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* gnu: r-v8: Update to 3.2.0.Ricardo Wurmus2020-06-22
| | | | * gnu/packages/cran.scm (r-v8): Update to 3.2.0.
* gnu: r-hdf5array: Update to 1.16.1.Ricardo Wurmus2020-06-22
| | | | * gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.16.1.
* gnu: r-rhdf5: Update to 2.32.1.Ricardo Wurmus2020-06-22
| | | | * gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.32.1.
* gnu: r-biomart: Update to 2.44.1.Ricardo Wurmus2020-06-22
| | | | * gnu/packages/bioinformatics.scm (r-biomart): Update to 2.44.1.
* gnu: r-genomeinfodb: Update to 1.24.2.Ricardo Wurmus2020-06-22
| | | | * gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.24.2.
* gnu: r-gdsfmt: Update to 1.24.1.Ricardo Wurmus2020-06-22
| | | | * gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.24.1.
* gnu: r-cicero: Update to 1.6.1.Ricardo Wurmus2020-06-22
| | | | | * gnu/packages/bioconductor.scm (r-cicero): Update to 1.6.1. [propagated-inputs]: Add r-stringi.
* gnu: r-cytoml: Update to 2.0.5.Ricardo Wurmus2020-06-22
| | | | | * gnu/packages/bioconductor.scm (r-cytoml): Update to 2.0.5. [propagated-inputs]: Add r-xml2.
* gnu: r-wiggleplotr: Update to 1.12.1.Ricardo Wurmus2020-06-22
| | | | * gnu/packages/bioconductor.scm (r-wiggleplotr): Update to 1.12.1.
* gnu: r-regioner: Update to 1.20.1.Ricardo Wurmus2020-06-22
| | | | * gnu/packages/bioconductor.scm (r-regioner): Update to 1.20.1.
* gnu: Add r-rlinsolve.Ricardo Wurmus2020-06-22
| | | | * gnu/packages/cran.scm (r-rlinsolve): New variable.
* gnu: cuirass: Update to 0.0.1-33-61cc56f6.Mathieu Othacehe2020-06-22
| | | | * gnu/packages/ci.scm (cuirass): Update to 0.0.1-33-61cc56f6.
* gnu: xl2tpd: Fix typo.Mathieu Othacehe2020-06-22
| | | | * gnu/packages/vpn.scm (xl2tpd)[arguments]: Turn "-DPPD" into "-DPPPD".
* gnu: express: Update to 1.5.3.Ricardo Wurmus2020-06-22
| | | | | | * gnu/packages/bioinformatics.scm (express): Update to 1.5.3. [source]: Fetch from Github. [arguments]: Add phase "remove-update-check".
* gnu: youtube-dl: Update to 2020.06.16.Tobias Geerinckx-Rice2020-06-22
| | | | * gnu/packages/video.scm (youtube-dl): Update to 2020.06.16.
* gnu: vmpk: Update home page.Tobias Geerinckx-Rice2020-06-22
| | | | gnu/packages/music.scm (vmpk)[home-page]: Update TLD and use HTTPS.
* gnu: bison-3.6: Don't change the name of the package.Jakub Kądziołka2020-06-22
| | | | | | This is a follow-up to commit 512d23c65d82bb874ca1fb3c12095b1cec8bbfca. * gnu/packages/bison (bison-3.6)[name]: Remove the overridden value.
* gnu: linux-libre@4.14: Update to 4.14.185.Mark H Weaver2020-06-21
| | | | | * gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.185. (linux-libre-4.14-pristine-source): Update hash.
* gnu: linux-libre@4.9: Update to 4.9.228.Mark H Weaver2020-06-21
| | | | | * gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.228. (linux-libre-4.9-pristine-source): Update hash.
* gnu: linux-libre@4.4: Update to 4.4.228.Mark H Weaver2020-06-21
| | | | | * gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.228. (linux-libre-4.4-pristine-source): Update hash.
* gnu: Add r-boruta.Peter Lo2020-06-21
| | | | | | * gnu/packages/statistics.scm (r-boruta): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: xmoto: Update to 0.6.1.Nicolas Goaziou2020-06-22
| | | | | | * gnu/packages/games.scm (xmoto): Update to 0.6.1. [arguments]: Remove phase installing man pages, now properly handled by the installation script.
* gnu: emacs-relint: Update to 1.18.Nicolas Goaziou2020-06-21
| | | | * gnu/packages/emacs-xyz.scm (emacs-relint): Update to 1.18.
* gnu: guile: Add 3.0.3.Ludovic Courtès2020-06-21
| | | | * gnu/packages/guile.scm (guile-3.0.3): New variable.
* gnu: Add seahorse-adventures.Nicolas Goaziou2020-06-21
| | | | * gnu/packages/games.scm (seahorse-adventures): New variable.
* gnu: Add font-mplus-testflight.Julien Lepiller2020-06-21
| | | | * gnu/packages/fonts.scm (font-mplus-testflight): New variable.
* gnu: k3b: Update to 20.04.2.Timotej Lazar2020-06-21
| | | | | | * gnu/packages/kde-multimedia.scm (k3b): Update to 20.04.2. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: k3b: Note the runtime dependency on udisks-service.Timotej Lazar2020-06-21
| | | | | | | * gnu/packages/kde-multimedia.scm (k3b)[description]: Note that udisks-service should be enabled. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: k3b: Add inputs for libraries loaded at runtime.Timotej Lazar2020-06-21
| | | | | | | | | | | Patch the source to load these from absolute paths. Actual loading is done by the Qt library, so we cannot use k3b’s runpath. * gnu/packages/kde-multimedia.scm (k3b)[inputs]: Add libcdio-paranoia and libdvdcss. [arguments]<#:phases>[set-absolute-library-paths]: New phase. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: k3b: Add inputs for external programs.Timotej Lazar2020-06-21
| | | | | | | | | * gnu/packages/kde-multimedia.scm (k3b)[inputs]: Add cdrdao, dvd+rw-tools, libburn and sox. [arguments]<#:phases>[wrap-path]: New phase to wrap the binary with paths to the above. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add cdrdao.Timotej Lazar2020-06-21
| | | | | | * gnu/packages/cdrom.scm (cdrdao): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: add convmv.Leo Prikler2020-06-21
| | | | | | | * gnu/packages/convmv.scm: New file. * gnu/local.mk: Add it to build. Signed-off-by: Julien Lepiller <julien@lepiller.eu>
* gnu: Add font-fontna-yasashisa-antique.Julien Lepiller2020-06-21
| | | | gnu/packages/fonts.scm (font-fontna-yasashisa-antique): New variable.
* gnu: Add poke.B. Wilson2020-06-21
| | | | | | | * gnu/packages/engineering.scm (poke): New variable. * gnu/packages/bison.scm (bison-3.6): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
* gnu: git-annex: Update to 8.20200617.Kyle Meyer2020-06-21
| | | | | | * gnu/packages/haskell-apps.scm (git-annex): Update to 8.20200617. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: emacs-hy-mode: Update to 1.0.4.Vinicius Monego2020-06-21
| | | | | | * gnu/packages/emacs-xyz.scm (emacs-hy-mode): Update to 1.0.4. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
* gnu: xmoto: Unbundle ODE and libccd.Nicolas Goaziou2020-06-21
| | | | | * gnu/packages/games.scm (xmoto): Unbundle ODE and libccd. [inputs]: Add ode.
* gnu: xmoto: Update to 0.6.0-0-f7ca787.Nicolas Goaziou2020-06-21
| | | | | | | | | | * gnu/packages/games.scm (xmoto): Update to 0.6.0-0-f7ca787. [source]: Remove patches. [arguments]: Remove make-flags keyword. * gnu/packages/patches/xmoto-remove-glext.patch: * gnu/packages/patches/xmoto-reproducible.patch: * gnu/packages/patches/xmoto-utf8.patch: Delete files. * gnu/local.mk: Register previous deletions.
* gnu: emacs-hyperbole: Use inputs instead of propagated inputs.Nicolas Goaziou2020-06-21
| | | | | | | * gnu/packages/emacs-xyz.scm (emacs-hyperbole)[arguments]: Replace domainname with dnsdomainname, not hostname. [propagated-inputs]: move to... [inputs]: ...this.
* gnu: emacs-magit: Update to 0746bf1b.Pierre Langlois2020-06-21
| | | | | | * gnu/packages/emacs-xyz.scm (emacs-magit): Update to 0746bf1b. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
* gnu: emacs-hyperbole: Update to 7.0.6.Nicolas Goaziou2020-06-20
| | | | | | | | | * gnu/packages/emacs-xyz.scm (emacs-hyperbole): Update to 7.0.6. [source]: Use GNU ELPA URL. Remove some patches. [arguments]: Add phase. * gnu/packages/patches/emacs-hyperbole-do-not-check-dir.patch: Delete file. * gnu/packages/patches/emacs-hyperbole-domainname.patch: Delete file. * gnu/local.mk: Register sole patch.
* gnu: gnutls: Pass #:tests? unconditionally.Ludovic Courtès2020-06-20
| | | | * gnu/packages/tls.scm (gnutls)[arguments]: Add #:tests? unconditionally.
* gnu: gnutls: Leave #:disallowed-references empty for GNU/Hurd.Ludovic Courtès2020-06-20
| | | | | | | | | Partly fixes <https://bugs.gnu.org/41775>. This is a followup to a9bcc6474667d6699500f03d69f9c8212a50d711. * gnu/packages/tls.scm (gnutls)[arguments]: Let #:disallowed-references empty when 'hurd-target?' returns true.
* gnu: Mutt: Update to 1.14.4.Leo Famulari2020-06-20
| | | | * gnu/packages/mail.scm (mutt): Update to 1.14.4.
* gnu: Add emacs-hyperbole.LaFreniere, Joseph2020-06-20
| | | | | | * gnu/packages/emacs-xyz.scm (emacs-hyperbole): Add at 7.0.3 Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
* gnu: Add hashcash.Jakub Kądziołka2020-06-20
| | | | * gnu/packages/networking.scm (hashcash): New variable.
* gnu: hydrogen: Update to 1.0.0-rc1.Nicolas Goaziou2020-06-20
| | | | * gnu/packages/music.scm (hydrogen): Update to 1.0.0-rc1.
* gnu: guile-config: Update to 0.4.2.Alex Sassmannshausen2020-06-20
| | | | * gnu/packages/guile-xyz.scm (guile-config): Update to 0.4.2.
* gnu: diffoscope: Update to 148.Vagrant Cascadian2020-06-19
| | | | | * gnu/packages/diffoscope (diffoscope): Update to 148. [arguments] Remove add-known-tools phase, fixed upstream.
* gnu: sudo: Update to 1.9.1.Tobias Geerinckx-Rice2020-06-19
| | | | * gnu/packages/admin.scm (sudo): Update to 1.9.1.
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