| Commit message (Collapse) | Author | Age |
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* gnu/packages/cran.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/statistics.scm (r-colorspace): Move to cran.scm.
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* gnu/packages/statistics.scm (r-spams): Update to 2.6-2017-03-22.
[arguments]: Remove R-3.3 work-around and syntax fixes, add phase to
prevent tuning r-spams to the compiling hardware.
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* gnu/packages/zip.scm (zip, unzip, zziplib, perl-zip): Move to...
* gnu/packages/compression.scm: ...here.
* gnu/packages/zip.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Unregister deleted file.
* po/packages/POTFILES.in: Unregister deleted file.
* gnu/packages/{audio, avr, bioinformatics, busybox, cdrom, ci, compression,
docbook, documentation, fonts, fpga, game-development, games, gl, gnome,
gnuzilla, graphics, guile, haskell, image, java, kodi, ldc, libreoffice,
markup, maths, mc, monitoring, music, php, pretty-print, python, scheme,
smalltalk, statistics, synergy, tex, textutils, video, web-browsers, xml,
zip}.scm, guix/build-system/{ant, font}.scm, guix/{download, packages}.scm:
Adapt module import.
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* gnu/packages/statistics.scm (r-devtools): Update to 1.13.2.
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* gnu/packages/statistics.scm (r-fdrtool): New variable.
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* gnu/packages/statistics.scm (r-lubridate): New variable.
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* gnu/packages/statistics.scm (r-preprocesscore): Update to 1.38.0.
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* gnu/packages/statistics.scm (r-minimal): Update to 3.4.0.
[arguments]: Set timezone to UTC+1 in "set-timezone" phase to avoid regression
test failure.
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* gnu/packages/statistics.scm (r-caret): Update to 6.0-76.
[propagated-inputs]: Add r-lattice and r-nlme.
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* gnu/packages/statistics.scm (r-lme4): Update to 1.1-13.
[propagated-inputs]: Add r-lattice and r-matrix.
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* gnu/packages/statistics.scm (r-quantreg): Update to 5.33.
[propagated-inputs]: Add r-matrix.
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* gnu/packages/statistics.scm (r-compquadform): Update to 1.4.3.
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* gnu/packages/statistics.scm (r-zoo): Update to 1.8-0.
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* gnu/packages/statistics.scm (r-matrixstats): Update to 0.52.2.
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* gnu/packages/statistics.scm (r-r-rsp): Update to 0.41.0.
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* gnu/packages/statistics.scm (r-rtsne): Update to 0.13.
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* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.800.2.0.
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* gnu/packages/statistics.scm (r-memoise): Update to 1.1.0.
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* gnu/packages/statistics.scm (r-markdown): Update to 0.8.
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* gnu/packages/statistics.scm (r-assertthat): Update to 0.2.0.
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* gnu/packages/statistics.scm (r-rpart): Update to 4.1-11.
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* gnu/packages/statistics.scm (r-mass): Update to 7.3-47.
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* gnu/packages/statistics.scm (r-boot): Update to 1.3-19.
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* gnu/packages/statistics.scm (r-stringi): Update to 1.1.5.
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* gnu/packages/statistics.scm (r-sourcetools): Update to 0.1.6.
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* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.700.0.0.
[source]: Do not delete bundled armadillo sources, because upstream no longer
hosts previous versions.
[propagated-inputs]: Remove "armadillo-for-rcpparmadillo".
[arguments]: Remove because we no longer need to link with the armadillo
library.
* gnu/packages/bioinformatics.scm (r-deseq2)[arguments]: Remove because we no
longer need to link with armadillo library.
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* gnu/packages/statistics.scm (r-ranger): Update to 0.7.0.
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* gnu/packages/statistics.scm (r-pbkrtest): Update to 0.4-7.
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* gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.2.9.1.
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* gnu/packages/statistics.scm (r-mclust): Update to 5.2.3.
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* gnu/packages/statistics.scm (r-ggthemes): Update to 3.4.0.
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* gnu/packages/statistics.scm (r-statmod): Update to 1.4.29.
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* gnu/packages/statistics.scm (r-vipor): Update to 0.4.5.
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* gnu/packages/statistics.scm (r-mixtools): Update to 1.1.0.
[propagated-inputs]: Remove "r-boot", add "r-survival".
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* gnu/packages/statistics.scm (r-viridis): Update to 0.4.0.
[propagated-inputs]: Add "r-viridislite".
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* gnu/packages/statistics.scm (r-viridislite): Update to 0.2.0.
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* gnu/packages/statistics.scm (r-matrixstats): Update to 0.52.1.
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* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.0-6.
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* gnu/packages/statistics.scm (r-e1071): Update to 1.6-8.
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* gnu/packages/statistics.scm (r-sparsem): Update to 1.76.
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* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.6.
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* gnu/packages/statistics.scm (r-rsqlite): Update to 1.1-2.
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* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.4.
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* gnu/packages/statistics.scm (r-bbmisc): Update to 1.11.
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* gnu/packages/statistics.scm (r-backports): Update to 1.0.5.
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* gnu/packages/statistics.scm (r-multitaper): Update to 1.0-13.
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* gnu/packages/statistics.scm (r-xml2): Update to 1.1.1.
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* gnu/packages/statistics.scm (r-ade4): Update to 1.7-6.
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* gnu/packages/statistics.scm (r-data-table): Update to 1.10.4.
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* gnu/packages/statistics.scm (r-chron): Update to 2.3-50.
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