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* gnu: r-scater: Update to 1.6.3.Ricardo Wurmus2018-02-19
| | | | * gnu/packages/bioinformatics.scm (r-scater): Update to 1.6.3.
* gnu: r-gviz: Update to 1.22.3.Ricardo Wurmus2018-02-19
| | | | * gnu/packages/bioinformatics.scm (r-gviz): Update to 1.22.3.
* gnu: r-gprofiler: Update to 0.6.4.Ricardo Wurmus2018-02-19
| | | | * gnu/packages/bioinformatics.scm (r-gprofiler): Update to 0.6.4.
* gnu: r-ensembldb: Update to 2.2.2.Ricardo Wurmus2018-02-19
| | | | * gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.2.2.
* gnu: r-seurat: Update to 2.2.1.Ricardo Wurmus2018-02-19
| | | | | * gnu/packages/bioinformatics.scm (r-seurat): Update to 2.2.1. [propagated-inputs]: Remove r-nmf; add r-metap.
* gnu: r-qtl: Update to 1.42-7.Ricardo Wurmus2018-02-19
| | | | * gnu/packages/bioinformatics.scm (r-qtl): Update to 1.42-7.
* gnu: r-genomicranges: Update to 1.30.2.Ricardo Wurmus2018-02-19
| | | | * gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.30.2.
* gnu: r-getopt: Update to 1.20.2.Ricardo Wurmus2018-02-19
| | | | * gnu/packages/bioinformatics.scm (r-getopt): Update to 1.20.2.
* gnu: r-pryr: Update to 0.1.4.Ricardo Wurmus2018-02-19
| | | | * gnu/packages/statistics.scm (r-pryr): Update to 0.1.4.
* gnu: r-bh: Update to 1.66.0-1.Ricardo Wurmus2018-02-19
| | | | * gnu/packages/statistics.scm (r-bh): Update to 1.66.0-1.
* gnu: r-nlme: Update to 3.1-131.1.Ricardo Wurmus2018-02-19
| | | | * gnu/packages/statistics.scm (r-nlme): Update to 3.1-131.1.
* gnu: r-bookdown: Update to 0.7.Ricardo Wurmus2018-02-19
| | | | | * gnu/packages/bioinformatics.scm (r-bookdown): Update to 0.7. [propagated-inputs]: Add r-tinytex.
* gnu: Add r-metap.Ricardo Wurmus2018-02-19
| | | | * gnu/packages/cran.scm (r-metap): New variable.
* gnu: Add r-tinytex.Ricardo Wurmus2018-02-19
| | | | * gnu/packages/cran.scm (r-tinytex): New variable.
* gnu: youtube-dl: Update to 2018.02.11.Rutger Helling2018-02-19
| | | | * gnu/packages/video.scm (youtube-dl): Update to 2018.02.11.
* gnu: retroarch: Update to 1.7.1.Rutger Helling2018-02-19
| | | | * gnu/packages/games.scm (retroarch): Update to 1.7.1.
* gnu: iverilog: Use Texinfo in description.Tobias Geerinckx-Rice2018-02-19
| | | | | * gnu/packages/fpga.scm (iverilog)[description]: Substitute @command for inverted commas.
* gnu: iverilog: Update to 10.2.Tobias Geerinckx-Rice2018-02-19
| | | | * gnu/packages/fpga.scm (iverilog): Update to 10.2.
* gnu: nyacc: Update to 0.83.3.Tobias Geerinckx-Rice2018-02-19
| | | | * gnu/packages/mes.scm (nyacc): Update to 0.83.3.
* gnu: nasm: Update to 2.13.03.Tobias Geerinckx-Rice2018-02-19
| | | | * gnu/packages/assembly.scm (nasm): Update to 2.13.03.
* gnu: ccache: Update to 3.4.1.Tobias Geerinckx-Rice2018-02-19
| | | | * gnu/packages/ccache.scm (ccache): Update to 3.4.1.
* gnu: lsof: Run tests.Tobias Geerinckx-Rice2018-02-19
| | | | | * gnu/packages/lsof.scm (lsof)[arguments]: Remove untrue #:TESTS?. Add ‘disable-failing-tests’ and ‘check’ phases to run them.
* gnu: lsof: Remove build timestamp.Tobias Geerinckx-Rice2018-02-19
| | | | * gnu/packages/lsof.scm (lsof)[arguments]: Add ‘patch-timestamps’ phase.
* gnu: lsof: Update phase style.Tobias Geerinckx-Rice2018-02-19
| | | | | * gnu/packages/lsof.scm (lsof)[arguments]: Substitute INVOKE for SYSTEM* and end phases with #t.
* gnu: lsof: Make perl a native input.Tobias Geerinckx-Rice2018-02-19
| | | | | * gnu/packages/lsof.scm (lsof)[inputs]: Move perl from here... [native-inputs]: ...to here.
* gnu: lsof: Factorise source URIs.Tobias Geerinckx-Rice2018-02-19
| | | | | * gnu/packages/lsof.scm (%ftp-base): Remove variable. (lsof)[source]: Construct mirror URI list programatically.
* gnu: lsof: Replace dead mirror.Tobias Geerinckx-Rice2018-02-19
| | | | | * gnu/packages/lsof.scm (lsof)[source]: Replace sunsite.ualberta.ca with mirrorservice.org, which offers both HTTP and FTP services.
* gnu: dvdstyler: Update to 3.0.4.Tobias Geerinckx-Rice2018-02-19
| | | | * gnu/packages/cdrom.scm (dvdstyler): Update to 3.0.4.
* gnu: perl-xml-sax: Update to 1.00.Tobias Geerinckx-Rice2018-02-19
| | | | * gnu/packages/xml.scm (perl-xml-sax): Update to 1.00.
* gnu: perl-importer: Update to 0.025.Tobias Geerinckx-Rice2018-02-19
| | | | * gnu/packages/perl.scm (perl-importer): Update to 0.025.
* gnu: perl-params-validationcompiler: Update to 0.27.Tobias Geerinckx-Rice2018-02-19
| | | | | * gnu/packages/perl.scm (perl-params-validationcompiler): Update to 0.27. [native-inputs]: Add perl-type-tiny for another test.
* gnu: xinetd: Don't hard-code tarball version.Tobias Geerinckx-Rice2018-02-19
| | | | * gnu/packages/web.scm (xinetd)[source]: Construct URI using VERSION.
* gnu: ncftp: Update to 3.2.6.Tobias Geerinckx-Rice2018-02-19
| | | | | * gnu/packages/ftp.scm (ncftp): Update to 3.2.6. [source]: Use .xz instead of (discontinued) .bz2 tarball.
* gnu: knot: Update to 2.6.5.Tobias Geerinckx-Rice2018-02-19
| | | | * gnu/packages/dns.scm (knot): Update to 2.6.5.
* gnu: awscli: Update to 1.14.41.Tobias Geerinckx-Rice2018-02-19
| | | | * gnu/packages/python-web.scm (awscli): Update to 1.14.41.
* gnu: libfilezilla: Update to 0.12.0.Tobias Geerinckx-Rice2018-02-19
| | | | * gnu/packages/ftp.scm (libfilezilla): Update to 0.12.0.
* gnu: erlang: Use HTTPS home page.Tobias Geerinckx-Rice2018-02-19
| | | | | * gnu/packages/erlang.scm (erlang)[home-page]: Use HTTPS with the new canonical domain.
* gnu: Add gzdoom.okapi2018-02-19
| | | | | | | | * gnu/packages/games.scm (gzdoom): New variable. * gnu/packages/patches/gzdoom-search-in-installed-share.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add fluid-3.okapi2018-02-19
| | | | | | * gnu/packages/audio.scm (fluid-3): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: guix: Update snapshot to bdf0c64.Ludovic Courtès2018-02-19
| | | | | | | | * gnu/packages/package-management.scm (guix): Update to bdf0c64. [arguments] <copy-bootstrap-guile>: Move after 'check' phase. Rewrite to use "guix download" and to intern only one or two tarballs. [inputs]: Remove "boot-guile/*". Add "boot-guile" and, optionally, "boot-guile/i686".
* gnu: qt.scm: Remove unneeded import.Marius Bakke2018-02-18
| | | | * gnu/packages/qt.scm (define-module): Don't import (gnu packages base).
* gnu: Add xorgproto.Marius Bakke2018-02-18
| | | | * gnu/packages/xorg.scm (xorgproto): New public variable.
* gnu: lvm2: Remove obsolete phase.Marius Bakke2018-02-18
| | | | * gnu/packages/linux.scm (lvm2)[arguments]: Remove MAKE-OBJECTS-WRITABLE-PHASE.
* gnu: argon2: Update to 20171227.Marius Bakke2018-02-18
| | | | | | | * gnu/packages/password-utils.scm (argon2): Update to 20171227. [arguments]: Add OPTTEST=1 to #:make-flags to prevent "-march=native". Remove custom install phase. Add 'patch-Makefile' phase. [license]: Add ASL2.0.
* gnu: Add qqc2-desktop-style.Hartmut Goebel2018-02-18
| | | | | * gnu/packages/kde-frameworks.scm (qqc2-desktop-style): New variable.
* gnu: knotifications: Add optional input "qtspeech".Hartmut Goebel2018-02-18
| | | | | * gnu/pacakges/kde-frameworks.scm (knotifications)[inputs]: Add qtspeech.
* gnu: ktextwidgets: Add optional input "qtspeech".Hartmut Goebel2018-02-18
| | | | | * gnu/pacakges/kde-frameworks.scm (ktextwidgets)[inputs]: Add qtspeech.
* gnu: qca: Use mirror://kde scheme for source-url.Hartmut Goebel2018-02-18
| | | | * gnu/packages/kde.scm (qca)[source]: Use mirror://kde scheme.
* gnu: snorenotify: Use mirror://kde scheme for source-url.Hartmut Goebel2018-02-18
| | | | * gnu/packages/kde.scm (snorenotify)[source]: Use mirror://kde scheme.
* gnu: libkomparediff2: Use mirror://kde scheme for source-url.Hartmut Goebel2018-02-18
| | | | | * gnu/packages/kde.scm (libkomparediff2)[source]: Use mirror://kde scheme.
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