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* gnu: emacs-org: Update to 20161224.Nicolas Goaziou2016-12-27
| | | | | | * gnu/packages/emacs.scm (emacs-org): Update to 20161224. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: Add httpstat.Stefan Reichoer2016-12-27
| | | | | | * gnu/packages/networking.scm (httpstat): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: Add python-netcdf4.Thomas Danckaert2016-12-27
| | | | | | * gnu/packages/python.scm (python-netcdf4, python2-netcdf4): New variables. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: r-rcas: Update to 1.1.1.Ricardo Wurmus2016-12-27
| | | | | * gnu/packages/bioinformatics.scm (r-rcas): Update to 1.1.1. [propagated-inputs]: Add plotrix.
* gnu: python-pycrypto: Add TODO "removal" comment.Leo Famulari2016-12-26
| | | | | * gnu/packages/python.scm (python-pycrypto, python2-pycrypto): Add comment.
* gnu: python-stem: Don't use python-pycrypto.Leo Famulari2016-12-26
| | | | | | | | | | | Python-pycrypto is an optional dependency of python-stem. Python-pycrypto is unmaintained [0] and contains an exploitable buffer overflow bug [1]. [0] https://github.com/dlitz/pycrypto/issues/173 [1] https://github.com/dlitz/pycrypto/issues/176 * gnu/packages/python.scm (python-stem, python2-stem)[propagated-inputs]: Remove python-pycrypto.
* gnu: awesome: Update to 4.0.ng02016-12-26
| | | | | | | | | * gnu/packages/wm.scm (awesome): Update to 4.0. [source]: Adjust URL. [inputs]: Add xcb-util-xrm and libxkbcommon. * gnu/packages/patches/awesome-reproducible-png.patch: Adjust patch. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: diamond: Update to 0.8.30.Ben Woodcroft2016-12-27
| | | | * gnu/packages/bioinformatics.scm (diamond): Update to 0.8.30.
* gnu: python-stem: Update to 1.5.3.Leo Famulari2016-12-26
| | | | | * gnu/packages/python.scm (python-stem, python2-stem): Update to 1.5.3. [source]: Update URL.
* gnu: ruby-minitest: Update to 5.10.1.Ben Woodcroft2016-12-26
| | | | * gnu/packages/ruby.scm (ruby-minitest): Update to 5.10.1.
* gnu: Add ripit.Roel Janssen2016-12-26
| | | | * gnu/packages/cdrom.scm (ripit): New variable.
* gnu: Add perl-cddb-get.Roel Janssen2016-12-26
| | | | * gnu/packages/perl.scm (perl-cddb-get): New variable.
* gnu: emacs-guix: Update to 0.2.1.Alex Kost2016-12-26
| | | | * gnu/packages/emacs.scm (emacs-guix): Update to 0.2.1.
* gnu: xf86-video-qxl: Update to 0.1.5.Efraim Flashner2016-12-26
| | | | * gnu/packages/xorg.scm (xf86-video-qxl): Update to 0.1.5.
* gnu: Add roffit.Ricardo Wurmus2016-12-25
| | | | * gnu/packages/groff.scm (roffit): New variable.
* gnu: libevdev: Update to 1.5.5.Efraim Flashner2016-12-25
| | | | | * gnu/packages/xorg.scm (libevdev): Update to 1.5.5. [houme-page]: Use https.
* gnu: libinput: Update to 1.5.3.Efraim Flashner2016-12-25
| | | | * gnu/packages/freedesktop.scm (libinput): Update to 1.5.3.
* gnu: exim: Update to 4.87.1 [fixes CVE-2016-9963].Marius Bakke2016-12-25
| | | | * gnu/packages/mail.scm (exim): Update to 4.87.1.
* gnu: leptonica: Update to 1.74.0.Taylan Ulrich Bayırlı/Kammer2016-12-25
| | | | | | * gnu/packages/image.scm (leptonica): Update to 1.74.0. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: font-gnu-unifont: Update to 9.0.06.Efraim Flashner2016-12-25
| | | | * gnu/packages/fonts.scm (font-gnu-unifont): Update to 9.0.06.
* gnu: libxml2: Fix CVE-2016-5131.Leo Famulari2016-12-24
| | | | | | * gnu/packages/patches/libxml2-CVE-2016-5131.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xml.scm (libxml2/fixed)[source]: Add it.
* gnu: libxml2: Fix CVE-2016-4658.Leo Famulari2016-12-24
| | | | | | | * gnu/packages/xml.scm (libxml2)[replacement]: New field. (libxml2/fixed): New variable. * gnu/packages/patches/libxml2-CVE-2016-4658.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* gnu: qt: Update to 5.7.1.Efraim Flashner2016-12-25
| | | | | | | | * gnu/packages/qt.scm (qtbase, qtsvg, qtimageformats, qtx11extras, qtxmlpatterns, qtdeclarative, qtconnectivity, qtwebsockets, qtsensors, qtmultimedia, qtwayland, qtserialport, qtwebchannel, qtlocation, qttools, qtscript, qtquickcontrols, qtquickcontrols2, qtgraphicaleffects, qtwebkit): Update to 5.7.1.
* gnu: alsa-utils: Update to 1.1.3.Efraim Flashner2016-12-25
| | | | * gnu/packages/linux.scm (alsa-utils): Update to 1.1.3.
* gnu: busybox: Update to 1.26.0.Efraim Flashner2016-12-25
| | | | | * gnu/packages/busybox.scm (busybox): Update to 1.26.0. [arguments]: Enable previously broken grep test.
* gnu: netcdf: Enable HDF4 support.Thomas Danckaert2016-12-24
| | | | | | | * gnu/packages/maths.scm (netcdf)[inputs]: Add hdf4-alt and libjpeg. [arguments]: Add "--enable-hdf4" configure flag. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: notmuch: Update to 0.23.4.Marius Bakke2016-12-24
| | | | | * gnu/packages/mail.scm (notmuch, python-notmuch, python2-notmuch): Update to 0.23.4.
* gnu: moreutils: Update to 5.9.Tobias Geerinckx-Rice2016-12-24
| | | | | | | | | | * gnu/packages/moreutils.scm (moreutils): Update to 5.9. [source]: Update the fall-back Debian snapshot URL. [inputs]: Move docbook-xml, docbook-xsl, libxml2, and libxslt from here... [native-inputs]: ...to this new variable. [arguments]: Delete the configure phase altogether. Set the DOCBOOKXSL path in #:make-flags instead. [home-page]: Use HTTPS.
* gnu: yadifa: Explicitly enable DNSSEC & caching.Tobias Geerinckx-Rice2016-12-23
| | | | | * gnu/packages/dns.scm (yadifa)[arguments]: Add configure flags to consistently enable the ‘nsec’, ‘nsec3’, ‘tsig’, and ‘caching’ features.
* gnu: yadifa: Update to 2.2.3.Tobias Geerinckx-Rice2016-12-23
| | | | | | * gnu/packages/dns.scm (yadifa): Update to 2.2.3. [version, source]: Remove monotonic revision number from the version string. Use it only to reconstruct the download URL.
* gnu: minetest: Update to 0.4.15.Kei Kebreau2016-12-23
| | | | * gnu/packages/games.scm (minetest-data, minetest): Update to 0.4.15.
* gnu: btrfs-progs: Update to 4.9.Tobias Geerinckx-Rice2016-12-23
| | | | * gnu/packages/linux.scm (btrfs-progs): Update to 4.9.
* gnu: gnurl: Split man pages to doc output.ng02016-12-23
| | | | | | * gnu/packages/gnunet.scm (gnurl)[arguments]: Add 'move-man3-pages' phase. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: gnurl: Make tests more verbose.ng02016-12-23
| | | | | | | * gnu/packages/gnunet.scm (gnurl)[arguments]: Replace the 'check' phase. Move the 'disable-test1026' and 'patch-runtests' phases into 'check' phase. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: gnurl: Update to 7.52.1 [fixes CVE-2016-{9586, 9952, 9953, 9594}].ng02016-12-23
| | | | | | | * gnu/packages/gnunet.scm (gnurl): Update to 7.52.1. [arguments]: Add 'autoconf' and 'disable-test1026' phases. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: Add asunder.Chris Marusich2016-12-23
| | | | | | * gnu/packages/cdrom.scm (asunder): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: dnscrypt-proxy: Update to 1.8.1.Marius Bakke2016-12-23
| | | | * gnu/packages/dns.scm (dnscrypt-proxy): Update to 1.8.1.
* gnu: curl: Update replacement to 7.52.1 [fixes CVE-2016-{9586,9594}].Marius Bakke2016-12-23
| | | | | | | * gnu/packages/curl.scm (curl)[replacement]: Update to 7.52.1. [home-page]: Use HTTPS. (curl-7.51.0): Replace with ... (curl-7.52.1): ... this.
* gnu: Add wwwoffle.Bake Timmons2016-12-23
| | | | | | * gnu/packages/web.scm (wwwoffle): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: Add python-hdf4.Thomas Danckaert2016-12-23
| | | | | | * gnu/packages/python.scm (python-hdf4, python2-hdf4): New variables. Co-authored-by: Marius Bakke <mbakke@fastmail.com>
* gnu: qsyncthingtray: Update to 0.5.7.Leo Famulari2016-12-23
| | | | * gnu/packages/sync.scm (qsyncthingtray): Update to 0.5.7.
* gnu: xonsh: Fix description.Kei Kebreau2016-12-22
| | | | * gnu/packages/shells.scm (xonsh)[description]: Two spaces after a period.
* gnu: qtimageformats: Add jasper support.Efraim Flashner2016-12-23
| | | | * gnu/packages/qt.scm (qtimageformats)[inputs]: Add jasper.
* gnu: xonsh: Update to 0.5.0.Stefan Reichör2016-12-22
| | | | | | * gnu/packages/shells.scm (xonsh): Update to 0.5.0. Signed-off-by: Kei Kebreau <kei@openmailbox.org>
* gnu: gnupg: Fix build on 32-bit architectures.Marius Bakke2016-12-22
| | | | | | * gnu/packages/patches/gnupg-test-segfault-on-32bit-arch.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/gnupg.scm (gnupg)[source]: Use it.
* gnu: python-scikit-learn: Update to 0.18.1.Ricardo Wurmus2016-12-22
| | | | | | * gnu/packages/python.scm (python-scikit-learn): Update to 0.18.1. [arguments]: Remove special "check" phase. [native-inputs]: Add python-cython.
* gnu: shotwell: Update to 0.25.2.Leo Famulari2016-12-22
| | | | * gnu/packages/gnome.scm (shotwell): Update to 0.25.2.
* gnu: gcc: Update to 6.3.0.Efraim Flashner2016-12-22
| | | | * gnu/packages/gcc.scm (gcc): Update to 6.3.0.
* gnu: abcde: Add flac support.Efraim Flashner2016-12-22
| | | | | * gnu/packages/cdrom.scm (abcde)[inputs]: Add flac. [arguments]: Wrap the bunary with flac's bin dir also.
* Merge branch 'version-0.12.0'Ricardo Wurmus2016-12-21
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