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* gnu: Add missing freeimage patch.Efraim Flashner2018-04-13
| | | | | | | This is a follow-up to a5d4c96b8d90b8bb87e07bd6a7be78991db91bc9. * gnu/packages/patches/freeimage-unbundle.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
* gnu: datamash: Fix tests on ARM systems.Eric Bavier2018-04-12
| | | | | | * gnu/packages/patches/datamash-arm-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/datamash.scm (datamash)[source]: Use it.
* gnu: cool-retro-term: Update to 1.0.1.Eric Bavier2018-04-12
| | | | | | | | | * gnu/packages/terminals.scm (cool-retro-term): Update to 1.0.1. [source]: Programmatically remove fonts. [arguments]: Simplify 'configure phase and use 'invoke'. Add 'install-man phase. 'let*' -> 'let' where possible. * gnu/packages/patches/cool-retro-term-remove-non-free-fonts.patch: Delete. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: llvm, clang: Update to 6.0.0.Marius Bakke2018-04-06
| | | | | | | | | | | | | * gnu/packages/llvm.scm (llvm, clang-runtime, clang): Update to 6.0.0. (clang-from-llvm)(patches): Set to empty list. [arguments]: Adjust substitutions depending on major version. (llvm-3.8, clang-runtime-3.8, clang-3.8): New public variables. (clang-3.7, clang-3.6, clang-3.5)(patches): Add 'clang-3.5-libc-search-path.patch'. (clang-3.9.1)(patches): Add 'clang-3.8-libc-search-path.patch'. * gnu/packages/patches/clang-6.0-libc-search-path.patch: New file. * gnu/packages/patches/clang-libc-search-path.patch: Rename to ... * gnu/packages/patches/clang-3.5-libc-search-path.patch: ... this. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu: 4store: Remove preprocessor directive.Roel Janssen2018-04-04
| | | | | | | * gnu/packages/databases.scm (4store): Add patch to remove preprocessor directive. * gnu/packages/patches/4store-unset-preprocessor-directive.patch: New file. * gnu/local.mk: Register patch.
* gnu: racket: Patch xform compilation errors.Christopher Lemmer Webber2018-04-02
| | | | | | | * gnu/packages/patches/gnu/packages/patches/racket-fix-xform-issue.patch: Renamed from gnu/packages/patches/racket-minus_zero_p-disable-xform.patch. Switch to upstream patch in Racket. * gnu/packages/scheme.scm (racket): Update to renamed patch.
* gnu: racket: Update to 6.12.Christopher Lemmer Webber2018-04-02
| | | | | * gnu/packages/patches/racket-minus_zero_p-disable-xform.patch: New file. * gnu/packages/scheme.scm (racket): Update version and patch.
* gnu: libgnomeui: Avoid store file names in patch.Ludovic Courtès2018-03-31
| | | | | | | | This placates 'assert-no-store-file-names', which would prevent 'make dist' from succeeding. * gnu/packages/patches/libgnomeui-utf8.patch: Replace store file names with ellipses.
* gnu: Add delly.Roel Janssen2018-03-30
| | | | | | | | * gnu/packages/bioinformatics.scm (delly): New variable. * gnu/packages/patches/delly-use-system-libraries.patch: New file. * gnu/local.mk: Include delly-use-system-libraries.patch. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: libusb-for-axoloti: Update patch.Ricardo Wurmus2018-03-29
| | | | | * gnu/packages/patches/libusb-for-axoloti.patch: Update context for libusb 1.0.22.
* gnu: mupdf: Fix CVE-2018-{6544,1000051}.Leo Famulari2018-03-27
| | | | | | | * gnu/packages/patches/mupdf-CVE-2018-1000051.patch, gnu/packages/patches/mupdf-CVE-2018-6544.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/pdf.scm (mupdf)[source]: Use them.
* gnu: translate-shell: Update to 0.9.6.7.Oleg Pykhalov2018-03-26
| | | | | | | * gnu/packages/patches/translate-shell-fix-curl-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/dictionaries.scm (translate-shell): Update to 0.9.6.7. [source](patches): Add it. [home-page]: Append slash.
* gnu: hwloc@2: Update to 2.0.1.Ludovic Courtès2018-03-26
| | | | | | | * gnu/packages/mpi.scm (hwloc-2.0): Update to 2.0.1. [source]: Remove 'patches'. * gnu/packages/patches/hwloc-tests-without-sysfs.patch: Remove. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu: classpath: Add aarch64-linux support.Efraim Flashner2018-03-26
| | | | | | | * gnu/packages/java.scm (classpath-bootstrap, classpath-0.99)[source]: Add patch. * gnu/packages/patches/classpath-aarch64-support.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
* gnu: links: Update to 2.15.Tobias Geerinckx-Rice2018-03-25
| | | | | | | * gnu/packages/web-browsers.scm (links): Update to 2.15. [source]: Remove patch for fixed CVE. * gnu/packages/patches/links-CVE-2017-11114.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: Add lyx.Danny Milosavljevic2018-03-22
| | | | | | * gnu/packages/patches/lyx-2.2.3-fix-test.patch: New file. * gnu/local.mk: Add it. * gnu/packages/tex.scm (lyx): New variable.
* gnu: shepherd: Update to 0.4.0.Ludovic Courtès2018-03-22
| | | | | | | | | * gnu/packages/admin.scm (shepherd): Update to 0.4.0. Remove patches. * gnu/packages/patches/shepherd-close-fds.patch, gnu/packages/patches/shepherd-herd-status-sorted.patch: Remove. * gnu/local.mk (dist_patch_DATA): Remove them. * gnu/services/admin.scm (%default-rotations): Remove /var/log/shepherd.log.
* Merge branch 'staging'Marius Bakke2018-03-20
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| * Merge branch 'master' into stagingMarius Bakke2018-03-18
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| * \ Merge branch 'staging-next' into stagingMarius Bakke2018-03-12
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| | * | gnu: giflib: Make "reallocarray" private, solve glibc@2.26 conflict.Hartmut Goebel2018-03-08
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Rename the function and move the declaration from gif_lib.h to gif_lib_private.h to solve conflicts when some .c-file #includes both stdlib.h and gif_lib.h. See also https://sourceforge.net/p/giflib/bugs/110/ * gnu/packages/patches/giflib-make-reallocarray-private.patch: New file * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/image.scm(giflib)[source](patches): New field.
| * | | Merge branch 'master' into stagingMarius Bakke2018-03-08
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| * | | gnu: gnome-todo: Fix compatibility with libical >= 3.0.Marius Bakke2018-03-07
| | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/gnome-todo-libical-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/gnome.scm (gnome-todo)[source](patches): Use it.
| * | | Merge branch 'master' into stagingLeo Famulari2018-03-06
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| * \ \ \ Merge branch 'master' into stagingMarius Bakke2018-03-01
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| * | | | | gnu: json-glib: Fix 32-bit test failures.Marius Bakke2018-02-25
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/json-glib-fix-tests-32bit.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/gnome.scm (json-glib)[source](patches): New field.
| * | | | | Merge branch 'master' into stagingMarius Bakke2018-02-24
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| * \ \ \ \ \ Merge branch 'master' into stagingMarius Bakke2018-02-20
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| * | | | | | | gnu: gtk+@2: Update to 2.24.32.Marius Bakke2018-02-20
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/gtk2-fix-failing-test.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/gtk.scm (gtk+-2): Update to 2.24.32. [source]: Remove 'gtk2-fix-failing-test.patch'.
* | | | | | | | gnu: bash-completion: Update to 2.8.Tobias Geerinckx-Rice2018-03-19
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/bash.scm (bash-completion): Update to 2.8. * gnu/packages/patches/bash-completion-directories.patch: Update context.
* | | | | | | | gnu: libtirpc: Update to 1.0.3.Tobias Geerinckx-Rice2018-03-19
| |_|_|_|_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/onc-rpc.scm (libtirpc): Update to 1.0.3. [source]: Remove patch. * gnu/packages/patches/libtirpc-missing-headers.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* | | | | | | gnu: java-simple-xml: Fix java8 test failures.Gábor Boskovits2018-03-18
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/javas-simple-xml-fix-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/java.scm (java-simple-xml)[source](patches): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* | | | | | | gnu: util-linux: Fix CVE-2018-7738.Leo Famulari2018-03-16
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/util-linux-CVE-2018-7738.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/linux.scm (util-linux)[replacement]: New field. (util-linux/fixed): New variable.
* | | | | | | gnu: shadow: Fix CVE-2018-7169.Leo Famulari2018-03-15
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/shadow-CVE-2018-7169.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/admin.scm (shadow)[source]: Use it.
* | | | | | | gnu: lrzip: Fix CVE-2017-8842.Tobias Geerinckx-Rice2018-03-12
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/compression.scm (lrzip)[source]: Add patch. * gnu/packages/patches/lrzip-CVE-2017-8842.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* | | | | | | gnu: java-jeromq: Fix tests.Gábor Boskovits2018-03-11
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/java-jeromq-fix-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/java.scm (java-jeromq)[source](patches): Add it. [arguments](#test-exclude): Disable more failing tests.
* | | | | | | gnu: zsh: Fix CVE-2018-{7548,7549}.Leo Famulari2018-03-10
| |_|_|_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/zsh-CVE-2018-7548.patch, gnu/packages/patches/zsh-CVE-2018-7549.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/shells.scm (zsh)[source]: Use them.
* | | | | | gnu: glibc: Add a comment in the patch.Ludovic Courtès2018-03-07
| | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/glibc-allow-kernel-2.6.32.patch: Add a comment.
* | | | | | gnu: thefuck: Update to 3.25.Eric Bavier2018-03-06
| |_|_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/admin.scm (thefuck): Update to 3.25 [inputs]: Add python-pyte. [native-inputs]: Remove python-setuptools. * gnu/packages/patches/thefuck-test-environ.patch: Adjust to latest source.
* | | | | gnu: ceph: Update to 12.2.4.Marius Bakke2018-03-04
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/ceph-disable-cpu-optimizations.patch: Adjust to upstream changes. * gnu/packages/patches/ceph-disable-unittest-throttle.patch: Delete file. * gnu/packages/patches/ceph-rocksdb-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/storage.scm (ceph): Update to 12.2.4. [source](patches): Adjust. [arguments]: Add "-DWITH_BABELTRACE=OFF" in #:configure-flags. Build with CMAKE-3.11. Adjust file substitutions. Wrap 'ceph' executable. [native-inputs]: Add GPERF. [inputs]: Replace BOOST with BOOST-1.66. Add PYTHON2-PRETTYTABLE.
* | | | | gnu: antlr3-3.3: Fix java8 issue.Gábor Boskovits2018-03-04
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/java.scm (antlr3-3.3)[source]: Add patch. * gnu/packages/patches/antlr3-3_3-fix-java8-compilation.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* | | | | gnu: antlr3-3.1: Fix java8 issue.Gábor Boskovits2018-03-04
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/java.scm (antlr3-3.1)[source]: Add patch. * gnu/packages/patches/antlr3-3_1-fix-java8-compilation.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* | | | | gnu: icecat: Update to 52.6.0-gnu1.Mark H Weaver2018-03-02
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/gnuzilla.scm (icecat): Update to 52.6.0-gnu1. [source]: Remove patches that are no longer needed. * gnu/packages/patches/icecat-bug-1348660-pt5.patch, gnu/packages/patches/icecat-bug-1414945.patch, gnu/packages/patches/icecat-bug-1415133.patch, gnu/packages/patches/icecat-bug-1424373-pt2.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
* | | | | gnu: php: Fix test failure.Julien Lepiller2018-03-01
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/php.scm (php)[inputs]: Use gd-for-php. (gd-for-php): New private variable. * gnu/packages/patches/gd-CVE-2018-5711.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* | | | | gnu: Graft glibc to allow execution on Linux 2.6.32.Ricardo Wurmus2018-03-01
| |_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/glibc-allow-kernel-2.6.32.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/base.scm (glibc/linux)[replacement]: New field. (glibc-2.26-patched): New variable.
* | | | gnu: dovecot: Update to 2.3.0.1 [fixes CVE-2017-14461].Tobias Geerinckx-Rice2018-02-28
| | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/mail.scm (dovecot): Update to 2.3.0.1. [source]: Remove upstreamed patch. * gnu/packages/patches/dovecot-CVE-2017-15132.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* | | | gnu: guile-static-stripped: Add 'finit_module' wrapper.Ludovic Courtès2018-02-28
| | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/guile-linux-syscalls.patch: Add 'load-linux-module/fd' procedure.
* | | | gnu: wavpack: Fix CVE-2018-6767.Marius Bakke2018-02-28
| | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/wavpack-CVE-2018-6767.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/audio.scm (wavpack)[source](patches): Add it.
* | | | gnu: python-mox3: Update to 0.24.0.Marius Bakke2018-02-28
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/openstack.scm (python-mox3): Update to 0.24.0. [source](patches): New field. [arguments]: Remove. [native-inputs]: Add PYTHON-OPENSTACKDOCSTHEME and PYTHON-SUBUNIT. Replace PYTHON-SPHINX with PYTHON-SPHINX-1.6. Move PYTHON-PBR and PYTHON-FIXTURES ... [propagated-inputs]: ... here. New field. [description]: Don't mention explicit Python versions. * gnu/packages/patches/python-mox3-python3.6-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
* | | | gnu: dblatex: Update to 0.3.10.Tobias Geerinckx-Rice2018-02-28
| | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/docbook.scm (dblatex): Update to 0.3.10. [source]: Remove patch. * gnu/packages/patches/dblatex-remove-multirow.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.