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* gnu: cutadapt: Update to 1.12.•••* gnu/packages/bioinformatics.scm (cutadapt): Update to 1.12. [inputs]: Add python-xopen. Tobias Geerinckx-Rice2016-12-19
* gnu: Add python-xopen.•••* gnu/packages/python.scm (python-xopen, python2-xopen): New variables. Tobias Geerinckx-Rice2016-12-19
* gnu: linux-libre: Update to 4.8.15.•••* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash) (linux-libre): Update to 4.8.15. Mark H Weaver2016-12-19
* Revert "gnu: linux-libre: Update to 4.9."•••This reverts commit 5a3849443ac8bdcffea0376b3c7efa30688c10bb. Module loading is broken on i686 with some configurations, including our default configuration. See <https://bugs.gnu.org/25231>. Mark H Weaver2016-12-19
* gnu: kdbusaddons: Embed kinit store dir, avoid dependency cycles.•••kdbusaddons needs to know the location of the kdeinit5 executable, provided by kinit. kinit depends on kdbusaddons, so we add bootstrap versions of all packages in the dependency chain from kinit to kdbusaddons to avoid cyclic dependencies. * gnu/packages/kde-frameworks.scm (kinit-bootstrap, kdbusaddons-bootstrap): New variables. (kdbusaddons)[inputs]: Add kinit-bootstrap. [source,arguments]: Add patch and substitution to embed kinit-bootstrap's store directory in the code. * gnu/packages/patches/kdbusaddons-kinit-file-name.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Thomas Danckaert2016-12-19
* gnu: openssh: Update to 7.4p1.•••* gnu/packages/ssh.scm (openssh): Update to 7.4p1. [source]: Remove 'openssh-memory-exhaustion.patch'. * gnu/packages/patches/openssh-memory-exhaustion.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Leo Famulari2016-12-19
* gnu: samba: Update to 4.5.3 [fixes CVE-2016-{2123,2125,2126}].•••* gnu/packages/samba.scm (samba): Update to 4.5.3. Leo Famulari2016-12-19
* gnu: pcsc-lite: Update to 1.8.19.•••* gnu/packages/security-token.scm (pcsc-lite): Update to 1.8.19. Marius Bakke2016-12-19
* gnu: hurd-headers: Update to 0.9.•••* gnu/packages/hurd.scm (hurd-headers): Update to version 0.9. Manolis Ragkousis2016-12-19
* gnu: mig: Update to 1.8.•••* gnu/packages/hurd.scm (mig): Update to version 1.8. Manolis Ragkousis2016-12-19
* gnu: gnumach-headers: Update to 1.8.•••* gnu/packages/hurd.scm (gnumach-headers): Update to version 1.8. Manolis Ragkousis2016-12-19
* gnu: gnuplot: Update to 5.0.5.•••* gnu/packages/maths.scm (gnuplot): Update to 5.0.5. Kei Kebreau2016-12-18
* gnu: wxmaxima: Update to 16.12.0.•••* gnu/packages/maths.scm (wxmaxima): Update to 16.12.0. Kei Kebreau2016-12-18
* gnu: tor: split description into two parts for easier reading.•••* gnu/packages/tor.scm (tor)[description]: Split it. Kei Kebreau2016-12-18
* gnu: maxima: Update to 5.39.0.•••* gnu/packages/maths.scm (maxima): Update to 5.39.0. Kei Kebreau2016-12-18
* gnu: mumble: Update to 1.2.18.•••* gnu/packages/telephony.scm (mumble): Update to 1.2.18. Marius Bakke2016-12-18
* gnu: python-docutils: Update to 0.13.1•••* gnu/packages/python.scm(python-docutils): Update to 0.13.1. [source]: Use pypi-uri. Hartmut Goebel2016-12-18
* build: check-final-inputs-self-contained has an exception for 'bash:include'.•••Currently 'bash:include' of the final Bash depends on bootstrap stuff. * build-aux/check-final-inputs-self-contained.scm (final-inputs): Add clause for 'bash:include'. * gnu/packages/commencement.scm (bash-final): Add FIXME comment. Ludovic Courtès2016-12-18
* gnu: yoshimi: Update to 1.5.0.•••* gnu/packages/music.scm (yoshimi): Update to 1.5.0. Ricardo Wurmus2016-12-18
* gnu: emacs-org: Update to 20161214.•••* gnu/packages/emacs.scm (emacs-org): Update to 20161214. Signed-off-by: 宋文武 <iyzsong@member.fsf.org> Nicolas Goaziou2016-12-18
* gnu: youtube-dl: Update to 2016.12.15.•••* gnu/packages/video.scm (youtube-dl): Update to 2016.12.15. Leo Famulari2016-12-17
* gnu: r: Update to 3.3.2.•••* gnu/packages/statistics.scm (r): Update to 3.3.2. Raoul Bonnal2016-12-18
* gnu: Add attribution line for Raoul Bonnal.•••This is a follow-up commit to c9e9154e993f055a438e2e43518bbd0740aaaf24. * gnu/packages/bioinformatics.scm: Add attribution. Ben Woodcroft2016-12-18
* gnu: sane-backends: Remove timestamps from the output.•••* gnu/packages/scanner.scm (sane-backends-minimal)[source](modules, snippet): New fields. Ludovic Courtès2016-12-17
* gnu: Add and use sane-backends.•••* gnu/packages/scanner.scm (sane-backends): New variable. * gnu/packages/gnome.scm (colord, simple-scan): Use it instead of 'sane-backends-minimal'. * gnu/packages/libreoffice.scm (libreoffice): Likewise. * gnu/packages/wine.scm (wine): Likewise. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Andy Patterson2016-12-17
* gnu: Add and use sane-backends-minimal.•••* gnu/packages/scanner.scm (sane-backends): Rename to... (sane-backends-minimal): this. Adjust name, source, synopsis and description accordingly. * gnu/packages/cups.scm (hplip): Use 'sane-backends-minimal' instead of 'sane-backends'. * gnu/packages/gnome.scm (colord, simple-scan): Likewise. * gnu/packages/libreoffice.scm (libreoffice): Likewise. * gnu/packages/wine.scm (wine): Likewise. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Andy Patterson2016-12-17
* gnu: sane-backends: Disable backend generation.•••* gnu/packages/scanner.scm (sane-backends)[arguments]: Add a phase to disable the compilation of backends. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Andy Patterson2016-12-17
* gnu: pinentry: Update to 1.0.0.•••* gnu/packages/gnupg.scm (pinentry-tty, pinentry-gtk2, pinentry-gnome3, pinentry-qt): Update to 1.0.0. Leo Famulari2016-12-17
* gnu: npth: Update to 1.3.•••* gnu/packages/gnupg.scm (npth): Update to 1.3. Leo Famulari2016-12-17
* gnu: bootstrap: Add FTP URL for bootstrap binaries.•••* gnu/packages/bootstrap.scm (%bootstrap-base-urls): Add ftp://alpha.gnu.org (http://alpha.gnu.org is currently unresponsive.) Ludovic Courtès2016-12-17
* gnu: star: Update to 2.5.2b.•••* gnu/packages/bioinformatics (star): Update to 2.5.2b. [source]: Delete precompiled binary. Co-authored-by: Ben Woodcroft <donttrustben@gmail.com> Raoul Bonnal2016-12-17
* gnu: Add fatfsck-static.•••* gnu/packages/disk.scm (dosfstools/static): New private variable. (fatfsck/static): New variable. Marius Bakke2016-12-17
* gnu: Add emacs-guix.•••* gnu/packages/emacs.scm (emacs-guix): New variable. Alex Kost2016-12-17
* gnu: Add emacs-bui.•••* gnu/packages/emacs.scm (emacs-bui): New variable. Alex Kost2016-12-17
* gnu: imagemagick: Update to 6.9.6-8.•••* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.6-8. Leo Famulari2016-12-17
* gnu: acme-client: Provide path to certificates.•••* gnu/packages/tls.scm (acme-client)[arguments]: Add 'patch-paths' phase. Leo Famulari2016-12-17
* gnu: libupnp: Fix CVE-2016-8863.•••* gnu/packages/patches/libupnp-CVE-2016-8863.patch: New file. * gnu/local.mk (dist_patch_DATA): Use it. * gnu/packages/libupnp.scm (libupnp)[source]: Use it. Leo Famulari2016-12-16
* gnu: Add Greek Aspell dictionary•••* gnu/packages/aspell.scm (aspell-dict-el): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Theodoros Foradis2016-12-16
* gnu: tor: Recommend torsocks.•••* gnu/packages/tor.scm (tor)[description]: Recommend torsocks. Signed-off-by: Kei Kebreau <kei@openmailbox.org> ng02016-12-16
* gnu: grub: Add dependency on efibootmgr.•••Suggested by Marius Bakke <mbakke@fastmail.com>. * gnu/packages/grub.scm (grub)[arguments]: In 'patch-stuff', set efibootmgr absolute file name in 'platform.c'. [inputs]: Add EFIBOOTMGR. Ludovic Courtès2016-12-16
* Revert "gnu: kmod: Update to 23."•••This should have been pushed to the ‘staging’ branch first. This reverts commit 1e1cd416293e9d119ca3c1fe136d52af10b41d85. Tobias Geerinckx-Rice2016-12-16
* gnu: libraw1394: Update to 2.1.2.•••* gnu/packages/linux.scm (libraw1394): Update to 2.1.2. Tobias Geerinckx-Rice2016-12-16
* gnu: kmod: Update to 23.•••* gnu/packages/linux.scm (kmod): Update to 23. Tobias Geerinckx-Rice2016-12-16
* gnu: ethtool: Update to 4.8.•••* gnu/packages/networking.scm (ethtool): Update to 4.8. Tobias Geerinckx-Rice2016-12-16
* gnu: mcelog: Update to 146.•••* gnu/packages/linux.scm (mcelog): Update to 146. Tobias Geerinckx-Rice2016-12-16
* gnu: linux-libre@4.4: Update to 4.4.39.•••* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.39. Mark H Weaver2016-12-15
* gnu: guile-irregex: Update to 0.9.6 [fixes CVE-2016-9954].•••* gnu/packages/guile.scm (guile-irregex): Update to 0.9.6. Leo Famulari2016-12-15
* gnu: cuirass: Update to revision 2.•••* gnu/packages/ci.scm (cuirass): Update to revision 2. [native-inputs]: Add texinfo. Mathieu Lirzin2016-12-15
* gnu: libpsl: Update to 0.16.0.•••* gnu/packages/web.scm (libpsl): Update to 0.16.0. Tobias Geerinckx-Rice2016-12-15
* gnu: openconnect: Update to 7.08.•••* gnu/packages/vpn.scm (openconnect): Update to 7.09. Tobias Geerinckx-Rice2016-12-15
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