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* gnu: file: Fix CVE-2018-10360.Efraim Flashner2018-12-24
| | | | | | | | | * gnu/packages/patches/file-CVE-2018-10360.patch: New file. * gnu/packages/file.scm (file)[replacement]: New field. (file/fixed): New variable. * gnu/packages/commencement.scm (file-boot0): Use 'package/inherit' to receive security fixes. * gnu/local.mk (dist_patch_DATA): Register it.
* gnu: datamash: Update to 1.4.Efraim Flashner2018-12-23
| | | | | | | * gnu/packages/datamash.scm (datamash): Update to 1.4. [source]: Remove patch. * gnu/packages/patches/datamash-arm-tests.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: Add emacs-wordnut.Mathieu Othacehe2018-12-21
| | | | | | * gnu/packages/patches/emacs-wordnut-require-adaptive-wrap.patch: New file. * gnu/local.mk (dist_patch_DATA): Add previous file. * gnu/packages/emacs.scm (emacs-wordnut): New package.
* gnu: meandmyshadow: Update to 10.5a.Kei Kebreau2018-12-20
| | | | | | | * gnu/packages/games.scm (meandmyshadow): Update to 10.5a. [source]: Remove patch. * gnu/local.mk (dist_patch_DATA): Unregister patch. * gnu/packages/patches/meandmyshadow-define-paths-earlier.patch: Delete file.
* gnu: stumpwm: Fix gnew command.Pierre Langlois2018-12-19
| | | | | | | | | | | The new release of StumpWM broken the interactive 'gnew' command. It was fixed upstream [0] and will be part of the next release. 0: https://github.com/stumpwm/stumpwm/pull/538 * gnu/packages/patches/stumpwm-fix-broken-read-one-line.patch: New file. * gnu/packages/lisp.scm (stumpwm)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Register it.
* gnu: ansible: Work around issues with Guix wrapper scripts.Arun Isaac2018-12-18
| | | | | | | | * gnu/packages/admin.scm (ansible)[source]: Remove ansible-wrap-program-hack.patch from patches. [arguments]: Add hide-wrapping and fix-symlinks phases. * gnu/packages/patches/ansible-wrap-program-hack.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Unregister it.
* gnu: glibc: Add patch implementing "pid/…" magic lookup on the Hurd.Ludovic Courtès2018-12-16
| | | | | | | | | | | | | | | | This patch is missing from glibc 2.28 and is needed to support /proc/self lookup when using the Hurd's procfs, which in turn is needed for our 'guile-relocatable.patch'. See <https://lists.gnu.org/archive/html/bug-hurd/2018-12/msg00024.html>. * gnu/packages/patches/glibc-hurd-magic-pid.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/base.scm (glibc)[arguments]: Add 'apply-hurd-patch' phase. [native-inputs]: Add "hurd-magic-pid-patch" input. * gnu/packages/cross-base.scm (cross-libc)[arguments]: Duplicate 'apply-hurd-patch' phase.
* gnu: qemu: Update to 3.1.0.Rutger Helling2018-12-13
| | | | | | | | * gnu/packages/virtualization.scm (qemu): Update to 3.1.0. [source]: Remove obsolete patches. * gnu/packages/patches/qemu-CVE-2018-16847.patch, gnu/packages/patches/qemu-CVE-2018-16867.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
* gnu: allegro: Fix compilation with Mesa >= 18.2.5.Rutger Helling2018-12-12
| | | | | | | * gnu/packages/game-development.scm (allegro)[source]: Add allegro-fix-compilation-mesa-18.2.5-and-later.patch. * gnu/packages/patches/allegro-fix-compilation-mesa-18.2.5-and-later.patch: New file.
* gnu: Borg: Update to 1.1.8.Leo Famulari2018-12-10
| | | | | | | * gnu/packages/backup.scm (borg): Update to 1.1.8. [source]: Remove obsolete patch. * gnu/packages/patches/borg-respect-storage-quota.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: openjdk: Make idlj respect SOURCE_DATE_EPOCH.Gábor Boskovits2018-12-09
| | | | | | * gnu/packages/patches/openjdk-10-idlj-reproducibility.patch: New file. * gnu/packages/java.scm (openjdk10)[source]: Use it. * gnu/locale.mk (dist_patch_DATA): Register it.
* gnu: polkit: Fix CVE-2018-19788.Leo Famulari2018-12-09
| | | | | | * gnu/packages/patches/polkit-CVE-2018-19788.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/polkit.scm (polkit)[source]: Use it.
* gnu: GCC@6: Update to 6.5.0.Marius Bakke2018-12-08
| | | | | | | | * gnu/packages/patches/gcc-libsanitizer-fix.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/gcc.scm (gcc-6): Update to 6.5.0. [source](patches): Drop obsolete patches. [source](snippet): Remove.
* Merge branch 'version-0.16.0'Ludovic Courtès2018-12-07
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| * gnu: quilt: Use shorter file names for patches.Ludovic Courtès2018-12-05
| | | | | | | | | | | | | | | | | | | | | | | | | | We were reaching the 99-character limit of POSIX tar. * gnu/packages/patches/quilt-compat-getopt-fix-option-with-nondigit-param.patch: Rename to... * gnu/packages/patches/quilt-getopt-nondigit-param.patch: ... this. * gnu/packages/patches/quilt-compat-getopt-fix-second-separator.patch: Rename to... * gnu/packages/patches/quilt-getopt-second-separator.patch: ... this. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/patchutils.scm (quilt)[source](patches): Likewise.
* | gnu: QEMU: Fix CVE-2018-16847 and CVE-2018-16867.Leo Famulari2018-12-06
| | | | | | | | | | | | | | * gnu/packages/patches/qemu-CVE-2018-16847.patch, gnu/packages/patches/qemu-CVE-2018-16867.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/virtualization.scm (qemu)[source]: Use them.
* | gnu: elogind: Update to 239.2.Stefan Stefanović2018-12-06
|/ | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/freedesktop.scm (elogind): Update to 239.2. [source](patches): Remove elogind-glibc-2.27.patch. [source](snippet): Remove snippet. [arguments]: <#:tests?>: Enable tests. <#:configure-flags>: Adjust build paths. Disable some tests. <#:make-flags>: Remove argument. <#:phases>[patch-locale-header]: Remove phase. <#:phases>[clean-runpath]: Add phase. <#:phases>[bootstrap]: Remove phase. <#:phases>[fix-pkttyagent-path]: Add phase. <#:phases>[fix-service-file]: Remove phase. <#:phases>[add-libcap-to-search-path]: Remove phase. <#:phases>[remove-uaccess-tag]: Remove phase. <#:phases>[change-pid-file-path]: Add phase. [build-system]: Switch to meson-build-system. [native-inputs]: Sort native-inputs list. Remove gperf package version constraint. Remove: autoconf, automake, libtool, intltool. Add: docbook-xml-4.2. [inputs]: Remove: linux-libre-headers. * gnu/packages/patches/elogind-glibc-2.27.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove patch file. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: Beets: Fix compatibility with Python 3.7.Leo Famulari2018-12-03
| | | | | | * gnu/packages/patches/beets-python-3.7-fix.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/music.scm (beets)[source]: Use it.
* Merge branch 'core-updates'Ludovic Courtès2018-12-03
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| * gnu: blender: Use newer ffmpeg.Efraim Flashner2018-11-30
| | | | | | | | | | | | | | | | * gnu/packages/graphics.scm (blender)[source]: Add patch for newer ffmpeg compatability. [inputs]: Replace ffmpeg-2.8 with ffmpeg. * gnu/packages/patches/blender-newer-ffmpeg.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
| * Merge branch 'master' into core-updatesMarius Bakke2018-11-29
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| * | gnu: lirc: Build reproducibly.Ludovic Courtès2018-11-29
| | | | | | | | | | | | | | | | | | * gnu/packages/patches/lirc-reproducible-build.patch: New file. * gnu/packages/lirc.scm (lirc)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
| * | gnu: rust: Shorten patch file name.Ludovic Courtès2018-11-29
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This file name was too long to fit in a tar archive. * gnu/packages/patches/rust-mdbook-support-reproducible-builds-by-forcing-window.search.patch: Rename to... * gnu/packages/patches/rust-reproducible-builds.patch: ... this. * gnu/packages/rust.scm (rust-1.27, rust): Adjust accordingly. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
| * | gnu: mono: Make build reproducible.Danny Milosavljevic2018-11-27
| | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/mono-mdoc-timestamping.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/mono.scm (mono)[source]: Use patch. [arguments]<#:phases>[make-reproducible]: New phase. <#:phases>[set-env]: Set SOURCE_DATE_EPOCH.
| * | gnu: aegisub: Fix build.Björn Höfling2018-11-25
| | | | | | | | | | | | | | | | | | * gnu/packages/patches/aegisub-boost68.patch: New file * gnu/local.mk: Add it. * gnu/packages/video.scm (aegisub)[source]: Use patch.
| * | gnu: randomjungle: Do not build static binaries.Marius Bakke2018-11-25
| | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/randomjungle-disable-static-build.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/machine-learning.scm (randomjungle)[source](patches): Add it. [arguments]: Add "--disable-static" to #:configure-flags.
| * | Merge branch 'master' into core-updatesMarius Bakke2018-11-24
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| * | | gnu: podofo: Add patch to fix build.Ricardo Wurmus2018-11-22
| | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/podofo-cmake-3.12.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/pdf.scm (podofo)[source]: Add patch.
| * | | gnu: python-scikit-learn: Update to 0.20.1.Marius Bakke2018-11-22
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/python-scikit-learn-fix-test-non-determinism.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/machine-learning.scm (python-scikit-learn): Update to 0.20.1. [source](patches): Remove. [arguments]: Skip network tests with pytest instead of deleting files. Make sure $HOME is writable. (python2-scikit-learn): Rewrite in terms of PACKAGE-WITH-PYTHON2.
| * | | Merge branch 'master' into core-updatesMarius Bakke2018-11-22
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| * \ \ \ Merge remote-tracking branch 'origin/master' into core-updatesEfraim Flashner2018-11-21
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| * | | | | gnu: emacs-pdf-tools: Fix build with recent Poppler.Ludovic Courtès2018-11-21
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/emacs-pdf-tools-poppler.patch: New file. * gnu/packages/emacs.scm (emacs-pdf-tools)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
| * | | | | gnu: casync: Fix build with glibc 2.28.Ludovic Courtès2018-11-21
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/casync-renameat2-declaration.patch: New file. * gnu/packages/sync.scm (casync)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
| * | | | | Merge branch 'master' into core-updatesMarius Bakke2018-11-20
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| * | | | | | gnu: qt@5: Fix build failure on glibc 2.28.Ludovic Courtès2018-11-18
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/qt-5-renameat2.patch: New file. * gnu/packages/qt.scm (qt)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
| * | | | | | Merge branch 'master' into core-updatesMarius Bakke2018-11-14
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| * | | | | | | gnu: python-cffi: Fix test failure on i686.Marius Bakke2018-11-11
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/python-cffi-x87-stack-clean.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/libffi.scm (python-cffi)[source](patches): Add it.
| * | | | | | | gnu: python-paste: Update to 3.0.4.Efraim Flashner2018-11-11
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/python-web.scm (python-paste): Update to 3.0.4. [source]: Remove patch, add snippet to remove one test. [native-inputs]: Add python-pytest, python-pytest-runner. * gnu/packages/patches/python-paste-remove-website-test.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
| * | | | | | | gnu: python-networkx2: Remove variable.Efraim Flashner2018-11-11
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/python.scm (python-networkx2): Remove variable. * gnu/packages/patches/python-networkx2-reproducible-build.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
| * | | | | | | Merge branch 'master' into core-updatesMarius Bakke2018-11-09
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| * \ \ \ \ \ \ \ Merge branch 'master' into core-updatesMarius Bakke2018-11-07
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| * | | | | | | | | gnu: ceph: Update to 13.2.2.Marius Bakke2018-11-07
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/ceph-skip-unittest_blockdev.patch: Adjust for 13.2.2. * gnu/packages/patches/ceph-rocksdb-compat.patch: Delete file. * gnu/packages/patches/ceph-detect-rocksdb.patch, gnu/packages/patches/ceph-volume-respect-PATH.patch: New files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/storage.scm (ceph): Update to 13.2.2. [source]: Don't remove src/dpdk, which has been moved to src/spdk/dpdk and is purged elsewhere. Drop bundled rapidjson. Adjust patch list. [arguments]: Add "-DWITH_MGR_DASHBOARD_FRONTEND=OFF" and "-DWITH_SPDK=OFF" to #:configure-flags. Drop obsolete "-DWITH_EMBEDDED". Add workaround for <https://bugs.gnu.org/30756>. Remove obsolete test substitution. Rework 'wrap-python-script' to be less verbose and wrap more scripts. [native-inputs]: Add GCC-7. [inputs]: Add OATH-TOOLKIT, RAPIDJSON and PYTHON2-SIX.
| * | | | | | | | | gnu: qtbase: Remove obsolete patch.Marius Bakke2018-11-06
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This patch is no longer needed since 7930cfc98923eda64ec4a37d56b19f96f86f5f59 was merged to core-updates. * gnu/packages/patches/qtbase-glibc-compat.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/qt.scm (qtbase)[source](patches): Drop it.
| * | | | | | | | | Merge branch 'master' into core-updatesMarius Bakke2018-11-05
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| * \ \ \ \ \ \ \ \ \ Merge branch 'master' into core-updatesMarius Bakke2018-10-22
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| * \ \ \ \ \ \ \ \ \ \ Merge branch 'master' into core-updatesMarius Bakke2018-10-21
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| * | | | | | | | | | | | gnu: swig: Fix build on i686.Marius Bakke2018-10-18
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/swig-guile-gc.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/swig.scm (swig)[source](patches): Use it.
| * | | | | | | | | | | | gnu: Python: Adjust grafts for core-updates merge.Marius Bakke2018-10-17
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This adjust the grafts from a55ebe2e3a7b438b4eec06c594440d3a0fb06a25 and 90aeaee861845142843a0f988fa4ff016c723cdb to apply to Python 2.7.15 and 3.7.0. * gnu/packages/patches/python2-CVE-2018-1060.patch, gnu/packages/patches/python2-CVE-2018-1061.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. * gnu/packages/python.scm (python-2/fixed): Remove patches that are already present in 2.7.15. (python-3/fixed): Remove obsolete phase.
| * | | | | | | | | | | | Merge branch 'master' into core-updatesMarius Bakke2018-10-17
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| * | | | | | | | | | | | | * gnu: clang-runtime: Fix typo in patch name.Efraim Flashner2018-10-15
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This is a follow-up to 0627f93db6a57e7411cb332b7509f35753b149e4. * gnu/packages/patches/libsantitizer-ustat-fix.patch: Rename to gnu/packages/patches/libsanitizer-ustat-fix.patch. * gnu/packages/llvm.scm (clang-runtime@3.7, clang-runtime@3.8, clang-runtime@3.9)[patches]: Fix patch name.
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