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* gnu: r-matrixgenerics: Update to 1.12.2.•••* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.12.2. Ricardo Wurmus2023-07-12
* gnu: r-systempiper: Update to 2.6.3.•••* gnu/packages/bioconductor.scm (r-systempiper): Update to 2.6.3. Ricardo Wurmus2023-07-12
* gnu: r-summarizedexperiment: Update to 1.30.2.•••* gnu/packages/bioconductor.scm (r-summarizedexperiment): Update to 1.30.2. Ricardo Wurmus2023-07-12
* gnu: r-maaslin2: Update to 1.14.1.•••* gnu/packages/bioconductor.scm (r-maaslin2): Update to 1.14.1. [propagated-inputs]: Remove r-lpsymphony; add r-tibble. Ricardo Wurmus2023-07-12
* gnu: r-limma: Update to 3.56.2.•••* gnu/packages/bioconductor.scm (r-limma): Update to 3.56.2. Ricardo Wurmus2023-07-12
* gnu: r-lfa: Update to 2.0.11.•••* gnu/packages/bioconductor.scm (r-lfa): Update to 2.0.11. [propagated-inputs]: Add r-rspectra. Ricardo Wurmus2023-07-12
* gnu: r-genomicfeatures: Update to 1.52.1.•••* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.52.1. Ricardo Wurmus2023-07-12
* gnu: r-deseq2: Update to 1.40.2.•••* gnu/packages/bioconductor.scm (r-deseq2): Update to 1.40.2. Ricardo Wurmus2023-07-12
* gnu: r-biomart: Update to 2.56.1.•••* gnu/packages/bioconductor.scm (r-biomart): Update to 2.56.1. Ricardo Wurmus2023-07-12
* gnu: r-annotationforge: Update to 1.42.2.•••* gnu/packages/bioconductor.scm (r-annotationforge): Update to 1.42.2. Ricardo Wurmus2023-07-12
* gnu: r-genomeinfodb: Update to 1.36.1.•••* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.36.1. Ricardo Wurmus2023-07-12
* gnu: r-annotationdbi: Update to 1.62.2.•••* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.62.2. Ricardo Wurmus2023-07-12
* gnu: r-affy: Update to 1.78.1.•••* gnu/packages/bioconductor.scm (r-affy): Update to 1.78.1. Ricardo Wurmus2023-07-12
* gnu: r-isoformswitchanalyzer: Update to 2.0.1.•••* gnu/packages/bioconductor.scm (r-isoformswitchanalyzer): Update to 2.0.1. [propagated-inputs]: Remove r-drimseq; add r-biocparallel, r-pfamanalyzer, r-s4vectors, r-saturn, r-summarizedexperiment, r-sva, and r-tidyr. Ricardo Wurmus2023-07-12
* gnu: r-iranges: Update to 2.34.1.•••* gnu/packages/bioconductor.scm (r-iranges): Update to 2.34.1. Ricardo Wurmus2023-07-12
* gnu: r-delayedarray: Update to 0.26.6.•••* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.26.6. Ricardo Wurmus2023-07-12
* gnu: r-bambu: Update to 3.2.5.•••* gnu/packages/bioconductor.scm (r-bambu): Update to 3.2.5. Ricardo Wurmus2023-07-12
* gnu: r-alevinqc: Update to 1.16.1.•••* gnu/packages/bioconductor.scm (r-alevinqc): Update to 1.16.1. Ricardo Wurmus2023-07-12
* gnu: r-ancombc: Update to 2.2.1.•••* gnu/packages/bioconductor.scm (r-ancombc): Update to 2.2.1. [propagated-inputs]: Remove r-dplyr, r-emmeans, r-magrittr, r-rlang, r-rngtools, r-tibble, and r-tidyr; add r-gtools, r-matrix, and r-multcomp. Ricardo Wurmus2023-07-12
* gnu: r-gdsfmt: Update to 1.36.1.•••* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.36.1. [properties]: Tell updater to leave the extra inputs be. Ricardo Wurmus2023-07-12
* gnu: Add r-saturn.•••* gnu/packages/bioconductor.scm (r-saturn): New variable. Ricardo Wurmus2023-07-12
* gnu: Add r-pfamanalyzer.•••* gnu/packages/bioconductor.scm (r-pfamanalyzer): New variable. Ricardo Wurmus2023-07-12
* gnu: r-mzr: Update to 2.34.1.•••* gnu/packages/bioconductor.scm (r-mzr): Update to 2.34.1. [properties]: Tell updater to not remove the "boost" input. Ricardo Wurmus2023-07-12
* gnu: r-ggpicrust2: Update to 1.7.1.•••* gnu/packages/bioconductor.scm (r-ggpicrust2): Update to 1.7.1. [propagated-inputs]: Remove r-phyloseq; add r-ggh4x. Ricardo Wurmus2023-07-12
* gnu: r-scistreer: Update to 1.2.0.•••* gnu/packages/bioconductor.scm (r-scistreer): Update to 1.2.0. Ricardo Wurmus2023-07-12
* gnu: r-numbat: Update to 1.3.2-1.•••* gnu/packages/bioconductor.scm (r-numbat): Update to 1.3.2-1. Ricardo Wurmus2023-07-12
* gnu: r-biomartr: Update to 1.0.4.•••* gnu/packages/bioconductor.scm (r-biomartr): Update to 1.0.4. Ricardo Wurmus2023-07-12
* gnu: Add r-cellid.•••* gnu/packages/bioconductor.scm (r-cellid): New variable. Navid Afkhami2023-07-03
* gnu: r-ggpicrust2: Update to 1.7.0.•••* gnu/packages/bioconductor.scm (r-ggpicrust2): Update to 1.7.0. [propagated-inputs]: Add r-circlize. [native-inputs]: Add r-knitr. Ricardo Wurmus2023-06-03
* gnu: r-tcgabiolinks: Update to 2.28.2.•••* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.28.2. Ricardo Wurmus2023-06-02
* gnu: r-biocthis: Update to 1.10.1.•••* gnu/packages/bioconductor.scm (r-biocthis): Update to 1.10.1. Ricardo Wurmus2023-06-02
* gnu: r-basilisk-utils: Update to 1.12.1.•••* gnu/packages/bioconductor.scm (r-basilisk-utils): Update to 1.12.1. Ricardo Wurmus2023-06-02
* gnu: r-megadepth: Update to 1.10.0.•••* gnu/packages/bioconductor.scm (r-megadepth): Update to 1.10.0. Ricardo Wurmus2023-06-02
* gnu: r-s4arrays: Update to 1.0.4.•••* gnu/packages/bioconductor.scm (r-s4arrays): Update to 1.0.4. Ricardo Wurmus2023-06-02
* gnu: r-biocviews: Update to 1.68.1.•••* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.68.1. Ricardo Wurmus2023-06-02
* gnu: r-rsubread: Update to 2.14.2.•••* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.14.2. Ricardo Wurmus2023-06-02
* gnu: r-treeio: Update to 1.24.1.•••* gnu/packages/bioconductor.scm (r-treeio): Update to 1.24.1. Ricardo Wurmus2023-06-02
* gnu: r-apeglm: Update to 1.22.1.•••* gnu/packages/bioconductor.scm (r-apeglm): Update to 1.22.1. Ricardo Wurmus2023-06-02
* gnu: r-zellkonverter: Update to 1.10.1.•••* gnu/packages/bioconductor.scm (r-zellkonverter): Update to 1.10.1. Ricardo Wurmus2023-06-02
* gnu: r-scmap: Update to 1.22.3.•••* gnu/packages/bioconductor.scm (r-scmap): Update to 1.22.3. Ricardo Wurmus2023-06-02
* gnu: r-limma: Update to 3.56.1.•••* gnu/packages/bioconductor.scm (r-limma): Update to 3.56.1. Ricardo Wurmus2023-06-02
* gnu: r-edger: Update to 3.42.4.•••* gnu/packages/bioconductor.scm (r-edger): Update to 3.42.4. Ricardo Wurmus2023-06-02
* gnu: r-biostrings: Update to 2.68.1.•••* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.68.1. Ricardo Wurmus2023-06-02
* gnu: r-biocparallel: Update to 1.34.2.•••* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.34.2. Ricardo Wurmus2023-06-02
* gnu: r-densvis: Update to 1.10.2.•••* gnu/packages/bioconductor.scm (r-densvis): Update to 1.10.2. Ricardo Wurmus2023-06-02
* gnu: r-delayedarray: Update to 0.26.3.•••* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.26.3. Ricardo Wurmus2023-06-02
* gnu: r-dearseq: Update to 1.12.1.•••* gnu/packages/bioconductor.scm (r-dearseq): Update to 1.12.1. Ricardo Wurmus2023-06-02
* gnu: r-bambu: Update to 3.2.3.•••* gnu/packages/bioconductor.scm (r-bambu): Update to 3.2.3. Ricardo Wurmus2023-06-02
* gnu: r-alpine: Update to 1.26.0.•••* gnu/packages/bioconductor.scm (r-alpine): Update to 1.26.0. Ricardo Wurmus2023-06-02
* gnu: r-anvil: Update to 1.12.3.•••* gnu/packages/bioconductor.scm (r-anvil): Update to 1.12.3. Ricardo Wurmus2023-06-02