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* gnu: ruby-rubocop: Update to 1.10.0.Efraim Flashner2021-02-17
| | | | | | | | | | | | | | | * gnu/packages/ruby.scm (ruby-rubocop): Update to 1.10.0. [source]: Remove patch. [arguments]: Remove custom 'remove-problematic-tests, 'disable-bundler, 'replace-git-ls-files phases. Add custom 'check phase. [native-inputs]: Add ruby-memory-profiler, ruby-rake, ruby-rubocop-minimal, ruby-rubocop-performance-minimal, ruby-rubocop-rspec-minimal, ruby-simplecov, ruby-stackprof. Replace ruby-webmock-2 with ruby-webmock. (ruby-rubocop-minimal, ruby-rubocop-performance-minimal, ruby-rubocop-rspec-minimal): New variables. * gnu/packages/patches/ruby-rubocop-break-dependency-cycle.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: diffoscope: Update to use python-magic.Vagrant Cascadian2021-02-12
| | | | | | | | | Fixes: https://salsa.debian.org/reproducible-builds/diffoscope/-/issues/238 * gnu/packages/patches/diffoscope-revert-to-magic-open.patch: Remove file. * gnu/local.mk [dist_patch_DATA]: Update. * gnu/packages/diffoscope.scm (diffoscope)[source]: Remove patch. [inputs]: Remove python-file.
* gnu: diffoscope: Update to 166.Vagrant Cascadian2021-02-11
| | | | | | | * gnu/packages/diffoscope.scm (diffoscope): Update to 166. [source]: Add patch to use magic.open compatibility interface. * gnu/packages/patches/diffoscope-revert-to-magic-open.patch: New file. * gnu/local.mk [dist_patch_DATA]: New patch.
* Revert "gnu: inetutils: Update to 2.0."Tobias Geerinckx-Rice2021-02-10
| | | | | | | This reverts commit 55050e54a987cd99b8477da1a4993e83adcca129, which rebuilds xdg-utils and hence a good part of the world (1838 packages). Reported by mroh in #guix.
* gnu: inetutils: Update to 2.0.Ludovic Courtès2021-02-09
| | | | | | | * gnu/packages/admin.scm (inetutils): Update to 2.0. [source](patches): Remove. * gnu/packages/patches/inetutils-hurd.patch: Remove. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu: vorbis-tools: Update to 1.4.2.Vincent Legoll2021-02-09
| | | | | | | | | | | * gnu/packages/xiph.scm (vorbis-tools): Update to 1.4.2. (source): Remove obsolete patches. * gnu/packages/patches/vorbis-tools-CVE-2014-9638+CVE-2014-9639.patch, gnu/packages/patches/vorbis-tools-CVE-2014-9640.patch, gnu/packages/patches/vorbis-tools-CVE-2015-6749.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: qpdfview: Fix qt-5.15 compatibility.Timotej Lazar2021-02-09
| | | | | | | | | * gnu/packages/pdf.scm (qpdfview)[source]: Add patch to include a missing header. * gnu/packages/patches/qpdfview-qt515-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: emacs-undohist-el: Update to 0.2.1.Nicolas Goaziou2021-02-08
| | | | | | | * gnu/packages/emacs-xyz.scm (emacs-undohist-el): Update to 0.2.1. [origin]: Remove unnecessary patch. * gnu/packages/patches/emacs-undohist-ignored.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Apply deletion.
* gnu: hdf5: Update to 1.8.22.Eric Bavier2021-02-08
| | | | | | | | | | Fixes CVE-2018-14033, CVE-2018-11206, CVE-2018-13870, CVE-2018-13869, and CVE-2018-17435 * gnu/packages/maths.scm (hdf5-1.8): Update to 1.8.22. * gnu/packages/patches/hdf5-1.8-mpi-deprecations.patch: Delete upstreamed patch. * gnu/local/mk (dist_patch_DATA): Remove it.
* gnu: clementine: Update to 1.4.0rc1-450.Pierre Langlois2021-02-08
| | | | | | | | | | | | | | | | * gnu/packages/music.scm (clementine): Update to 1.4.0rc1-450. [source]: Adapt snippet to list bundled directories to keep rather than ones to delete. Unbundled gmock. Remove patches no longer needed. [arguments]: Set -DUSE_SYSTEM_TAGLIB=TRUE. [native-inputs]: Add googletest. [inputs]: Remove openssl. [license]: Remove gmock license. * gnu/packages/patches/clementine-fix-sqlite.patch: Remove. * gnu/packages/patches/clementine-remove-crypto++-dependency.patch: Remvoe * gnu/packages/patches/clementine-use-openssl.patch: Remove. * gnu/local.mk (dist_patch_DATA): Remove them. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: python2-renpy: Update to 7.4.0.Leo Prikler2021-02-07
| | | | | | | | | | * gnu/packages/game-development.scm (python2-renpy): Update to 7.4.0. (inputs): Move python2-pygame... (propagated-inputs): ... to here. Add python2-future. (#:phases)[install]: Infer python version from input. * gnu/packages/patches/renpy-use-system-fribidi.patch: Update to renpy 7.4.0. python2-renpy: propagate python inputs
* gnu: owncloud-client: Update to 2.7.5.3180.Julien Lepiller2021-02-07
| | | | | | | | * gnu/packages/sync.scm (owncloud-client): Update to 2.7.5.3180. [native-inputs]: Add cmake-extra-modules. [arguments]: Fix `delete-failing-tests' phase. [source]: Remove no longer needed snippet. * gnu/packages/patches/owncloud-disable-updatecheck.patch: Update patch.
* gnu: Add python-mediafile.Ricardo Wurmus2021-02-02
| | | | | | * gnu/packages/music.scm (python-mediafile): New variable. * gnu/packages/patches/python-mediafile-wavpack.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* gnu: obs: Use an environment variable for plugins location.Alexey Abramov2021-02-02
| | | | | | | | * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/video.scm (obs): Use it. * gnu/packages/patches/obs-modules-location.patch: Patch it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* Merge branch 'staging'Leo Famulari2021-02-01
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| * gnu: gst-plugins-good: Fix a test failure on 32-bit systems.Leo Famulari2021-01-31
| | | | | | | | | | | | * gnu/packages/patches/gst-plugins-good-fix-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gstreamer.scm (gst-plugins-good)[source]: Use it.
| * gnu: VLC: Remove obsolete patch.Leo Famulari2021-01-27
| | | | | | | | | | | | * gnu/packages/patches/vlc-qt-5.15.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/video.scm (vlc)[source]: Remove patch.
| * Merge branch 'master' into stagingLeo Famulari2021-01-25
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| * | gnu: mesa: Skip another test.Leo Famulari2021-01-18
| | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/mesa-skip-disk-cache-test.patch: Rename to ... * gnu/packages/patches/mesa-skip-tests.patch: ... new file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/gl.scm (mesa)[source]: Adjust accordingly.
| * | Merge branch 'master' into stagingEfraim Flashner2021-01-10
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| * \ \ Merge branch 'ungrafting' into stagingMarius Bakke2020-12-29
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| | * \ \ Merge branch 'master' into ungraftingMarius Bakke2020-12-29
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| * | | | | gnu: VLC: Fix build with Qt 5.15.Leo Famulari2020-12-23
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/vlc-qt-5.15.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/video.scm (vlc)[source]: Use it.
| * | | | | Merge branch 'ungrafting' into stagingMarius Bakke2020-12-21
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| | * | | | Merge branch 'master' into ungraftingMarius Bakke2020-12-21
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| * | | | | | gnu: sbc: Fix build on non-x86 architectures.Marius Bakke2020-12-21
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/sbc-fix-build-non-x86.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/linux.scm (sbc)[source](patches): New field.
| * | | | | | gnu: Qt: Update to 5.15.2.Marius Bakke2020-12-13
| |/ / / / / | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/qt.scm (qtbase, qtsvg, qtimageformats, qtx11extras, qtxmlpatterns, qtdeclarative, qtconnectivity, qtwebsockets, qtsensors, qtmultimedia, qtwayland, qtserialport, qtserialbus, qtwebchannel, qtwebglplugin, qtwebview, qtlocation, qttools, qtscript, qtquickcontrols, qtquickcontrols2, qtgraphicaleffects, qtgamepad, qtscxml, qtpurchasing, qtcharts, qtdatavis3d, qtnetworkauth, qtremoteobjects, qtspeech, qtwebengine): Update to 5.15.2. (qtbase)[source](patches): Remove obsolete patch. (qtwayland)[source](modules, snippet): Remove. [inputs]: Add VULKAN-HEADERS. (qtwebengine)[source](snippet): Adjust preserved files. [arguments]: Remove two obsolete phases. * gnu/packages/patches/qtbase-fix-krita-deadlock.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
| * | | | | Merge branch 'master' into ungraftingMarius Bakke2020-12-13
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| * | | | | | gnu: libssh2: Fix CVE-2019-17498.Efraim Flashner2020-12-09
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/ssh.scm (libssh2)[source]: Add patch. * gnu/packages/patches/libssh2-CVE-2019-17498.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
| * | | | | | gnu: Python: Fix CVE-2020-26116.Marius Bakke2020-12-08
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/python-CVE-2020-26116.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/python.scm (python-3.8)[source](patches): Add it.
| * | | | | | gnu: ghostscript: Fix CVE-2020-15900.Marius Bakke2020-12-08
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/ghostscript-CVE-2020-15900.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/ghostscript.scm (ghostscript)[source](patches): Add it.
| * | | | | | gnu: ghostscript: Fix build with FreeType 2.10.4.Marius Bakke2020-12-08
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This fixes a build failure from 79b31767d084a2feeb2edcb41ae863a0d534b847. * gnu/packages/patches/ghostscript-freetype-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/ghostscript.scm (ghostscript)[source](patches): Add it.
* | | | | | | gnu: vcflib: Fix generated pkg-config file.Efraim Flashner2021-02-01
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/bioinformatics.scm (vcflib)[arguments]: In custom generated pkg-config file, link with all needed libraries and fix linker library. * gnu/packages/patches/freebayes-devendor-deps.patch: Adjust accordingly.
* | | | | | | gnu: Add c++-gsl.Raghav Gururajan2021-01-31
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/cpp.scm (c++-gsl): New variable. * gnu/packages/patches/c++-gsl-find-system-gtest.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
* | | | | | | gnu: Remove avogadro.Leo Famulari2021-01-29
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This package fails to build and has been superseded by avogadro2. * gnu/packages/chemistry.scm (avogadro): Remove variable. * gnu/packages/patches/avogadro-boost148.patch, gnu/packages/patches/avogadro-eigen3-update.patch, gnu/packages/patches/avogadro-python-eigen-lib.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
* | | | | | | gnu: pinentry-tty: Update to 1.1.1.Tobias Geerinckx-Rice2021-01-27
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/gnupg.scm (pinentry-tty): Update to 1.1.1. (pinentry-efl)[source]: Remove patch. * gnu/packages/patches/pinentry-efl.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* | | | | | | gnu: icecat: Update to 78.7.0-guix0-preview1 [security fixes].Mark H Weaver2021-01-26
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Includes fixes for CVE-2021-23953, CVE-2021-23954, CVE-2020-26976, CVE-2021-23960, and CVE-2021-23964. * gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update. (icecat-source): Update gnuzilla commit, base version, and hashes. * gnu/packages/patches/icecat-makeicecat.patch: Adapt to new version.
* | | | | | | gnu: Mutt: Update to 2.0.5.Leo Famulari2021-01-25
| |_|_|_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/mutt-CVE-2021-3181.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/mail.scm (mutt): Update to 2.0.5. [source]: Remove obsolete patch.
* | | | | | gnu: Mutt: Fix CVE-2021-3181.Leo Famulari2021-01-20
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/mutt-CVE-2021-3181.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/mail.scm (mutt)[source]: Use it.
* | | | | | gnu: r-httpuv: Update to 1.5.5.Ricardo Wurmus2021-01-20
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/cran.scm (r-httpuv): Update to 1.5.5. [source]: Update patch name and remove unused modules. * gnu/packages/patches/r-httpuv-1.5.4-unvendor-libuv.patch: Rename this file... * gnu/packages/patches/r-httpuv-1.5.5-unvendor-libuv.patch: ...to this. * gnu/local.mk (dist_patch_DATA): Rename it.
* | | | | | gnu: idris: Update to 1.3.3.Eric Bavier2021-01-20
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/idris-disable-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/idris.scm (idris): Update to 1.3.3. [source]: Use the patch. [native-inputs]: Add ghc-cheapskate. [arguments]: Adjust cheapskate version bounds. Make auxiliary test script executable.
* | | | | | gnu: freebayes: Don't include vcflib sources.Efraim Flashner2021-01-19
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/bioinformatics.scm (freebayes)[native-inputs]: Remove vcflib-source, intervaltree-source. Move vcflib ... [inputs]: ... to here. [arguments]: Adjust 'patch-source and 'unpack-submodule-sources for changes in vendored code. * gnu/packages/patches/freebayes-devendor-deps.patch: Update patch.
* | | | | | gnu: freebayes: Update to 1.3.3.Efraim Flashner2021-01-17
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/bioinformatics.scm (freebayes): Update to 1.3.3. [source]: Add patch. Add snippet to remove vendored library. [build-system]: Switch to meson-build-system. [inputs]: Remove bamtools. Add fastahack, smithwaterman, tabixpp. [native-inputs]: Remove procps, python-2, tabixpp source, smithwaterman source, multichoose source, fsom source, filevercmp source, fastahack source, bash-tap source. Add bash-tap, grep, pkg-config, simde, vcflib. [arguments]: Drop make-flags. Don't delete 'configure phase. Delete custom 'fix-tests, 'build-tabixpp-and-vcflib, 'fix-makefiles, 'install phases. Adjust 'unpack-submodule-sources phase to changed native-inputs. Add new 'patch-source phase.
* | | | | | gnu: vcflib: Update to 1.0.2.Efraim Flashner2021-01-14
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/bioinformatics.scm (vcflib): Update to 1.0.2. [source]: Download using git-fetch. Remove patch. Update snippet to use packaged libraries. [build-system]: Switch to cmake-build-system. [inputs]: Add bzip2. [native-inputs]: Add package-source of fsom. [arguments]: Delete custom 'set-flags, 'install phases. Don't delete 'configure phase. Adjust 'unpack-submodule-sources phase. * gnu/packages/patches/vcflib-use-shared-libraries.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
* | | | | | gnu: Add ipxe.Vincent Legoll2021-01-14
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/bootloaders.scm (ipxe): New variable. * gnu/packages/patches/ipxe-reproducible-geniso.patch: New file … * gnu/local.mk (dist_patch_DATA): … add it. Co-authored-by: Tobias Geerinckx-Rice <me@tobias.gr> Co-authored-by: Brice Waegeneire <brice@waegenei.re> Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* | | | | | gnu: podofo: Update to 0.9.7.Tobias Geerinckx-Rice2021-01-11
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/pdf.scm (podofo): Update to 0.9.7. [source]: Remove patch. * gnu/packages/patches/podofo-cmake-3.12.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* | | | | | gnu: guile: Fix tests on emulated architectures.Mathieu Othacehe2021-01-11
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | The stack overflow test limits the virtual memory size using setrlimit with RLIMIT_AS argument. This is ignored when using QEMU transparent emulation, causing the test to crash. * gnu/packages/patches/guile-2.2-skip-so-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/guile.scm (guile-3.0-latest): Add it.
* | | | | | gnu: tipp10: Build with qt-5.Efraim Flashner2021-01-10
| |_|_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/education.scm (tipp10)[source]: Add new patches. [inputs]: Remove qt-4, sqlite. Add qtbase, qtmultimedia. * gnu/packages/patches/tipp10-disable-downloader.patch, gnu/packages/patches/tipp10-qt5.patch: New files. * gnu/local.mk (dist_patch_DATA): Register them.
* | | | | gnu: pulseview: Fix qt-5.15 compatibility.Efraim Flashner2021-01-10
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/electronics.scm (pulseview)[source]: Add patch. * gnu/packages/patches/pulseview-qt515-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
* | | | | gnu: emacs-scheme-complete: Update to 0.9.9.Nicolas Goaziou2021-01-09
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/emacs-xyz.scm (emacs-scheme-complete): Update to 0.9.9. * gnu/packages/patches/emacs-scheme-complete-scheme-r5rs-info.patch: Remove file. * gnu/local.mk: Update file.
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