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* gnu: Add python-ripser.Troy Figiel2024-01-09
| | | | | | | * gnu/packages/machine-learning.scm (python-ripser): New variable. Change-Id: I21b42e555a5017e68cf43a6eaa19d991db36723d Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
* gnu: Add python-persim.Troy Figiel2024-01-09
| | | | | | | * gnu/packages/machine-learning.scm (python-persim): New variable. Change-Id: I914071a90b4555d7d1218ce83337d49298effb01 Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
* gnu: Add python-hopcroftkarp.Troy Figiel2024-01-09
| | | | | | | * gnu/packages/machine-learning.scm (python-hopcroftkarp): New variable. Change-Id: I444f0371526d7a69d31363c228d5f7818bcf60dd Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
* gnu: onnx: Relax requirement on python-protobuf.Ricardo Wurmus2024-01-05
| | | | | | | | | * gnu/packages/machine-learning.scm (onnx)[arguments]: Add phase 'relax-requirements. (onnx-for-torch2)[arguments]: Delete 'relax-requirements phase. (onnx-optimizer)[arguments]: Same. Change-Id: If3bde363d06f16f2b82e175076041441d29e8d6e
* gnu: liblantern: Update to 0.11.0-1.4d83bd0.Ricardo Wurmus2024-01-01
| | | | | | * gnu/packages/machine-learning.scm (liblantern): Update to 0.11.0-1.4d83bd0. Change-Id: I04ac3d64df8ec3b4ba628886640020a24361f4e3
* gnu: python-pytorch-for-r-torch: Update to 2.0.1.Ricardo Wurmus2024-01-01
| | | | | | | | * gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): Update to 2.0.1. * gnu/packages/patches/python-pytorch2-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Change-Id: I97551d543e50f6e511aa0529c097d156cf3f96de
* gnu: Add onnx-optimizer-for-torch2.Ricardo Wurmus2024-01-01
| | | | | | * gnu/packages/machine-learning.scm (onnx-optimizer-for-torch2): New variable. Change-Id: Icf48cba3f0a30f171b6f01cd033dd135a078ba1a
* gnu: Add onnx-for-torch2.Ricardo Wurmus2024-01-01
| | | | | | | | * gnu/packages/machine-learning.scm (onnx-for-torch2): New variable. * gnu/packages/patches/onnx-1.13.1-use-system-googletest.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Change-Id: I8a46b9a8096a33bcf949bc4f5d497e22902ab301
* gnu: Add xnnpack-for-torch2.Ricardo Wurmus2024-01-01
| | | | | | | | * gnu/packages/machine-learning.scm (xnnpack-for-torch2): New variable. * gnu/packages/patches/xnnpack-for-torch2-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Change-Id: I1c35f5fbd064fcc6732b924d7cafaa1a7d03ce04
* gnu: tensorflow-lite: Update to 2.13.1Andy Tai2023-12-22
| | | | | | | * gnu/packages/machine-learning.scm (tensorflow-lite): Update to 2.13.1 Change-Id: Icc7ff237660006e2320df02b353ccab5dac7b7d2 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: python-autograd: Update to 1.5.Felix Gruber2023-12-06
| | | | | | | | | * gnu/packages/machine-learning.scm (python-autograd): Update to 1.5. [build-system]: Use pyproject-build-system. [arguments]: Remove custom 'check phase. Change-Id: Ic76510b94d268d5dba6e9b0e057fcfca125e424f Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add python-scikit-learn-extra.Timothee Mathieu2023-12-02
| | | | | | | | | | | * gnu/packages/machine-learning.scm (python-scikit-learn-extra): New variable. Change-Id: I50992ceaa76608f3345df6d74a5d9e4aa7c485a5 gnu/packages/machine-learning.scm | 41 +++++++++++++++++++++++++++++++ 1 file changed, 41 insertions(+) Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: python-imbalanced-learn: Update to 0.11.0.Troy Figiel2023-11-20
| | | | | | | | | | | | * gnu/packages/machine-learning.scm (python-imbalanced-learn): Update to 0.11.0. [arguments]<#:test-flags>: Move broken tests from "unbreak-tests" phase to here. <#:phases>: Add back some deleted python-keras and tensorflow tests. [native-inputs]: Add python-keras, python-numpydoc and tensorflow. Change-Id: Ibc2827e27ee23e0ffb491cb791bba4d1a3f1109d Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
* gnu: python-imbalanced-learn: Reformat with guix style.Arun Isaac2023-11-20
| | | | | | | * gnu/packages/machine-learning.scm (python-imbalanced-learn): Reformat with guix style. Change-Id: Ifbdcb8dc43433bd6b4777527d5f8f94d5e1aa168
* gnu: python-deepxde: Update to 1.10.0.Vinicius Monego2023-11-03
| | | | | | * gnu/packages/machine-learning.scm (python-deepxde): Update to 1.10.0. Change-Id: Ibc37f9e7df45c49f590beb1dda87236e853b88c1
* gnu: python-opentsne: Update to 1.0.0.Vinicius Monego2023-11-03
| | | | * gnu/packages/machine-learning.scm (python-opentsne): Update to 1.0.0.
* gnu: Add python-ml-collections.Ricardo Wurmus2023-10-30
| | | | | | * gnu/packages/machine-learning.scm (python-ml-collections): New variable. Change-Id: I9299fe4221f13d979266fccc7b9cdd96a8d6e678
* gnu: Add python-funsor.Ricardo Wurmus2023-10-25
| | | | | | * gnu/packages/machine-learning.scm (python-funsor): New variable. Change-Id: Ibd4b993e4d55a6fdda70fe2b6cf4f665730b6739
* gnu: python-tslearn: Update to 0.6.2.Sharlatan Hellseher2023-09-27
| | | | | | * gnu/packages/machine-learning.scm (python-tslearn): Update to 0.6.2. Signed-off-by: Christopher Baines <mail@cbaines.net>
* gnu: tensorflow-lite: Update to 2.13.0.Andy Tai2023-09-18
| | | | | | | | | | | * gnu/packages/machine-learning.scm: (tensorflow-lite): Update to 2.13.0 [inputs]: Add gemmlowp [native-inputs]: Remove gemmlowp-src * gnu/packages/patches/tensorflow-lite-unbundle.patch: New file * gnu/local.mk (dist_patch_DATA): Add it. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add python-gpytorch.Vinicius Monego2023-09-16
| | | | * gnu/packages/machine-learning.scm (python-gpytorch): New variable.
* gnu: Add python-linear-operator.Vinicius Monego2023-09-16
| | | | * gnu/packages/machine-learning.scm (python-linear-operator): New variable.
* gnu: Add python-jaxtyping.Vinicius Monego2023-09-16
| | | | * gnu/packages/machine-learning.scm (python-jaxtyping): New variable.
* gnu: tensorflow-lite: Update to 2.12.1.Andy Tai2023-09-08
| | | | | | | | | | | | | | | | | | | | * gnu/packages/algebra.scm (eigen-for-tensorflow-lite): Remove variable. * gnu/packages/machine-learning.scm (tensorflow-lite): Update to 2.12.1 [arguments]<configure-flags>: Turn on GPU and RUY use; Use cmake to find packages already in Guix as dependencies for absl-cpp, eigen, flatbuffer, neon2ssl, cpuinfo, ruy. [arguments]<phases>: Remove operations setting up absl-cpp, eigen, ruy, and neon2ssl as native inouts as now we use Guix's packages of these as dependencies. Do default build phase. Add steps to install C shared library and benchmark_model tool. [inputs]: Add cpuinfo, eigen, fp16, mesa-header, opencl, pthreadpool, ruy, vulkan and xnnpack as explicit inputs. [native-inputs]: Remove local setup of neon2ssl and ruy as we now use Guix's packages of these as explicit dependencies. * gnu/packages/serialization.scm (flatbuffers-next-shared): New variable, flatbuffers-next built with -fPIC as needed by tensorflow-lite. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: Add python-fasttext.Ricardo Wurmus2023-09-07
| | | | * gnu/packages/machine-learning.scm (python-fasttext): New variable.
* gnu: Add fasttext.Ricardo Wurmus2023-09-07
| | | | * gnu/packages/machine-learning.scm (fasttext): New variable.
* gnu: python-deepxde: Update to 1.9.3.Vinicius Monego2023-09-02
| | | | * gnu/packages/machine-learning.scm (python-deepxde): Update to 1.9.3.
* gnu: gemmlowp: Update to 0.1-1.08e4bb3.Andy Tai2023-08-27
| | | | | | * gnu/packages/machine-learning.scm (gemmlowp): Update to 0.1-1.08e4bb3. Signed-off-by: Christopher Baines <mail@cbaines.net>
* gnu: llama-cpp: Update to 0.0.0-0.f31b539.Nicolas Graves2023-08-15
| | | | | | | | | * gnu/packages/machine-learning.scm (llama-cpp): Update to 0.0.0-0.f31b539. [#:phases](install-python-scripts): Adapt python scripts. (install): Remove deleted quantize script installation. Co-authored-by: Andy Tai <atai@atai.org> Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: python-pyro-ppl: Update to 1.8.6.Vinicius Monego2023-08-12
| | | | * gnu/packages/machine-learning.scm (python-pyro-ppl): Update to 1.8.6.
* gnu: Add python-deepxde.Vinicius Monego2023-07-29
| | | | * gnu/packages/machine-learning.scm (python-deepxde): New variable.
* gnu: rxcpp: Update to 4.1.1.Tobias Geerinckx-Rice2023-07-16
| | | | * gnu/packages/machine-learning.scm (rxcpp): Update to 4.1.1.
* gnu: Add python-captum.Ricardo Wurmus2023-07-10
| | | | * gnu/packages/machine-learning.scm (python-captum): New variable.
* gnu: Add python-tslearn.Navid Afkhami2023-07-07
| | | | | | * gnu/packages/machine-learning.scm (python-tslearn): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>.
* gnu: python-threadpoolctl: Update to 3.1.0.Ricardo Wurmus2023-06-29
| | | | | | | * gnu/packages/machine-learning.scm (python-threadpoolctl): Update to 3.1.0. [build-system]: Use pyproject-build-system. [arguments]: Remove custom 'check phase. [native-inputs]: Add python-flit-core.
* gnu: oneapi-dnnl: Fix building on riscv64-linux.Z5722023-06-25
| | | | | | | | | | 'CMake Error at src/cpu/rv64/CMakeLists.txt:36 (message): Only sequential runtime is now supported for a RISC-V CPU'. * gnu/packages/machine-learning.scm (oneapi-dnnl)[arguments]: Adjust configure-flags when building for riscv64-linux to fix build. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: python-keras: Update to 2.3.1.Ricardo Wurmus2023-06-20
| | | | | | | | | | | | * gnu/packages/patches/python-keras-integration-test.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/machine-learning.scm (python-keras): Update to 2.3.1. [source]: Remove patch; update snippet. [arguments]: Add build phase 'tf-compatibility; add phase 'hdf5-compatibility; rename phase 'remove-tests-for-unavailable-features to 'delete-unavailable-backends; update 'check phase to disable tests that cannot be repaired or are flaky. [native-inputs]: Add python-flaky, python-markdown, and python-pyux.
* gnu: tensorflow: Patch one more instance of "collections".Ricardo Wurmus2023-06-20
| | | | | | * gnu/packages/machine-learning.scm (tensorflow)[arguments]: Add one more patch of "collections" to "collections.abc" to the 'python3.10-compatibility phase.
* gnu: tensorflow: Drop trailing #T from build phase.Ricardo Wurmus2023-06-20
| | | | | * gnu/packages/machine-learning.scm (tensorflow)[arguments]: Remove #T from 'set-source-file-times-to-1980 phase.
* gnu: tensorflow: Patch for numpy >= 1.23.Ricardo Wurmus2023-06-20
| | | | | * gnu/packages/machine-learning.scm (tensorflow)[arguments]: Remove np.asscalar in 'python3.10-compatibility phase.
* gnu: tensorflow: Drop package labels from propagated-inputs.Ricardo Wurmus2023-06-20
| | | | * gnu/packages/machine-learning.scm (tensorflow)[propagated-inputs]: Drop labels.
* gnu: python-keras: Fix building with newer python.Efraim Flashner2023-06-14
| | | | | * gnu/packages/machine-learning.scm (python-keras)[source]: Add snippet to adjust for newer versions of python.
* svn-download: Do not expand keywords.Timothy Sample2023-06-11
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Subversion keyword expansion is potentially non-reproducible as some of them expand time strings relative to the local time zone: https://issues.guix.gnu.org/43442#18 In practice this is not a problem in Guix since Subversion checkouts happen in an isolated environment using the "default timezone" (UTC). However, Software Heritage disables keyword expansion for this very reason. By following suit, we make sure content can be retrieved from there. * guix/build/svn.scm (svn-fecth): Pass "--ignore-keywords" to Subversion. * guix/build-system/texlive.scm (%texlive-date): New variable. * gnu/packages/java.scm (java-geronimo-xbean-reflect) (java-geronimo-genesis-2.1): Update the source hash. * gnu/packages/machine-learning.scm (ghmm): Likewise. * gnu/packages/video.scm (libsmpeg, libsmpeg-with-sdl1): Likewise. * gnu/packages/tex.scm (texlive-bin): Update the hash of the "texlive-scripts" input, and a add a new phase that imitates Subversion keyword expansion for scripts that need it. (texlive-latex-base): Update the hash of the "texlive-luatexconfig" native input. (texlive-hyphen-base, texlive-dvipdfmx, texlive-dvips, texlive-cm) (texlive-tex-plain, texlive-kpathsea, texlive-latexconfig) (texlive-tetex, texlive-pdftex, texlive-xetex): Update the source hash. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add python-sacrebleu.Ricardo Wurmus2023-06-09
| | | | * gnu/packages/machine-learning.scm (python-sacrebleu): New variable.
* gnu: Add python-spacy.Ricardo Wurmus2023-06-08
| | | | * gnu/packages/machine-learning.scm (python-spacy): New variable.
* gnu: Add python-thinc.Ricardo Wurmus2023-06-08
| | | | * gnu/packages/machine-learning.scm (python-thinc): New variable.
* gnu: Add python-spacy-loggers.Ricardo Wurmus2023-06-08
| | | | * gnu/packages/machine-learning.scm (python-spacy-loggers): New variable.
* gnu: Add python-spacy-legacy.Ricardo Wurmus2023-06-08
| | | | * gnu/packages/machine-learning.scm (python-spacy-legacy): New variable.
* gnu: Add r-rcppml/devel.Ricardo Wurmus2023-06-02
| | | | * gnu/packages/machine-learning.scm (r-rcppml/devel): New variable.
* gnu: Add python-tensorly.Navid Afkhami2023-05-25
| | | | | | * gnu/packages/machine-learning.scm (python-tensorly): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
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