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* gnu: libarchive: Replace with 3.3.1 [security fixes].Kei Kebreau2017-05-08
| | | | | | | Fixes CVE-2016-{10209,10350} and CVE-2017-5601. * gnu/packages/backup.scm (libarchive)[replacement]: New field. (libarchive-3.3.1): New variable.
* gnu: duplicity: Update to 0.7.12.Thomas Danckaert2017-04-25
| | | | * gnu/packages/backup.scm (duplicity): Update to 0.7.12.
* Merge branch 'master' into core-updatesMarius Bakke2017-03-30
|\ | | | | | | Most conflicts are from 6fd52309b8f52c9bb59fccffac53e029ce94b698.
| * gnu: python-pytest-2.9.2: Replace with python-pytest-3.0.Leo Famulari2017-03-28
| | | | | | | | | | | | | | | | | | | | * gnu/packages/python.scm (python-pytest-2.9.2): Replace with ... (python-pytest-3.0): ... new variable. (python2-pytest-3.0): New variable. (python-cryptography, python2-cryptography, python-sphinx-1.5.3)[native-inputs]: Replace python-pytest-2.9.2 with python-pytest-3.0. * gnu/packages/backup.scm (borg)[native-inputs]: Likewise. gnu/packages/calendar.scm (khal)[native-inputs]: Likewise.
* | Merge remote-tracking branch 'origin/master' into core-updatesEfraim Flashner2017-03-22
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| * gnu: obnam: Enable tests.Arun Isaac2017-03-20
| | | | | | | | | | | | | | * gnu/packages/backup.scm (obnam)[arguments]: Replace 'check' phase with custom function. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* | Merge remote-tracking branch 'origin/master' into core-updatesEfraim Flashner2017-03-13
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| * gnu: Add obnam.Arun Isaac2017-03-10
| | | | | | | | | | | | * gnu/packages/backup.scm (obnam): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* | Merge branch 'master' into core-updatesLudovic Courtès2017-03-09
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| * gnu: Add rsnapshot.Thomas Danckaert2017-03-09
| | | | | | | | * gnu/packages/backup.scm (rsnapshot): New variable.
| * gnu: Remove unneeded imports.Ludovic Courtès2017-03-08
| | | | | | | | | | * gnu/packages/backup.scm: Remove unneeded (guix build utils) import. * gnu/packages/finance.scm: Likewise.
| * Merge branch 'master' into python-testsMarius Bakke2017-02-27
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| * | gnu: duplicity: Fix tests.Marius Bakke2017-02-19
| | | | | | | | | | | | | | | * gnu/packages/backup.scm (duplicity)[native-inputs]: Add PAR2CMDLINE. [arguments]: Move /bin/sh substitution to 'patch-source' phase and add one file.
* | | Merge remote-tracking branch 'origin/master' into core-updatesEfraim Flashner2017-02-20
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| * | gnu: borg: Update to 1.0.10.Tobias Geerinckx-Rice2017-02-14
| |/ | | | | | | * gnu/packages/backup.scm (borg): Update to 1.0.10.
* | Merge branch 'master' into core-updatesLudovic Courtès2017-01-23
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| * gnu: duplicity: Update to 0.7.11.Thomas Danckaert2017-01-23
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/backup.scm (duplicity): Update to 0.7.11. [source]: Remove patches. [inputs]: Add lftp, update gnupg, remove python-2, make python2-lockfile a propagated input, make python2-mock a native-input. [propagated-inputs]: Add python2-lockfile, python2-urllib3. [native-inputs]: Add python2-pexpect, python2-mock. [arguments]: Add build phase to embed gnupg store name. * gnu/packages/patches/duplicity-piped-password.patch: Delete it. * gnu/packages/patches/duplicity-test_selection-tmp.patch: Delete it. * gnu/local.mk (dist_patch_DATA): Remove patches. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* | Merge branch 'master' into core-updatesLeo Famulari2017-01-06
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| * gnu: Add wimlib.Tobias Geerinckx-Rice2017-01-04
| | | | | | | | * gnu/packages/backup.scm (wimlib): New variable.
| * gnu: borg: Update to 1.0.9.Leo Famulari2016-12-20
| | | | | | | | | | | | * gnu/packages/backup.scm (borg): Update to 1.0.9. [arguments]: Run the check phase in its own directory. Skip the test 'test_get_security_dir'.
| * gnu: duplicity: Use 'modify-phases' syntax.Marius Bakke2016-12-13
| | | | | | | | * gnu/packages/backup.scm (duplicity)[arguments]: Use 'modify-phases'.
| * gnu: borg: Fix the test suite.Leo Famulari2016-11-30
| | | | | | | | | | * gnu/packages/backup.scm (borg)[arguments]: Use add-installed-pythonpath and disable tests related to FUSE.
| * gnu: Remove python-setuptools and python2-setuptools from inputs (part 2)Hartmut Goebel2016-11-15
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This patch contains the changes where removing setuptools from the inputs affected some code-lines beside. * gnu/packages/admin.scm (ansible): Remove all [inputs], [native-inputs] and [propagated-inputs] where python-setuptools or python2-setuptools are the sole entries. Remove python-setuptools and python2-setuptools listed on a line by its own from [inputs], [native-inputs] and [propagated-inputs]. * gnu/packages/backup.scm (duplicity): Likewise. * gnu/packages/bioinformatics.scm (bamm, python2-pybedtools, python2-bx-python, python2-dendropy, python-pysam, python2-pysam, clipper, crossmap, cutadapt, deeptools, grit, idr, python2-warpedlmm, pbtranscript-tofu, seqmagick): Likewise. * gnu/packages/docbook.scm (dblatex): Likewise. * gnu/packages/freedesktop.scm (python-pyxdg, python2-pyxdg): Likewise. * gnu/packages/lirc.scm (python2-lirc): Likewise. * gnu/packages/mp3.scm (eyed3): Likewise. * gnu/packages/nutrition.scm (gourmet): Likewise. * gnu/packages/openstack.scm (python-hacking, python2-hacking, python-os-testr, python2-os-testr, python-stevedore, python2-stevedore, python-tempest-lib, python2-tempest-lib, python-oslo.log, python2-oslo.log, python-keystoneclient, python2-keystoneclient): Likewise. * gnu/packages/password-utils.scm (assword): Likewise. * gnu/packages/python.scm (python-passlib, python2-passlib, python-babel, python2-babel, python-parse-type, python-pytest, python2-pytest, python-scripttest, python2-scripttest, python-testtools, python2-testtools, python-testscenarios, python2-testscenarios, python-subunit, python2-subunit, python-pbr-0.11, python-pbr, python2-pbr, python-testrepository, python2-testrepository, behave, python-wheel, python2-wheel, python-requests, python2-requests, python-jsonschema, python2-jsonschema, python-pyjwt, python2-pyjwt, python-virtualenv, python2-virtualenv, python-jinja2, python2-jinja2, python-joblib, python2-joblib, python-sphinx, python2-sphinx, python-feedgenerator, python2-feedgenerator, python-scikit-image, python2-scikit-image, python-redis, python2-redis, python2-fastlmm, python-numpydoc, python2-numpydoc, python-matplotlib, python2-matplotlib, python2-pysnptools, python-rpy2, python2-rpy2, python-pillow, python2-pillow, python-pycparser, python2-pycparser, python-cffi, python2-cffi, python-cairocffi, python2-cairocffi, python-drmaa, python2-drmaa, python-pathpy, python2-pathpy, python-simplegeneric, python2-simplegeneric, python-ipython, python2-ipython, python-apsw, python2-apsw, python-lxml, python2-lxml, python-networkx, python2-networkx, python-pyzmq, python2-pyzmq, python-mccabe, python2-mccabe, python-mccabe-0.2.1, python-flake8, python2-flake8, python-flake8-2.2.4, python-mistune, python2-mistune, python-ptyprocess, python2-ptyprocess, python-llfuse, python2-llfuse, python-webob, python2-webob, python-xlrd, python2-xlrd, python-tables, python2-tables, python-pip, python2-pip, python-libarchive-c, python2-libarchive-c, python-docopt, python2-docopt, python-pyrfc3339, python2-pyrfc3339, python-configobj, python2-configobj, python-clint, python2-clint, python-rply, python2-rply, python2-rpython, python-widgetsnbextension, python2-widgetsnbextension jupyter, python-jupyter-console, python2-jupyter-console, python-hy, python2-hy, python-urllib3, python2-urllib3, python-rsa, python2-rsa, python-tox, python2-tox, python2-hypothesis, python-paste, python2-paste, python-pastescript, python2-pastescript, python2-unicodecsv, python-pkgconfig, python2-pkgconfig, python2-rope, python-sqlparse, python2-sqlparse, python-gevent, python2-gevent, python-tabulate, python2-tabulate, python-arrow, python2-arrow, python-cleo, python2-cleo, python-fake-factory, python2-fake-factory, ptpython): Likewise. * gnu/packages/rdf.scm (python-rdflib, python2-rdflib): Likewise. * gnu/packages/terminals.scm (asciinema): Likewise. * gnu/packages/version-control.scm (git-annex-remote-hubic): Likewise. * gnu/packages/xdisorg.scm (arandr): Likewise.
| * gnu: Remove python-setuptools and python2-setuptools from inputs (part 1b)Hartmut Goebel2016-11-15
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This patch contains the changes in all modules beside python.scm where removing setuptools from the inputs could be achieved by removing complete lines. * gnu/packages/admin.scm (graphios, thefuck): Remove all [inputs], [native-inputs] and [propagated-inputs] where python-setuptools or python2-setuptools are the sole entries. Remove python-setuptools and python2-setuptools listed on a line by its own from [inputs], [native-inputs] and [propagated-inputs]. * gnu/packages/backup.scm (rdiff-backup): Likewise. * gnu/packages/bioinformatics.scm (htseq, macs, python2-pbcore, rseqc, multiqc): Likewise. * gnu/packages/django.scm (python-django, python2-django, python-django-simple-math-captcha, python2-django-simple-math-captcha): Likewise. * gnu/packages/docker.scm (python-docker-py, docker-compose): Likewise. * gnu/packages/game-development.scm (python-pygame): Likewise. * gnu/packages/key-mon.scm (key-mon): Likewise. * gnu/packages/mail.scm (khard): Likewise. * gnu/packages/music.scm (beets, python2-pyechonest): Likewise. * gnu/packages/openstack.scm (python-bandit, python2-bandit, python-debtcollector, python2-debtcollector, python-mox3, python2-mox3, python-os-client-config, python2-os-client-config, python-oslo.config, python2-oslo.config, python-oslo.context, python2-oslo.context, python-oslo.i18n, python2-oslo.i18n, python-oslo.serialization, python2-oslo.serialization, python-oslosphinx, python2-oslosphinx, python-oslotest, python2-oslotest, python-oslo.utils, python2-oslo.utils, python-swiftclient, python2-swiftclient): Likewise. * gnu/packages/pdf.scm (pdfposter): Likewise. * gnu/packages/tls.scm (python-acme, python2-acme): Likewise.
* | gnu: libarchive: Update to 3.2.2.Leo Famulari2016-11-28
|/ | | | | | | | | | | * gnu/packages/backup.scm (libarchive): Update to 3.2.2. [source]: Remove obsolete patches. * gnu/packages/patches/libarchive-7zip-heap-overflow.patch, gnu/packages/patches/libarchive-fix-filesystem-attacks.patch, gnu/packages/patches/libarchive-fix-symlink-check.patch, gnu/packages/patches/libarchive-safe_fprintf-buffer-overflow.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
* gnu: borg: Run the tests with python-pytest-2.9.2.Leo Famulari2016-10-31
| | | | * gnu/packages/backup.scm (borg)[native-inputs]: Use python-pytest-2.9.2.
* Merge branch 'master' into core-updatesLeo Famulari2016-10-29
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| * gnu: borg: Update to 1.0.8.Tobias Geerinckx-Rice2016-10-29
| | | | | | | | * gnu/packages/backup.scm (borg): Update to 1.0.8.
* | Merge branch 'master' into core-updatesMark H Weaver2016-10-23
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| * gnu: borg: Install more documentation.Leo Famulari2016-10-19
| | | | | | | | | | * gnu/packages/backup.scm (borg)[arguments]: Install more documentation in 'install-doc' phase. Use (srfi srfi-26).
* | gnu: borg: Run the test suite.Leo Famulari2016-10-11
| | | | | | | | | | | | * gnu/packages/backup.scm (borg)[native-inputs]: Add python-pytest. [arguments]: Invoke the tests with python-pytest after the install phase. Set HOME=/tmp in the 'set-env' phase.
* | gnu: attic: Disable the test suite.Leo Famulari2016-10-11
| | | | | | | | * gnu/packages/backup.scm (attic)[arguments]: Set #:tests? #f.
* | gnu: libarchive: Incorporate grafted security patches.Leo Famulari2016-10-03
|/ | | | | | | * gnu/packages/backup.scm (libarchive)[source]: Add patches from libarchive/fixed. [replacement]: Remove field. (libarchive/fixed): Remove variable.
* gnu: libarchive: Fix several security issues.Leo Famulari2016-10-03
| | | | | | | | | | * gnu/packages/backup.scm (libarchive)[replacement]: New field. (libarchive/fixed): New variable. * gnu/packages/patches/libarchive-7zip-heap-overflow.patch, gnu/packages/patches/libarchive-fix-symlink-check.patch, gnu/packages/patches/libarchive-fix-filesystem-attacks.patch, gnu/packages/patches/libarchive-safe_fprintf-buffer-overflow.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them.
* gnu: attic: Superseded by borg.Leo Famulari2016-09-28
| | | | * gnu/packages/backup.scm (attic)[properties]: New field.
* gnu: Add par2cmdline.Brendan Tildesley2016-09-15
| | | | * gnu/packages/backup.scm (par2cmdline): New variable.
* gnu: borg: Rebuild generated C files.Efraim Flashner2016-09-05
| | | | | * gnu/packages/backup.scm (borg)[source]: Remove generated '.c' files. [native-inputs]: Add python-cython.
* gnu: borg: Update to 1.0.7.Leo Famulari2016-08-19
| | | | * gnu/packages/backup.scm (borg): Update to 1.0.7.
* Merge remote-tracking branch 'origin/master' into core-updatesAndreas Enge2016-07-25
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| * gnu: hdup: Update source url.Efraim Flashner2016-07-25
| | | | | | | | * gnu/packages/backup.scm (hdup)[source]: Update url.
* | Merge branch 'master' into core-updatesLudovic Courtès2016-07-20
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| * gnu: borg: Update to 1.0.6.Leo Famulari2016-07-15
| | | | | | | | | | * gnu/packages/backup.scm (borg): Update to 1.0.6. [source]: Use pypi-uri.
* | gnu: libarchive: Update to 3.2.1.Efraim Flashner2016-06-21
| | | | | | | | | | * gnu/packages/backup.scm (libarchive): Update to 3.2.1. [arguments]: Build with '-std=C99'.
* | Merge branch 'master' into core-updatesLudovic Courtès2016-06-07
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| * gnu: borg: Update to 1.0.3.Leo Famulari2016-05-23
| | | | | | | | | | * gnu/packages/backup.scm (borg): Update to 1.0.3. [source]: Remove pypi-uri.
* | gnu: libarchive: Update to 3.2.0.Leo Famulari2016-05-13
|/ | | | | | | | | | | | | * gnu/packages/patches/libarchive-CVE-2013-0211.patch, gnu/packages/patches/libarchive-CVE-2016-1541.patch, gnu/packages/patches/libarchive-bsdtar-test.patch, gnu/packages/patches/libarchive-fix-lzo-test-case.patch, gnu/packages/patches/libarchive-mtree-filename-length-fix.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. * gnu/packages/backup.scm (libarchive): Update to 3.2.0. [source]: Remove deleted patches. [replacement]: Remove. (libarchive/fixed): Remove variable.
* gnu: libarchive: Fix CVE-2016-1541.Leo Famulari2016-05-11
| | | | | | | * gnu/packages/backup.scm (libarchive)[replacement]: New field. (libarchive/fixed): New variable. * gnu/packages/patches/libarchive-CVE-2016-1541.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* gnu: borg: Update to 1.0.2.Leo Famulari2016-04-24
| | | | * gnu/packages/backup.scm (borg): Update to 1.0.2.
* gnu: packages: Use 'search-patches' everywhere.Alex Kost2016-04-14
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/abiword.scm: Use 'search-patches' for 'patches' field. * gnu/packages/acl.scm: Likewise. * gnu/packages/admin.scm: Likewise. * gnu/packages/algebra.scm: Likewise. * gnu/packages/animation.scm: Likewise. * gnu/packages/apr.scm: Likewise. * gnu/packages/audacity.scm: Likewise. * gnu/packages/audio.scm: Likewise. * gnu/packages/autotools.scm: Likewise. * gnu/packages/avahi.scm: Likewise. * gnu/packages/backup.scm: Likewise. * gnu/packages/base.scm: Likewise. * gnu/packages/bash.scm: Likewise. * gnu/packages/bioinformatics.scm: Likewise. * gnu/packages/cdrom.scm: Likewise. * gnu/packages/ci.scm: Likewise. * gnu/packages/cmake.scm: Likewise. * gnu/packages/cpio.scm: Likewise. * gnu/packages/cross-base.scm: Likewise. * gnu/packages/dico.scm: Likewise. * gnu/packages/doxygen.scm: Likewise. * gnu/packages/ebook.scm: Likewise. * gnu/packages/elf.scm: Likewise. * gnu/packages/emacs.scm: Likewise. * gnu/packages/engineering.scm: Likewise. * gnu/packages/firmware.scm: Likewise. * gnu/packages/flashing-tools.scm: Likewise. * gnu/packages/fltk.scm: Likewise. * gnu/packages/ftp.scm: Likewise. * gnu/packages/games.scm: Likewise. * gnu/packages/gawk.scm: Likewise. * gnu/packages/gcc.scm: Likewise. * gnu/packages/gd.scm: Likewise. * gnu/packages/ghostscript.scm: Likewise. * gnu/packages/glib.scm: Likewise. * gnu/packages/gnome.scm: Likewise. * gnu/packages/gnucash.scm: Likewise. * gnu/packages/gnunet.scm: Likewise. * gnu/packages/gnupg.scm: Likewise. * gnu/packages/gnuzilla.scm: Likewise. * gnu/packages/graphics.scm: Likewise. * gnu/packages/grub.scm: Likewise. * gnu/packages/gtk.scm: Likewise. * gnu/packages/guile.scm: Likewise. * gnu/packages/icu4c.scm: Likewise. * gnu/packages/idutils.scm: Likewise. * gnu/packages/image.scm: Likewise. * gnu/packages/imagemagick.scm: Likewise. * gnu/packages/irc.scm: Likewise. * gnu/packages/ldc.scm: Likewise. * gnu/packages/libcanberra.scm: Likewise. * gnu/packages/libevent.scm: Likewise. * gnu/packages/libreoffice.scm: Likewise. * gnu/packages/libunwind.scm: Likewise. * gnu/packages/libusb.scm: Likewise. * gnu/packages/linux.scm: Likewise. * gnu/packages/lirc.scm: Likewise. * gnu/packages/llvm.scm: Likewise. * gnu/packages/lsh.scm: Likewise. * gnu/packages/lua.scm: Likewise. * gnu/packages/lxqt.scm: Likewise. * gnu/packages/mail.scm: Likewise. * gnu/packages/maths.scm: Likewise. * gnu/packages/mcrypt.scm: Likewise. * gnu/packages/messaging.scm: Likewise. * gnu/packages/mit-krb5.scm: Likewise. * gnu/packages/mp3.scm: Likewise. * gnu/packages/multiprecision.scm: Likewise. * gnu/packages/music.scm: Likewise. * gnu/packages/ninja.scm: Likewise. * gnu/packages/nvi.scm: Likewise. * gnu/packages/ocaml.scm: Likewise. * gnu/packages/orpheus.scm: Likewise. * gnu/packages/ots.scm: Likewise. * gnu/packages/parallel.scm: Likewise. * gnu/packages/patchutils.scm: Likewise. * gnu/packages/pcre.scm: Likewise. * gnu/packages/pdf.scm: Likewise. * gnu/packages/perl.scm: Likewise. * gnu/packages/plotutils.scm: Likewise. * gnu/packages/polkit.scm: Likewise. * gnu/packages/pulseaudio.scm: Likewise. * gnu/packages/python.scm: Likewise. * gnu/packages/qemu.scm: Likewise. * gnu/packages/qt.scm: Likewise. * gnu/packages/ratpoison.scm: Likewise. * gnu/packages/rdf.scm: Likewise. * gnu/packages/readline.scm: Likewise. * gnu/packages/rush.scm: Likewise. * gnu/packages/scheme.scm: Likewise. * gnu/packages/screen.scm: Likewise. * gnu/packages/sdl.scm: Likewise. * gnu/packages/slim.scm: Likewise. * gnu/packages/ssh.scm: Likewise. * gnu/packages/tcl.scm: Likewise. * gnu/packages/tcsh.scm: Likewise. * gnu/packages/texinfo.scm: Likewise. * gnu/packages/tls.scm: Likewise. * gnu/packages/tor.scm: Likewise. * gnu/packages/tv.scm: Likewise. * gnu/packages/valgrind.scm: Likewise. * gnu/packages/version-control.scm: Likewise. * gnu/packages/video.scm: Likewise. * gnu/packages/vpn.scm: Likewise. * gnu/packages/vtk.scm: Likewise. * gnu/packages/w3m.scm: Likewise. * gnu/packages/web.scm: Likewise. * gnu/packages/wicd.scm: Likewise. * gnu/packages/wm.scm: Likewise. * gnu/packages/xdisorg.scm: Likewise. * gnu/packages/xfce.scm: Likewise. * gnu/packages/xiph.scm: Likewise. * gnu/packages/xml.scm: Likewise. * gnu/packages/xorg.scm: Likewise. * gnu/packages/zip.scm: Likewise.
* gnu: borg: Update to 1.0.1.Leo Famulari2016-04-11
| | | | * gnu/packages/backup.scm (borg): Update to 1.0.1.
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