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* gnu: guile-aiscm-next: Deprecate in favor of guile-aiscm.Ricardo Wurmus2022-09-20
| | | | | * gnu/packages/machine-learning.scm (guile-aiscm-next): Define as a deprecated name for guile-aiscm.
* gnu: guile-aiscm: Update to 0.24.2.Ricardo Wurmus2022-09-20
| | | | | | | | | | | * gnu/packages/machine-learning.scm (guile-aiscm): Update to 0.24.2. [arguments]: Add configure flags for OpenCV modules; add build phase 'find-clearsilver; adjust phase 'use-llvm-config; add phase 'disable-broken-test. [inputs]: Add clearsilver, libgc, opencv, and tensorflow; replace ffmpeg with ffmpeg-4. [native-inputs]: Add protobuf-c; replace clang-13 and llvm-13 with clang-11 and llvm-11, respectively.
* gnu: liblantern: Update to 0.8.1.Ricardo Wurmus2022-09-20
| | | | * gnu/packages/machine-learning.scm (liblantern): Update to 0.8.1.
* gnu: liblantern: Do not hardcode Python version.Ricardo Wurmus2022-09-20
| | | | | * gnu/packages/machine-learning.scm (liblantern)[arguments]: Do not hardcode Python version.
* gnu: python-scikit-learn: Update to 1.1.2.Marius Bakke2022-09-14
| | | | * gnu/packages/machine-learning.scm (python-scikit-learn): Update to 1.1.2.
* gnu: Remove ‘open source’ from package descriptions.Tobias Geerinckx-Rice2022-08-14
| | | | | | | | | | | | | | | | | | | | | | | Also do some (trivial) editing where appropriate. * gnu/packages/bioconductor.scm (r-anaquin, r-rcppnumerical) [description]: Remove superfluous ‘open source’. * gnu/packages/debian.scm (apt-mirror)[description]: Likewise. Add @acronym{}. Drop obscure Ubuntu for famous Trisquel. Reorder. * gnu/packages/documentation.scm (scrollkeeper)[description]: Remove superfluous ‘open systems’. Keep ‘Open Source’ in standard name. * gnu/packages/engineering.scm (freecad, cura-engine)[description]: Remove superfluous ‘open source’ and excessive puffery. * gnu/packages/firmware.scm (make-opensbi-package) [synopsis]: Remove ‘Open Source’. Use @acronym{}. [description]: Fix first sentence to follow guidelines. Use @acronym{}. * gnu/packages/game-development.scm (ioquake3, recastnavigation): [description]: Remove ‘open source’. * gnu/packages/graphics.scm (skia)[description]: Likewise. * gnu/packages/lisp-xyz.scm (sbcl-s-sysdeps)[description]: Likewise. * gnu/packages/machine-learning.scm (onnx)[description]: Likewise. Use @acronym{}. * gnu/packages/ocaml.scm (ocaml-cudf)[description]: Likewise.
* gnu: python-umap-learn: Disable unreliable test.Ricardo Wurmus2022-08-01
| | | | | * gnu/packages/machine-learning.scm (python-umap-learn)[arguments]: Disable test_densmap_trustworthiness_on_iris_supervised.
* gnu: python-umap-learn: Set NUMBA_CACHE_DIR.Ricardo Wurmus2022-08-01
| | | | | * gnu/packages/machine-learning.scm (python-umap-learn)[arguments]: Add phase to set NUMBA_CACHE_DIR.
* gnu: Add python-pyro-ppl.Ricardo Wurmus2022-07-09
| | | | * gnu/packages/machine-learning.scm (python-pyro-ppl): New variable.
* gnu: Add python-visdom.Ricardo Wurmus2022-07-09
| | | | * gnu/packages/machine-learning.scm (python-visdom): New variable.
* gnu: Add python-lap.Ricardo Wurmus2022-07-09
| | | | * gnu/packages/machine-learning.scm (python-lap): New variable.
* gnu: Add python-pyro-api.Ricardo Wurmus2022-07-08
| | | | * gnu/packages/machine-learning.scm (python-pyro-api): New variable.
* gnu: Add python-torchfile.Ricardo Wurmus2022-07-08
| | | | * gnu/packages/machine-learning.scm (python-torchfile): New variable.
* gnu: python-torchvision: Update to 0.13.0.Ricardo Wurmus2022-07-07
| | | | * gnu/packages/machine-learning.scm (python-torchvision): Update to 0.13.0.
* gnu: python-pytorch: Update to 1.12.0.Ricardo Wurmus2022-07-07
| | | | | * gnu/packages/machine-learning.scm (python-pytorch): Update to 1.12.0. [arguments]: Explicitly request the use of our pybind11 package.
* gnu: xnnpack: Update to 0.0-2.ae108ef.Ricardo Wurmus2022-07-07
| | | | | * gnu/packages/machine-learning.scm (xnnpack): Update to 0.0-2.ae108ef. * gnu/packages/patches/xnnpack-system-libraries.patch: Update.
* gnu: python-pytorch-for-r-torch: Explicitly keep at 1.11.0.Ricardo Wurmus2022-07-07
| | | | | * gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): Separate from python-pytorch by overriding version and source.
* gnu: Add python-torchvision.Ricardo Wurmus2022-07-06
| | | | * gnu/packages/machine-learning.scm (python-torchvision): New variable.
* gnu: liblantern: Update to 0.8.0.Ludovic Courtès2022-07-05
| | | | * gnu/packages/machine-learning.scm (liblantern): Update to 0.8.0.
* gnu: python-pytorch: Update to 1.11.0.Ludovic Courtès2022-07-05
| | | | | | | | | * gnu/packages/machine-learning.scm (python-pytorch): Update to 1.11.0. [source](snippet): Remove now unnecessary "caffe2/onnx/backend.cc" substitution. [arguments]: Add 'remove-caffe2-onnx-scripts' phase. * gnu/packages/patches/python-pytorch-runpath.patch, gnu/packages/patches/python-pytorch-system-libraries.patch: Update.
* gnu: onnx: Update to 1.12.0.Ludovic Courtès2022-07-05
| | | | * gnu/packages/machine-learning.scm (onnx): Update to 1.12.0.
* Merge remote-tracking branch 'origin/master' into stagingEfraim Flashner2022-06-01
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| * gnu: Remove python2-autograd.Maxim Cournoyer2022-05-31
| | | | | | | | * gnu/packages/machine-learning.scm (python2-autograd): Delete variable.
| * gnu: Remove python2-fastlmm.Maxim Cournoyer2022-05-31
| | | | | | | | * gnu/packages/machine-learning.scm (python2-fastlmm): Delete variable.
| * gnu: Remove python2-scikit-learn.Maxim Cournoyer2022-05-31
| | | | | | | | | | * gnu/packages/machine-learning.scm (python2-scikit-learn): Delete variable. (python-scikit-learn)[properties]: Remove the python2-variant property.
* | Merge branch 'master' into stagingEfraim Flashner2022-05-16
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| * gnu: python-umap-learn: Update to 0.5.3.Maxim Cournoyer2022-05-12
| | | | | | | | | | | | | | | | | | | | * gnu/packages/machine-learning.scm (python-umap-learn): Update to 0.5.3. [source]: Use git. [arguments]: New field. [native-inputs]: Delete python-joblib and python-nose. Add python-pytest. [propagated-inputs]: Add python-pynndescent and python-tqdm. [synopsis]: Fix indentation. [description]: Fix typo and re-indent.
| * gnu: python-pynndescent: Update to 0.5.6.Maxim Cournoyer2022-05-12
| | | | | | | | | | | | * gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.6. [phases]{check}: Skip the test_weighted_minkowski test. [native-inputs, propagated-inputs]: Re-indent.
| * gnu: python-scikit-learn: Parallelize build and test suite.Maxim Cournoyer2022-05-12
| | | | | | | | | | | | | | | | * gnu/packages/machine-learning.scm (python-scikit-learn) [phases]{configure}: New phase. {build-ext}: Add '-j' option. {check}: Add '-n' option. [native-inputs]: Add python-pytest-xdist.
* | gnu: openfst: Update to 1.8.2, enable ngram extensionAurora2022-05-15
| | | | | | | | | | | | | | | | | | | | This extension is required by some programs that depend on openfst that aren't yet packaged. * gnu/packages/machine-learning.scm (openfst): Update to 1.8.2. [arguments]: New field. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* | gnu: openfst-1.7.3: Enable ngram-fst extension & C++14 buildAurora2022-05-15
| | | | | | | | | | | | | | | | | | | | | | | | | | The extension doesn't build in old versions of openfst such as 1.7.3 without manually setting CXXFLAGS. This package definition, including this workaround to build extensions successfully, will need to be removed once kaldi is fixed upstream and can be used with up-to-date versions of openfst. * gnu/packages/machine-learning.scm (openfst-1.7.3)[arguments]: New field. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* | gnu: kaldi: Update to dd107fd, bypass testsAurora2022-05-15
| | | | | | | | | | | | | | | | | | | | | | | | | | Either kaldi's tests are broken or openblas has reintroduced a bug: - https://github.com/kaldi-asr/kaldi/pull/4421 More testing & fixes required upstream to re-enable the tests later. For now they'll just have to be ignored. * gnu/packages/machine-learning.scm (kaldi): Update to dd107fd. [arguments]: In 'configure' phase, modify "matrix/Makefile". Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* | gnu: openfst: Add 1.7.3 for kaldiAurora2022-05-15
|/ | | | | | | | | | | | | | | Kaldi is currently broken with openfst versions newer than 1.7.3 as it changed some of its function signatures. Once Kaldi is patched/fixed, this should be removed. Reference Issues: - https://github.com/kaldi-asr/kaldi/issues/4131 - https://github.com/kaldi-asr/kaldi/issues/4393 * gnu/packages/machine-learning.scm (openfst-1.7.3): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: python-hmmlearn: Remove cythonized file.Efraim Flashner2022-04-15
| | | | | * gnu/packages/machine-learning.scm (python-hmmlearn)[source]: Add snippet to remove cythonized file.
* gnu: liblantern: Update to 0.7.2.Ricardo Wurmus2022-03-15
| | | | * gnu/packages/machine-learning.scm (liblantern): Update to 0.7.2.
* gnu: liblantern: Update to 0.7.0.Ricardo Wurmus2022-03-15
| | | | * gnu/packages/machine-learning.scm (liblantern): Update to 0.7.0.
* gnu: python-pytorch-for-r-torch: Reuse python-pytorch.Ricardo Wurmus2022-03-15
| | | | | * gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): Use definition on python-pytorch, thereby updating to 1.10.2.
* gnu: Add liblantern.Ricardo Wurmus2022-02-11
| | | | * gnu/packages/machine-learning.scm (liblantern): New variable.
* gnu: Add python-pytorch-for-r-torch.Ricardo Wurmus2022-02-11
| | | | | | * gnu/packages/patches/python-pytorch-1.9.0-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): New variable.
* gnu: python-pytorch: Update to 1.10.2.Ricardo Wurmus2022-02-11
| | | | * gnu/packages/machine-learning.scm (python-pytorch): Update to 1.10.2.
* gnu: xgboost: Update to 1.5.2.Vinicius Monego2022-01-24
| | | | | | | | | * gnu/packages/machine-learning.scm (xgboost, python-xgboost): Update to 1.5.2. (python-xgboost)[arguments]: Enable previously failing test. * gnu/packages/patches/xgboost-use-system-dmlc-core.patch: Update patch. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: python-scikit-learn: Update to 1.0.2.Marius Bakke2022-01-19
| | | | * gnu/packages/machine-learning.scm (python-scikit-learn): Update to 1.0.2.
* Merge branch 'version-1.4.0'Maxim Cournoyer2022-01-17
|\ | | | | | | | | | | | | With resolved conflicts in: gnu/packages/gnome.scm gnu/packages/openstack.scm gnu/packages/python-xyz.scm
| * gnu: python-scikit-learn: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | | | | | | | | * gnu/packages/machine-learning.scm (python-scikit-learn)[arguments] <#:phases>: Remove 'make-files-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* | gnu: python-opentsne: Update to 0.6.1.Vinicius Monego2022-01-14
| | | | | | | | | | | | | | * gnu/packages/machine-learning.scm (python-opentsne): Update to 0.6.1. [source]<file-name>: Use git-file-name. [arguments]<#:phases>: Don't return #t. Add 'skip-test phase after 'unpack to skip a failing test.
* | gnu: python-pynndescent: Update to 0.5.5.Vinicius Monego2022-01-14
| | | | | | | | | | | | | | | | * gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.5. [arguments]<#:phases>: Override 'check phase. [native-inputs]: Remove python-nose. Add python-pytest. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
* | gnu: python-scikit-rebate: Update to 0.62.Marius Bakke2022-01-11
|/ | | | | | * gnu/packages/machine-learning.scm (python-scikit-rebate): Update to 0.62. [arguments]: Disable tests. [native-inputs]: Remove.
* gnu: Add guile-aiscm-next.Ricardo Wurmus2021-12-28
| | | | * gnu/packages/machine-learning.scm (guile-aiscm-next): New variable.
* gnu: guile-aiscm: Remove opencv and tensorflow.Ricardo Wurmus2021-12-28
| | | | | * gnu/packages/machine-learning.scm (guile-aiscm)[inputs]: Remove opencv and tensorflow.
* gnu: guile-aiscm: Remove timestamp from documentation.Ricardo Wurmus2021-12-28
| | | | | * gnu/packages/machine-learning.scm (guile-aiscm)[arguments]: Add phase 'build-reproducibly.
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