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* gnu: mupdf: Modify CVE-2016-8674 patch to apply to 1.9a.Marius Bakke2016-10-26
| | | | | | | | | | The fix from upstream did not apply cleanly due to many context changes. This was adapted by cloning mupdf 1.9a from git and fixing conflicts after applying our patches and cherry-picking upstream commit 1e03c06. This is a follow-up to 47a04fca999b91309d196afc9ebf4d8ac6f2083f. * gnu/packages/patches/mupdf-CVE-2016-8674.patch: Adapt to 1.9a.
* gnu: notmuch: Update to 0.23.1.Marius Bakke2016-10-26
| | | | | | | * gnu/packages/patches/notmuch-emacs-25-compatibility-fix.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/mail.scm (notmuch): Update to 0.23.1. Remove patch.
* gnu: mupdf: Fix CVE-2016-8674.Kei Kebreau2016-10-25
| | | | | | * gnu/packages/patches/mupdf-CVE-2016-8674.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/pdf.scm (mupdf): Use it.
* gnu: coda: Remove bundled libraries.Thomas Danckaert2016-10-25
| | | | | | | | | | * gnu/packages/maths.scm (coda): Remove bundled libraries. [source]: Add patch and snippet to remove bundled zlib, pcre and expat. [inputs]: Add system zlib, pcre and expat. * gnu/packages/patches/coda-use-system-libs.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: linux-libre@4.1: Update to 4.1.35.Mark H Weaver2016-10-24
| | | | | | | * gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.35. Remove patch. * gnu/packages/patches/linux-libre-4.1-CVE-2016-5195.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: Add hdf-eos2.Thomas Danckaert2016-10-24
| | | | | | | | | | * gnu/packages/maths.scm (hdf-eos2): New variable. * gnu/packages/patches/hdf-eos2-build-shared.patch: New file. * gnu/packages/patches/hdf-eos2-remove-gctp.patch: New file. * gnu/packages/patches/hdf-eos2-fortrantests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patches. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: musl: Fix CVE-2016-8859.Leo Famulari2016-10-23
| | | | | | * gnu/packages/patches/musl-CVE-2016-8859.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/musl.scm (musl)[source]: Use it.
* gnu: hop: Update to 2.5.1.Efraim Flashner2016-10-23
| | | | | | | * gnu/packages/scheme.scm (hop): Update to 2.5.1. [source]: Remove patch. * gnu/packages/patches/hop-bigloo-4.0b.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: linux-libre@4.1: Add fix for CVE-2016-5195.Mark H Weaver2016-10-22
| | | | | | * gnu/packages/patches/linux-libre-4.1-CVE-2016-5195.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/linux.scm (linux-libre-4.1): Add patch.
* gnu: slim: Fix line numbers in slim-login.patch.Christopher Allan Webber2016-10-21
| | | | | | This was causing build failures. * gnu/packages/patches/slim-login.patch: Fix line numbers.
* gnu: slim: Display login message.Eric Bavier2016-10-20
| | | | | | * gnu/packages/patches/slim-login.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/display-managers.scm (slim)[source]: Use it.
* gnu: slim: Do not reset session after failed login.Eric Bavier2016-10-20
| | | | | | * gnu/packages/patches/slim-reset.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/display-managers.scm (slim)[source]: Use it.
* gnu: openssh: Fix CVE-2016-8858.Leo Famulari2016-10-19
| | | | | | * gnu/packages/patches/openssh-memory-exhaustion.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/ssh.scm (openssh)[source]: Use it.
* gnu: lftp: Update to 4.7.3.Tobias Geerinckx-Rice2016-10-19
| | | | | | | | | | | * gnu/packages/ftp.scm (lftp): Update to 4.7.3. [source]: Use HTTPS. Remove patch. [arguments]: Add ‘disable-impure-tests’ phase. Add #:configure-flags with explicit location of readline headers. [home-page]: Use HTTPS. * gnu/packages/patches/lftp-dont-save-unknown-host-fingerprint.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: notmuch: Enable tests.Marius Bakke2016-10-19
| | | | | | | | | | | * gnu/packages/patches/notmuch-emacs-25-compatibility-fix.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/mail.scm (notmuch)[source]: Use patch. [arguments]: Add verbose make flags. Add phase 'patch-notmuch-lib.el' to fix hard-coded /bin/sh. Add 'prepare-test-environment' phase to patch test shebangs and set environment. [native-inputs]: Change from 'emacs-minimal' to 'emacs-no-x'. Add dtach, gnupg, man, perl and which.
* gnu: kobodeluxe: Indicate origin of kobodeluxe-paths.patch.Christopher Allan Webber2016-10-18
| | | | | * gnu/packages/patches/kobodeluxe-paths.patch: Update header, pointing to Debian tarball for provenance.
* gnu: Add kobodeluxe.Stephen Webber2016-10-18
| | | | | | | | | | | * gnu/packages/games.scm (kobodeluxe): New variable. * gnu/packages/patches/kobodeluxe-paths.patch: New file. * gnu/packages/patches/kobodeluxe-enemies-pipe-decl.patch: New file. * gnu/packages/patches/kobodeluxe-const-charp-conversion.patch: New file. * gnu/packages/patches/kobodeluxe-manpage-minus-not-hyphen.patch: New file. * gnu/packages/patches/kobodeluxe-midicon-segmentation-fault.patch: New file. * gnu/packages/patches/kobodeluxe-graphics-window-signed-char.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
* gnu: torsocks: Update to 2.2.0.ng02016-10-18
| | | | | | | | | | | | | | | * gnu/packages/patches/torsocks-dns-test.patch: Delete file. * gnu/local.mk: Remove it. * gnu/packages/tor.scm (torsocks): Update to 2.2.0. [source]: Remove patch. Change method from 'git-fetch' to 'url-fetch'. Remove 'file-name'. [arguments]: Remove 'bootstrap' phase. [native-inputs]: Remove autoconf, automake and libtool. Also remove obsoleted perl-test-harness. [home-page]: Use https URL. (define-module): Don't import perl. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: jasper: Update to 1.900.5.Efraim Flashner2016-10-17
| | | | | | | | | | | | | | | | | | | | * gnu/packages/image.scm (jasper): Update to 1.900.5. [source]: Remove patches. [native-inputs]: Remove unzip. * gnu/packages/patches/jasper-CVE-2007-2721.patch, gnu/packages/patches/jasper-CVE-2008-3520.patch, gnu/packages/patches/jasper-CVE-2008-3522.patch, gnu/packages/patches/jasper-CVE-2011-4516-and-CVE-2011-4517.patch, gnu/packages/patches/jasper-CVE-2014-8137.patch, gnu/packages/patches/jasper-CVE-2014-8138.patch, gnu/packages/patches/jasper-CVE-2014-8157.patch, gnu/packages/patches/jasper-CVE-2014-8158.patch, gnu/packages/patches/jasper-CVE-2014-9029.patch, gnu/packages/patches/jasper-CVE-2016-1577.patch, gnu/packages/patches/jasper-CVE-2016-1867.patch, gnu/packages/patches/jasper-CVE-2016-2089.patch, gnu/packages/patches/jasper-CVE-2016-2116.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
* gnu: irrlicht: Update to 1.8.4.Ricardo Wurmus2016-10-17
| | | | | | | | * gnu/packages/games.scm (irrlicht): Update to 1.8.4. [arguments]: Delete phase "apply-patch/mesa-10-fix". [native-inputs]: Remove "patch/mesa-10-fix". * gnu/packages/patches/irrlicht-mesa-10.patch: Delete file. * gnu/local.mk (dist_path_DATA): Remove irrlicht patch.
* gnu: artanis: Remove implied $(DESTDIR) usage.Adonay Felipe Nogueira2016-10-17
| | | | | | | | | * gnu/packages/patches/artanis-fix-Makefile.in.patch: New file. * gnu/local.mk (dist_patch_DATA): Register patch. * gnu/packages/guile.scm (artanis)[source]: Use patch. [arguments]: Remove DESTDIR from #:make-flags. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: node: Update to 6.8.0.Al McElrath2016-10-17
| | | | | | | | | | | | | | Remove <https://debbugs.gnu.org/23744> and <https://debbugs.gnu.org/23723> workaround. * gnu/packages/node.scm (node): Update to 6.8.0. (node)[arguments]: Disabled more tests. Remove custom 'patch-shebangs' phase. Manually patch npm script shebang in new 'patch-npm-shebang' phase. * gnu/packages/patches/node-9077.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patches. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: hdf4: Fix non-x86 architectures.Andreas Enge2016-10-16
| | | | | | * gnu/packages/patches/hdf4-architectures.patch: New file. * gnu/local.mk (dist_patch_DATA): Register patch. * gnu/packages/maths.scm (hdf4)[source]: Add patch.
* gnu: Add arm-none-eabi-gcc-6.Theodoros Foradis2016-10-16
| | | | | | | * gnu/packages/embedded.scm (gcc-arm-none-eabi-6): New variable. * gnu/packages/patches/gcc-6-arm-none-eabi-multilib.patch: New file. * gnu/packages/patches/gcc-6-cross-environment-variables.patch: New file. * gnu/local.mk (dist_patch_DATA): Add the patches.
* gnu: gd: Fix CVE-2016-8670.Leo Famulari2016-10-15
| | | | | | * gnu/packages/patches/gd-CVE-2016-8670.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gd.scm (gd)[source]: Use it.
* gnu: freeimage: Fix CVE-2016-5684.Efraim Flashner2016-10-14
| | | | | | * gnu/packages/image.scm (freeimage)[source]: Add patch. * gnu/packages/patches/freeimage-CVE-2016-5684.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
* gnu: ghostscript: Fix CVE-2013-5653 and CVE-2016-{7976,7978,7979,8602}.Mark H Weaver2016-10-13
| | | | | | | | | | | | * gnu/packages/patches/ghostscript-CVE-2013-5653.patch, gnu/packages/patches/ghostscript-CVE-2016-7976.patch, gnu/packages/patches/ghostscript-CVE-2016-7978.patch, gnu/packages/patches/ghostscript-CVE-2016-7979.patch, gnu/packages/patches/ghostscript-CVE-2016-8602.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/ghostscript.scm (ghostscript)[replacement]: New field. (ghostscript/fixed): New variable. (ghostscript/x): Inherit 'ghostscript/fixed'.
* gnu: Add hdf4Thomas Danckaert2016-10-12
| | | | | | | | | | | * gnu/packages/maths.scm (hdf4, hdf4-alt): New variables. * gnu/packages/patches/hdf4-reproducibility.patch: New file. * gnu/packages/patches/hdf4-shared-fortran.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patches. Co-Authored-By: Jeremy Robst <jpro@bas.ac.uk> Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: icecat: Update to 45.3.0-gnu1-beta. Add fixes from Firefox ESR 45.4.0.Mark H Weaver2016-10-11
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Includes fixes for CVE-2016-5250, CVE-2016-5257, CVE-2016-5261, CVE-2016-5270, CVE-2016-5272, CVE-2016-5274, CVE-2016-5276, CVE-2016-5277, CVE-2016-5278, CVE-2016-5280, CVE-2016-5281, and CVE-2016-5284. * gnu/packages/gnuzilla.scm (mozilla-patch): New procedure. (icecat): Update to 45.3.0-gnu1. [source]: Add alternate source URI for the beta release. Update patches. [inputs]: Replace 'sqlite' input with a customized sqlite with SQLITE_ENABLE_DBSTAT_VTAB support. [native-inputs]: Add 'which'. * gnu/packages/patches/icecat-avoid-bundled-includes.patch: Rename to... * gnu/packages/patches/icecat-avoid-bundled-libraries.patch: ... and adapt to version 45. * gnu/packages/patches/icecat-CVE-2016-2818-pt1.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt2.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt3.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt4.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt5.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt6.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt7.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt8.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt9.patch, gnu/packages/patches/icecat-CVE-2016-2819.patch, gnu/packages/patches/icecat-CVE-2016-2821.patch, gnu/packages/patches/icecat-CVE-2016-2824.patch, gnu/packages/patches/icecat-CVE-2016-2828.patch, gnu/packages/patches/icecat-CVE-2016-2831.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu: qemu: Patch CVE-2016-857{6,7,8}.Efraim Flashner2016-10-11
| | | | | | | | * gnu/packages/qemu.scm (qemu)[source]: Add patches. * gnu/packages/patches/qemu-CVE-2016-8576.patch, gnu/packages/patches/qemu-CVE-2016-8577.patch, gnu/packages/patches/qemu-CVE-2016-8578.patch: New files. * gnu/local.mk (dist_patch_DATA): Register them.
* gnu: wpa-supplicant: Update to 2.6.Marius Bakke2016-10-09
| | | | | | | | | | | | | | | | | | * gnu/packages/admin.scm (wpa-supplicant-minimal)[source]: Update to 2.6. Remove 'patches' field. * gnu/packages/patches/wpa-supplicant-CVE-2015-5310.patch, gnu/packages/patches/wpa-supplicant-CVE-2015-5314.patch, gnu/packages/patches/wpa-supplicant-CVE-2015-5315.patch, gnu/packages/patches/wpa-supplicant-CVE-2015-5316.patch, gnu/packages/patches/wpa-supplicant-CVE-2016-4476.patch, gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt1.patch, gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt2.patch, gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt3.patch, gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt4.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: libupnp: Fix CVE-2016-6255.Leo Famulari2016-10-09
| | | | | | * gnu/packages/patches/libupnp-CVE-2016-6255.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/libupnp.scm (libupnp): Use it.
* gnu: Add cl-clx.Andy Patterson2016-10-08
| | | | | | | | * gnu/packages/lisp.scm (cl-clx, sbcl-clx, ecl-clx): New variables. * gnu/packages/patches/clx-remove-demo.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: 宋文武 <iyzsong@gmail.com>
* gnu: Add hdf-eos5.Thomas Danckaert2016-10-06
| | | | | | | | | | | * gnu/packages/maths.scm (hdf-eos5): New variable. * gnu/packages/patches/hdf-eos5-build-shared.patch: New file. * gnu/packages/patches/hdf-eos5-remove-gctp.patch: New file. * gnu/packages/patches/hdf-eos5-fix-szip.patch: New file. * gnu/packages/patches/hdf-eos5-fortrantests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patches. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: libxvmc: Fix CVE-2016-7953.Leo Famulari2016-10-05
| | | | | | | * gnu/packages/patches/libxvmc-CVE-2016-7953.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (libxvmc)[replacement]: New field. (libxvmc/fixed): New variable.
* gnu: libxv: Fix CVE-2016-5407.Leo Famulari2016-10-05
| | | | | | | * gnu/packages/patches/libxv-CVE-2016-5407.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (libxv)[replacement]: New field. (libxv/fixed): New variable.
* gnu: libxtst: Fix CVE-2016-{7951,7952}.Leo Famulari2016-10-05
| | | | | | | * gnu/packages/patches/libxtst-CVE-2016-7951-CVE-2016-7952.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (libxtst)[replacement]: New field. (libxtst/fixed): New variable.
* gnu: libxrender: Fix CVE-2016-{7949,7950}.Leo Famulari2016-10-05
| | | | | | | | * gnu/packages/patches/libxrender-CVE-2016-7949.patch, gnu/packages/patches/libxrender-CVE-2016-7950.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/xorg.scm (libxrender)[replacement]: New field. (libxrender/fixed): New variable.
* gnu: libxrandr: Fix CVE-2016-{7947,7948}.Leo Famulari2016-10-05
| | | | | | | * gnu/packages/patches/libxrandr-CVE-2016-7947-CVE-2016-7948.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (libxrandr)[replacement]: New field. (libxrandr/fixed): New variable.
* gnu: libxi: Fix CVE-2016-{7945,7946}.Leo Famulari2016-10-05
| | | | | | | * gnu/packages/patches/libxi-CVE-2016-7945-CVE-2016-7946.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (libxi)[replacement]: New field. (libxi/fixed): New variable.
* gnu: libxfixes: Fix CVE-2016-7944.Leo Famulari2016-10-05
| | | | | | | * gnu/packages/patches/libxfixes-CVE-2016-7944.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (libxfixes)[replacement]: New field. (libxfixes/fixed): New variable.
* gnu: libx11: Fix CVE-2016-{7942,7943}.Leo Famulari2016-10-05
| | | | | | | | * gnu/packages/patches/libx11-CVE-2016-7942.patch, gnu/packages/patches/libx11-CVE-2016-7943.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/xorg.scm (libx11)[replacement]: New field. (libx11/fixed): New variable.
* gnu: gsl: Disable failing tests on i686.Ludovic Courtès2016-10-05
| | | | | | * gnu/packages/patches/gsl-test-i686.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/maths.scm (gsl)[source](patches): New field.
* gnu: rush: Update to 1.8.Ludovic Courtès2016-10-04
| | | | | | | | * gnu/packages/rush.scm (rush): Update to 1.8. [source]: Remove 'patches'. * gnu/packages/patches/cpio-gets-undeclared.patch, gnu/packages/patches/rush-CVE-2013-6889.patch: Remove. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu: metabat: Update to 0.32.4-1.cbdca756.Ben Woodcroft2016-10-04
| | | | | | * gnu/packages/bioinformatics.scm (metabat): Update to 0.32.4-1.cbdca756. * gnu/packages/patches/metabat-remove-compilation-date.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* gnu: libarchive: Fix several security issues.Leo Famulari2016-10-03
| | | | | | | | | | * gnu/packages/backup.scm (libarchive)[replacement]: New field. (libarchive/fixed): New variable. * gnu/packages/patches/libarchive-7zip-heap-overflow.patch, gnu/packages/patches/libarchive-fix-symlink-check.patch, gnu/packages/patches/libarchive-fix-filesystem-attacks.patch, gnu/packages/patches/libarchive-safe_fprintf-buffer-overflow.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them.
* gnu: gd: Fix CVE-2016-7568.Leo Famulari2016-10-01
| | | | | | * gnu/packages/patches/gd-CVE-2016-7568.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gd.scm (gd)[source]: Use it.
* gnu: Add quickswitch-i3.Ivan Vilata i Balaguer2016-10-01
| | | | | | | | * gnu/packages/wm.scm (quickswitch-i3): New variable. * gnu/packages/patches/quickswitch-fix-dmenu-check.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Signed-off-by: 宋文武 <iyzsong@gmail.com>
* gnu: expat: Fix regression caused by fix for CVE-2016-0718.Leo Famulari2016-09-27
| | | | | | | | | * gnu/packages/xml.scm (expat)[replacement]: New field. (expat/fixed): New variable. * gnu/packages/patches/expat-CVE-2016-0718-fix-regression.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: azr3: Fix libsigc++ build errors.Ricardo Wurmus2016-09-26
| | | | | | | * gnu/packages/audio.scm (azr3)[arguments]: Add "-std=gnu++11" flag. [source]: Add patch. * gnu/packages/patches/azr3.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.