboui, goffice-0.8, dconf)[arguments]: Likewise. * gnu/packages/gprolog.scm (gprolog)[arguments]: Likewise. * gnu/packages/gps.scm (gpscorrelate)[arguments]: Likewise. * gnu/packages/graphics.scm (agg)[arguments]: Likewise. * gnu/packages/gtk.scm (ganv, girara, gtksourceview-2, guile-present, python2-pycairo)[arguments]: Likewise. * gnu/packages/guile.scm (guile-1.8)[arguments]: Likewise. * gnu/packages/guile-wm.scm (guile-wm)[arguments]: Likewise. * gnu/packages/hugs.scm (hugs)[arguments]: Likewise. * gnu/packages/hurd.scm (gnumach-headers, hurd-headers, hurd-minimal) [arguments]: Likewise. * gnu/packages/image-viewers.scm (feh, sxiv)[arguments]: Likewise. * gnu/packages/libcanberra.scm (libcanberra)[arguments]: Likewise. * gnu/packages/linux.scm (bridge-utils, iw, fuse, unionfs-fuse/static, lm-sensors, i2c-tools, xsensors, perf, mdadm, libaio, module-init-tools) [arguments]: Likewise. * gnu/packages/lisp.scm (ccl)[arguments]: Likewise. * gnu/packages/lout.scm (lout)[arguments]: Likewise. * gnu/packages/lua.scm (luajit)[arguments]: Likewise. * gnu/packages/machine-learning.scm (shogun)[arguments]: Likewise. * gnu/packages/mail.scm (exim)[arguments]: Likewise. * gnu/packages/man.scm (man-pages, txt2man)[arguments]: Likewise. * gnu/packages/maths.scm (lapack, superlu-dist, openlibm, openspecfun) [arguments]: Likewise. * gnu/packages/messaging.scm (bitlbee)[arguments]: Likewise. * gnu/packages/mp3.scm (libmad, id3lib, mp3info)[arguments]: Likewise. * gnu/packages/music.scm (solfege)[arguments]: Likewise. * gnu/packages/noweb.scm (noweb)[arguments]: Likewise. * gnu/packages/patchutils.scm (patchutils, quilt, colordiff)[arguments]: Likewise. * gnu/packages/pdf.scm (xpdf, zathura-cb, zathura-ps, zathura-djvu, zathura-pdf-poppler, zathura, podofo, fbida)[arguments]: Likewise. * gnu/packages/perl.scm (perl-file-list, perl-test-harness)[arguments]: Likewise. * gnu/packages/photo.scm (gphoto2)[arguments]: Likewise. * gnu/packages/popt.scm (popt)[arguments]: Likewise. * gnu/packages/pretty-print.scm (source-highlight, astyle)[arguments]: Likewise. * gnu/packages/pumpio.scm (pumpa)[arguments]: Likewise. * gnu/packages/python.scm (python-passlib, python-pycrypto, python2-empy, python-sqlalchemy, python-docopt)[arguments]: Likewise. * gnu/packages/rdf.scm (lrdf)[arguments]: Likewise. * gnu/packages/regex.scm (tre)[arguments]: Likewise. * gnu/packages/rrdtool.scm (rrdtool)[arguments]: Likewise. * gnu/packages/ruby.scm (ruby-2.1, ruby-1.8)[arguments]: Likewise. * gnu/packages/sawfish.scm (sawfish)[arguments]: Likewise. * gnu/packages/scheme.scm (racket)[arguments]: Likewise. * gnu/packages/sdl.scm (guile-sdl)[arguments]: Likewise. * gnu/packages/serveez.scm (serveez)[arguments]: Likewise. * gnu/packages/skribilo.scm (skribilo)[arguments]: Likewise. * gnu/packages/smalltalk.scm (smalltalk)[arguments]: Likewise. * gnu/packages/suckless.scm (dmenu, slock)[arguments]: Likewise. * gnu/packages/tcl.scm (expect)[arguments]: Likewise. * gnu/packages/telephony.scm (commoncpp)[arguments]: Likewise. * gnu/packages/textutils.scm (recode, libgtextutils)[arguments]: Likewise. * gnu/packages/time.scm (time)[arguments]: Likewise. * gnu/packages/tor.scm (privoxy)[arguments]: Likewise. * gnu/packages/uucp.scm (uucp)[arguments]: Likewise. * gnu/packages/video.scm (libdvdnav-4)[arguments]: Likewise. * gnu/packages/web-browsers.scm (lynx)[arguments]: Likewise. * gnu/packages/web.scm (tinyproxy)[arguments]: Likewise. * gnu/packages/wicd.scm (wicd)[arguments]: Likewise. * gnu/packages/wm.scm (bspwm)[arguments]: Likewise. * gnu/packages/xdisorg.scm (sxhkd, xcape)[arguments]: Likewise. * gnu/packages/xfce.scm (xfconf)[arguments]: Likewise. * gnu/packages/xfig.scm (transfig)[arguments]: Likewise. * gnu/packages/xorg.scm (imake)[arguments]: Likewise.
* gnu: bluez: Remove leftover patch.Marius Bakke2017-09-20
| | | | | | | This is a follow-up to commit 164fccea7eead86c6ebe389bc0255c72b161d109. * gnu/packages/patches/bluez-CVE-2017-1000250.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: cups-filters: Update to 1.17.7.Marius Bakke2017-09-20
| | | | * gnu/packages/cups.scm (cups-filters): Update to 1.17.7.
* gnu: poppler: Update to 0.59.0.Marius Bakke2017-09-20
| | | | * gnu/packages/pdf.scm (poppler): Update to 0.59.0.
* gnu: mesa: Update to 17.2.1.Marius Bakke2017-09-20
| | | | | | * gnu/packages/gl.scm (mesa): Update to 17.2.1. [inputs]: Add WAYLAND-PROTOCOLS. * gnu/packages/patches/mesa-skip-disk-cache-test.patch: Adjust context.
* gnu: harfbuzz: Update to 1.5.1.Marius Bakke2017-09-20
| | | | * gnu/packages/gtk.scm (harfbuzz): Update to 1.5.1.
* gnu: gtk+: Update to 3.22.21.Marius Bakke2017-09-20
| | | | * gnu/packages/gtk.scm (gtk+): Update to 3.22.21.
* gnu: ruby: Remove graft for 2.4.2.Marius Bakke2017-09-20
| | | | | | * gnu/packages/ruby.scm (ruby): Update to 2.4.2. [replacement]: Remove field. (ruby-2.4.2): Remove variable.
* gnu: gd: Remove graft for 2.2.5.Marius Bakke2017-09-20
| | | | | | | | | | | * gnu/packages/gd.scm (gd): Update to 2.2.5. [source]: Remove obsolete patches. [replacement]: Remove field. (gd-2.2.5): Remove variable. * gnu/packages/patches/gd-fix-gd2-read-test.patch, gnu/packages/patches/gd-php-73968-Fix-109-XBM-reading.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove patches. * gnu/packages/php.scm (php)[inputs]: Replace GD-2.2.5 with GD.
* gnu: gdk-pixbuf: Remove graft for 2.36.10.Marius Bakke2017-09-20
| | | | | | | * gnu/packages/gtk.scm (gdk-pixbuf): Update to 2.36.10. [replacement]: Remove field. (gdk-pixbuf+svg)[replacement]: Likewise. (gdk-pixbuf-2.36.10, gdk-pixbuf+svg-2.36.10): Remove variables.
* gnu: bluez: Update to 5.47.Marius Bakke2017-09-20
| | | | | | * gnu/packages/linux.scm (bluez): Update to 5.47. [replacement]: Remove field. (bluez/fixed): Remove variable.
* Merge branch 'master' into stagingMarius Bakke2017-09-20
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| * gnu: btrfs-progs: Install bash completions.Marius Bakke2017-09-20
| | | | | | | | | | * gnu/packages/linux.scm (btrfs-progs)[arguments]: Add 'install-bash-completion' phase.
| * gnu: python-pyjwt: Update to 1.5.3.Marius Bakke2017-09-20
| | | | | | | | * gnu/packages/python.scm (python-pyjwt): Update to 1.5.3.
| * gnu: samba: Update to 4.6.8.Marius Bakke2017-09-20
| | | | | | | | * gnu/packages/samba.scm (samba): Update to 4.6.8.
| * gnu: nss, nss-certs: Update to 3.33.Marius Bakke2017-09-20
| | | | | | | | | | * gnu/packages/gnuzilla.scm (nss): Update to 3.33. * gnu/packages/certs.scm (nss-certs): Likewise.
| * gnu: nspr: Update to 4.17.Marius Bakke2017-09-20
| | | | | | | | * gnu/packages/gnuzilla.scm (nspr): Update to 4.17.
| * gnu: gnupg: Update to 2.2.1.Marius Bakke2017-09-20
| | | | | | | | * gnu/packages/gnupg.scm (gnupg): Update to 2.2.1.
| * gnu: xorg-server: Prefer intel driver only for older GPUs.Andy Wingo2017-09-20
| | | | | | | | | | | | | | * gnu/packages/xorg.scm (xorg-server): Add patch to only prefer the intel driver for older Intel GPUs. Signed-off-by: Andy Wingo <wingo@igalia.com>
| * gnu: xf86-video-intel: Update to latest Git.Andy Wingo2017-09-20
| | | | | | | | | | | | * gnu/packages/xorg.scm (xf86-video-intel): Update to latest Git. Signed-off-by: Andy Wingo <wingo@igalia.com>
| * gnu: Add cheese.Andy Wingo2017-09-20
| | | | | | | | | | | | * gnu/packages/gnome.scm (cheese): New public variable. Signed-off-by: Andy Wingo <wingo@igalia.com>
| * gnu: Add gnome-video-effects.Andy Wingo2017-09-20
| | | | | | | | | | | | * gnu/packages/gnome.scm (gnome-video-effects): New public variable. Signed-off-by: Andy Wingo <wingo@igalia.com>
| * gnu: emacs-skewer-mode: Include html and js files.Oleg Pykhalov2017-09-19
| | | | | | | | | | | | * gnu/packages/emacs.scm (emacs-skewer-mode): Include html and js files. Signed-off-by: Alex Kost <alezost@gmail.com>
| * gnu: efl: Update to 1.20.4.Efraim Flashner2017-09-19
| | | | | | | | * gnu/packages/enlightenment.scm (efl): Update to 1.20.4.
| * gnu: cuirass: Update development snapshot.Ludovic Courtès2017-09-19
| | | | | | | | * gnu/packages/ci.scm (cuirass): Update to commit 87ad259.
| * gnu: qutebrowser: Update to 0.11.0.Eric Bavier2017-09-19
| | | | | | | | * gnu/packages/web-browsers.scm (qutebrowser): Update to 0.11.0.
| * gnu: gstreamer: Update to 1.12.3.Marius Bakke2017-09-18
| | | | | | | | | | * gnu/packages/gstreamer.scm (gstreamer, gst-plugins-base, gst-plugins-good, gst-plugins-bad, gst-plugins-ugly, gst-libav, python-gst): Update to 1.12.3.
| * gnu: gdk-pixbuf: Replace with 2.36.10.Marius Bakke2017-09-18
| | | | | | | | | | | | | | Fixes CVE-2017-2862, CVE-2017-2870 and CVE-2017-6311. * gnu/packages/gtk.scm (gdk-pixbuf, gdk-pixbuf+svg)[replacement]: New field. (gdk-pixbuf-2.36.10, gdk-pixbuf+svg-2.36.10): New variables.
| * gnu: freexl: Update to 1.0.4 [fixes CVE-2017-2923 and CVE-2017-2924].Marius Bakke2017-09-18
| | | | | | | | * gnu/packages/xml.scm (freexl): Update to 1.0.4.
| * gnu: newsbeuter: Fix CVE-2017-14500.Efraim Flashner2017-09-18
| | | | | | | | | | | | * gnu/packages/syndication.scm (newsbeuter)[source]: Add patch. * gnu/packages/patches/newsbeuter-CVE-2017-14500.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
| * gnu: tor: Update to 0.3.0.11 [fixes CVE-2017-0380].Tobias Geerinckx-Rice2017-09-18
| | | | | | | | * gnu/packages/tor.scm (tor): Update to 0.3.0.11.
| * gnu: youtube-dl: Update to 2017.09.15.Tobias Geerinckx-Rice2017-09-18
| | | | | | | | * gnu/packages/video.scm (youtube-dl): Update to 2017.09.15.
| * gnu: httpd: Patch "options bleed" [fixes CVE-2017-9798].Ludovic Courtès2017-09-18
| | | | | | | | | | | | * gnu/packages/patches/httpd-CVE-2017-9798.patch: New file. * gnu/packages/web.scm (httpd)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
| * gnu: r-rcas: Add missing inputs.Ricardo Wurmus2017-09-18
| | | | | | | | * gnu/packages/bioinformatics.scm (r-rcas)[propagated-inputs]: Add r-pbapply.
| * gnu: r-energy: Update to 1.7-2.Ricardo Wurmus2017-09-18
| | | | | | | | * gnu/packages/cran.scm (r-energy): Update to 1.7-2.
| * gnu: r-glmnet: Update to 2.0-12.Ricardo Wurmus2017-09-18
| | | | | | | | * gnu/packages/statistics.scm (r-glmnet): Update to 2.0-12.
| * gnu: r-lambda-r: Update to 1.2.Ricardo Wurmus2017-09-18
| | | | | | | | * gnu/packages/statistics.scm (r-lambda-r): Update to 1.2.
| * gnu: r-gridextra: Update to 2.3.Ricardo Wurmus2017-09-18
| | | | | | | | * gnu/packages/statistics.scm (r-gridextra): Update to 2.3.
| * gnu: r-dplyr: Update to 0.7.3.Ricardo Wurmus2017-09-18
| | | | | | | | * gnu/packages/statistics.scm (r-dplyr): Update to 0.7.3.
| * gnu: r-crayon: Update to 1.3.4.Ricardo Wurmus2017-09-18
| | | | | | | | * gnu/packages/statistics.scm (r-crayon): Update to 1.3.4.
| * gnu: r-svglite: Update to 1.2.1.Ricardo Wurmus2017-09-18
| | | | | | | | * gnu/packages/statistics.scm (r-svglite): Update to 1.2.1.
| * gnu: r-mgcv: Update to 1.8-21.Ricardo Wurmus2017-09-18
| | | | | | | | * gnu/packages/statistics.scm (r-mgcv): Update to 1.8-21.
| * gnu: r-rcas: Update to 1.3.4.Ricardo Wurmus2017-09-18
| | | | | | | | * gnu/packages/bioinformatics.scm (r-rcas): Update to 1.3.4.
| * gnu: r-caret: Update to 6.0-77.Ricardo Wurmus2017-09-18
| | | | | | | | | | * gnu/packages/statistics.scm (r-caret): Update to 6.0-77. [propagated-inputs]: Remove r-car; add r-recipes and r-withr.
| * gnu: r-rstudioapi: Update to 0.7.Ricardo Wurmus2017-09-18
| | | | | | | | * gnu/packages/statistics.scm (r-rstudioapi): Update to 0.7.
| * gnu: r-openssl: Update to 0.9.7.Ricardo Wurmus2017-09-18
| | | | | | | | | | * gnu/packages/statistics.scm (r-openssl): Update to 0.9.7. [inputs]: Replace openssl with libressl.
| * gnu: Add r-recipes.Ricardo Wurmus2017-09-18
| | | | | | | | * gnu/packages/cran.scm (r-recipes): New variable.
| * gnu: Add r-ipred.Ricardo Wurmus2017-09-18
| | | | | | | | * gnu/packages/cran.scm (r-ipred): New variable.
| * gnu: Add r-rcpproll.Ricardo Wurmus2017-09-18
| | | | | | | | * gnu/packages/cran.scm (r-rcpproll): New variable.
| * gnu: Add r-gower.Ricardo Wurmus2017-09-18
| | | | | | | | * gnu/packages/cran.scm (r-gower): New variable.
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