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* Merge remote-tracking branch 'origin/master' into core-updatesEfraim Flashner2017-12-31
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| * gnu, doc: Use HTTPS for cran.r-project.org home pages.Tobias Geerinckx-Rice2017-12-24
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/bioinformatics.scm (r-sparql, r-acsnminer, r-gkmsvm) (r-maldiquant, r-gprofiler)[home-page]: Use HTTPS. * gnu/packages/cran.scm (r-colorspace, r-auc, r-calibrate, r-shape) (r-compare, r-proxy, r-sp, r-rmtstat, r-lmtest, r-inline, r-bbmle) (r-lpsolve, r-energy, r-suppdists, r-ksamples, r-cvst, r-drr, r-prodlim) (r-ddalpha, r-rcpproll, r-ipred, r-psych, r-truncnorm, r-rsolnp, r-laeken) (r-vcd, r-ica, r-scatterplot3d)[home-page]: Likewise. * gnu/packages/machine-learning.scm (r-adaptivesparsity, r-kernlab) [home-page]: Likewise. * gnu/packages/maths.scm (r-quadprog, r-pracma)[home-page]: Likewise. * gnu/packages/statistics.scm (r-boot, r-cluster, r-codetools, r-foreign) (r-kernsmooth, r-nlme, r-mgcv, r-rpart, r-dichromat, r-estimability) (r-pheatmap, r-labeling, r-magrittr, r-munsell, r-rcolorbrewer, r-sendmailr) (r-gdtools, r-acepack, r-formula, r-locfit, r-chron, r-coda, r-backports) (r-brew, r-commonmark, r-rstudioapi, r-plotrix, r-gridbase, r-bitops) (r-catools, r-xnomial, r-lambda-r, r-whoreadsthis, r-futile-options) (r-futile-logger, r-segmented, r-snow, r-iterators, r-foreach, r-doparallel) (r-domc, r-irlba, r-registry, r-e1071, r-bigmemory-sri, r-r-methodss3) (r-tidyselect, r-base64, r-runit, r-sfsmisc, r-gtools, r-gdata, r-gplots) (r-ztable, r-vipor, r-sourcetools, r-statmod, r-compquadform, r-mixtools) (r-fastica, r-diptest, r-modeltools, r-flexmix, r-deoptimr, r-pcapp) (r-rrcov, r-fit-models, r-robust, r-trimcluster, r-fpc, r-fnn) (r-modelmetrics, r-nloptr, r-lme4, r-tclust, r-lubridate)[home-page]: Likewise. * gnu/packages/web.scm (r-htmltools, r-hwriter, r-rjson, r-rook)[home-page]: Likewise. * doc/guix.texi (Invoking guix import, Invoking guix refresh): Likewise.
* | Merge branch 'master' into core-updatesLeo Famulari2017-12-21
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| * gnu: r-testthat: Update to 2.0.0.Ricardo Wurmus2017-12-19
| | | | | | | | | | * gnu/packages/statistics.scm (r-testthat): Update to 2.0.0. [propagated-inputs]: Add r-cli, r-rlang, and r-withr.
| * gnu: r-ade4: Update to 1.7-10.Ricardo Wurmus2017-12-19
| | | | | | | | | | * gnu/packages/statistics.scm (r-ade4): Update to 1.7-10. [propagated-inputs]: Add r-mass.
| * gnu: r-registry: Update to 0.5.Ricardo Wurmus2017-12-19
| | | | | | | | * gnu/packages/statistics.scm (r-registry): Update to 0.5.
| * gnu: r-iterators: Update to 1.0.9.Ricardo Wurmus2017-12-19
| | | | | | | | * gnu/packages/statistics.scm (r-iterators): Update to 1.0.9.
| * gnu: r-segmented: Update to 0.5-3.0.Ricardo Wurmus2017-12-19
| | | | | | | | * gnu/packages/statistics.scm (r-segmented): Update to 0.5-3.0.
| * gnu: r-rprojroot: Update to 1.3-1.Ricardo Wurmus2017-12-19
| | | | | | | | * gnu/packages/statistics.scm (r-rprojroot): Update to 1.3-1.
| * gnu: r-rcpparmadillo: Update to 0.8.300.1.0.Ricardo Wurmus2017-12-19
| | | | | | | | * gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.8.300.1.0.
| * gnu: r-plotrix: Update to 3.7.Ricardo Wurmus2017-12-19
| | | | | | | | * gnu/packages/statistics.scm (r-plotrix): Update to 3.7.
| * gnu: r-git2r: Update to 0.20.0.Ricardo Wurmus2017-12-19
| | | | | | | | * gnu/packages/statistics.scm (r-git2r): Update to 0.20.0.
| * gnu: r-backports: Update to 1.1.2.Ricardo Wurmus2017-12-19
| | | | | | | | * gnu/packages/statistics.scm (r-backports): Update to 1.1.2.
| * gnu: r-yaml: Update to 2.1.16.Ricardo Wurmus2017-12-19
| | | | | | | | * gnu/packages/statistics.scm (r-yaml): Update to 2.1.16.
| * gnu: r-reshape2: Update to 1.4.3.Ricardo Wurmus2017-12-19
| | | | | | | | * gnu/packages/statistics.scm (r-reshape2): Update to 1.4.3.
| * gnu: r-digest: Update to 0.6.13.Ricardo Wurmus2017-12-19
| | | | | | | | * gnu/packages/statistics.scm (r-digest): Update to 0.6.13.
| * gnu: Update r-cowplot to 0.9.2.Roel Janssen2017-12-19
| | | | | | | | * gnu/packages/statistics.scm (r-cowplot): Update to 0.9.2.
* | Merge branch 'master' into core-updatesMarius Bakke2017-12-19
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| * gnu: r-foreach: Update to 1.4.4.Tobias Geerinckx-Rice2017-12-15
| | | | | | | | * gnu/packages/statistics.scm (r-foreach): Update to 1.4.4
| * gnu: r-caret: Update to 6.0-78.Tobias Geerinckx-Rice2017-12-14
| | | | | | | | * gnu/packages/statistics.scm (r-caret): Update to 6.0-78
| * gnu: r-domc: Update to 1.3.5.Tobias Geerinckx-Rice2017-12-14
| | | | | | | | * gnu/packages/statistics.scm (r-domc): Update to 1.3.5
| * gnu: Switch to using the version-major procedure.Christopher Baines2017-12-11
| | | | | | | | | | | | | | * gnu/packages/audio.scm (ardour)[arguments]: Switch to using version-major. (hmmer)[source]: Switch to using version-major. (pidgin)[native-search-paths]: Switch to using version-major. (r-minimal)[source]: Switch to using version-major.
* | Merge branch 'master' into core-updatesMarius Bakke2017-12-05
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| * gnu: r-bigmemory: Update to 4.5.31.Ricardo Wurmus2017-11-30
| | | | | | | | | | * gnu/packages/statistics.scm (r-bigmemory): Update to 4.5.31. [propagated-inputs]: Remove r-r-utils.
| * gnu: r-cowplot: Update to 0.9.1.Ricardo Wurmus2017-11-30
| | | | | | | | | | * gnu/packages/statistics.scm (r-cowplot): Update to 0.9.1. [propagated-inputs]: Add r-scales.
| * gnu: r-rcppprogress: Update to 0.4.Ricardo Wurmus2017-11-30
| | | | | | | | | | * gnu/packages/statistics.scm (r-rcppprogress): Update to 0.4. [propagated-inputs]: Add r-devtools.
| * gnu: r-rmarkdown: Update to 1.8.Ricardo Wurmus2017-11-30
| | | | | | | | | | * gnu/packages/statistics.scm (r-rmarkdown): Update to 1.8. [propagated-inputs]: Remove r-catools; add r-mime and r-stringr.
| * gnu: r-batchjobs: Update to 1.7.Ricardo Wurmus2017-11-30
| | | | | | | | | | | | * gnu/packages/statistics.scm (r-batchjobs): Update to 1.7. [propagated-inputs]: Add r-backports, r-data-table, and r-stringi; remove r-fail and r-stringr.
| * gnu: r-stringi: Update to 1.1.6.Ricardo Wurmus2017-11-30
| | | | | | | | * gnu/packages/statistics.scm (r-stringi): Update to 1.1.6.
| * gnu: r-devtools: Update to 1.13.4.Ricardo Wurmus2017-11-30
| | | | | | | | * gnu/packages/statistics.scm (r-devtools): Update to 1.13.4.
| * gnu: r-mclust: Update to 5.4.Ricardo Wurmus2017-11-30
| | | | | | | | * gnu/packages/statistics.scm (r-mclust): Update to 5.4.
| * gnu: r-rcppeigen: Update to 0.3.3.3.1.Ricardo Wurmus2017-11-30
| | | | | | | | * gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.3.3.1.
| * gnu: r-car: Update to 2.1-6.Ricardo Wurmus2017-11-30
| | | | | | | | * gnu/packages/statistics.scm (r-car): Update to 2.1-6.
| * gnu: r-sn: Update to 1.5-1.Ricardo Wurmus2017-11-30
| | | | | | | | * gnu/packages/statistics.scm (r-sn): Update to 1.5-1.
| * gnu: r-openssl: Update to 0.9.9.Ricardo Wurmus2017-11-30
| | | | | | | | * gnu/packages/statistics.scm (r-openssl): Update to 0.9.9.
| * gnu: r-hms: Update to 0.4.0.Ricardo Wurmus2017-11-30
| | | | | | | | | | * gnu/packages/statistics.scm (r-hms): Update to 0.4.0. [propagated-inputs]: Add r-rlang and r-pkgconfig.
| * gnu: Update r-matrix to 1.2-12.Roel Janssen2017-11-30
| | | | | | | | * gnu/packages/statistics.scm (r-matrix): Update to 1.2-12.
| * gnu: Update r-cluster to 2.0.6.Roel Janssen2017-11-30
| | | | | | | | * gnu/packages/statistics.scm (r-cluster): Update to 2.0.6.
| * gnu: Update r-minimal to 3.4.3.Roel Janssen2017-11-30
| | | | | | | | * gnu/packages/statistics.scm (r-minimal): Update to 3.4.3.
* | Merge branch 'master' into core-updatesMarius Bakke2017-11-19
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| * gnu: Move date/time packages from python.scm to time.scm.Ricardo Wurmus2017-11-18
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/python.scm (python-pytz, python2-pytz, python-dateutil, python2-dateutil, python-parsedatetime, python2-parsedatetime, python-tzlocal, python-isodate, python2-isodate, python-iso8601, python2-iso8601, python-monotonic, python2-monotonic, python-pyrfc3339, python2-pyrfc3339, python-arrow, python2-arrow, python-aniso8601, python2-aniso8601): Move from here... * gnu/packages/time.scm: ...to here. * gnu/packages/calendar.scm, gnu/packages/check.scm, gnu/packages/django.scm, gnu/packages/ebook.scm, gnu/packages/gnome.scm, gnu/packages/irc.scm, gnu/packages/jrnl.scm, gnu/packages/mail.scm, gnu/packages/openstack.scm, gnu/packages/package-management.scm, gnu/packages/python-crypto.scm, gnu/packages/python-web.scm, gnu/packages/rdf.scm, gnu/packages/statistics.scm, gnu/packages/tls.scm, gnu/packages/tryton.scm, gnu/packages/version-control.scm: Adjust accordingly.
| * gnu: Remove duplicates from (gnu packages statistics).Ricardo Wurmus2017-11-18
| | | | | | | | | | * gnu/packages/statistics.scm (r-cluster, r-codetools, r-kernsmooth): Remove duplicates.
| * gnu: Move testing packages from python.scm to check.scm.Ricardo Wurmus2017-11-17
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/python.scm (python-behave-web-api, python2-behave-web-api, python-mock, python2-mock, python-mock-2, python-nose, python2-nose, python-nose2, python2-nose2, python-unittest2, python2-unittest2, python-pytest, python2-pytest, python-pytest-3.0, python2-pytest-3.0, python-pytest-cov, python2-pytest-cov, python-pytest-runner, python2-pytest-runner, python-pytest-mock, python2-pytest-mock, python-pytest-xdist, python2-pytest-xdist, python-scripttest, python2-scripttest, python-testtools, python2-testtools, python-testscenarios, python2-testscenarios, python-testresources, python2-testresources, python-subunit, python2-subunit, python-fixtures, python2-fixtures, python-testrepository, python2-testrepository, python-coverage, python2-coverage, python-cov-core, python2-cov-core, python-testpath, python2-testpath, python-testlib, python2-testlib, python-pytest-cache, python2-pytest-cache, python-pytest-localserver, python-pytest-xprocess, python-pytest-subtesthack, python2-pytest-subtesthack, python-hypothesis, python2-hypothesis, python-lit, python2-lit, python-pytest-pep8, python2-pytest-pep8, python-pytest-flakes, python2-pytest-flakes, python2-coverage-test-runner, python-pylint, python2-pylint, python-paramunittest, python2-python-paramunittest, python-pytest-warnings, python2-pytest-warnings, python-pytest-capturelog, python2-pytest-capturelog, python-pytest-catchlog, python2-pytest-catchlog, python-nosexcover, python2-nosexcover, python-discover, python2-discover, behave, python-rednose, python2-rednose, python-nose-randomly, python2-nose-randomly, python-nose-timer, python2-nose-timer): Move from here... * gnu/packages/check.scm: ...to here. * gnu/packages/admin.scm, gnu/packages/android.scm, gnu/packages/backup.scm, gnu/packages/bioinformatics.scm, gnu/packages/calendar.scm, gnu/packages/dav.scm, gnu/packages/django.scm, gnu/packages/freedesktop.scm, gnu/packages/haskell.scm, gnu/packages/image.scm, gnu/packages/irc.scm, gnu/packages/jrnl.scm, gnu/packages/ldc.scm, gnu/packages/libffi.scm, gnu/packages/mail.scm, gnu/packages/mpd.scm, gnu/packages/openstack.scm, gnu/packages/package-management.scm, gnu/packages/password-utils.scm, gnu/packages/python-crypto.scm, gnu/packages/python-web.scm, gnu/packages/rdf.scm, gnu/packages/statistics.scm, gnu/packages/storage.scm, gnu/packages/time.scm, gnu/packages/tls.scm, gnu/packages/tor.scm, gnu/packages/tryton.scm: Adjust accordingly.
| * gnu: Add r-directlabels.Kyle Meyer2017-11-09
| | | | | | | | | | | | * gnu/packages/statistics.scm (r-directlabels): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| * gnu: r-prabclus: Update description.Ricardo Wurmus2017-11-07
| | | | | | | | * gnu/packages/statistics.scm (r-prabclus)[description]: Fix grammar errors.
| * gnu: r-fdrtool: Update description.Ricardo Wurmus2017-11-07
| | | | | | | | * gnu/packages/statistics.scm (r-fdrtool)[description]: Use "@dfn" syntax.
| * gnu: r-tidyselect: Update to 0.2.3.Ricardo Wurmus2017-11-07
| | | | | | | | * gnu/packages/statistics.scm (r-tidyselect): Update to 0.2.3.
| * gnu: r-lubridate: Update to 1.7.1.Ricardo Wurmus2017-11-07
| | | | | | | | | | * gnu/packages/statistics.scm (r-lubridate): Update to 1.7.1. [propagated-inputs]: Add r-rcpp.
| * gnu: r-preprocesscore: Update to 1.40.0.Ricardo Wurmus2017-11-07
| | | | | | | | * gnu/packages/statistics.scm (r-preprocesscore): Update to 1.40.0.
| * gnu: r-r-utils: Update to 2.6.0.Ricardo Wurmus2017-11-07
| | | | | | | | * gnu/packages/statistics.scm (r-r-utils): Update to 2.6.0.
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