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* gnu: Use INSTALL-FILE where appropriate.Tobias Geerinckx-Rice2017-03-15
| | | | | | | | | | | | * gnu/packages/admin.scm (wpa-supplicant-minimal): Substitute the simpler INSTALL-FILE for COPY-FILE when invoked with redundant arguments. * gnu/packages/bioinformatics.scm (couger, aragorn, express-beta-diversity, edirect, fasttree, rsem, samtools-0.1): Likewise. * gnu/packages/code.scm (withershins): Likewise. * gnu/packages/conky.scm (conky): Likewise. * gnu/packages/debug.scm (delta, american-fuzzy-lop): Likewise. * gnu/packages/emacs.scm (emacs-mit-scheme-doc): Likewise. * gnu/packages/engineering.scm (librecad): Likewise.
* gnu: inetutils: Disable parallel tests.Marius Bakke2017-03-09
| | | | * gnu/packages/admin.scm (inetutils)[arguments]: Add #:parallel-tests? #f.
* gnu: inetutils: Set the $localstatedir.Leo Famulari2017-03-09
| | | | | | | This is a followup to commit 6f5d28f9d05aaa9743b3aac6bceb2c6323122d2d. * gnu/packages/admin.scm (inetutils)[arguments]: Pass '--localstatedir=/var' to #:configure-flags.
* gnu: inetutils: Enable tests.Maxim Cournoyer2017-03-08
| | | | | | | | * gnu/packages/admin.scm (inetutils)[arguments]: Remove '#:tests? #f' and #:configure-flags. [native-inputs]: Add net-tools. Signed-off-by: Leo Famulari <leo@famulari.name>
* Merge branch 'python-tests'Marius Bakke2017-03-03
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| * Merge branch 'master' into python-testsMarius Bakke2017-02-27
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| * \ Merge branch 'master' into python-testsMarius Bakke2017-02-13
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| * \ \ Merge branch 'master' into python-testsLeo Famulari2017-01-13
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| * | | | gnu: thefuck: Correct inputs and disable tests.Marius Bakke2016-12-19
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/admin.scm (thefuck)[arguments]: Set #:tests? #f. [inputs]: Move everything to ... [propagated-inputs]: ... here. Remove duplicate [inputs] and python-setuptools. [native-inputs]: Add python-pytest, python-pytest-mock and python-mock.
* | | | | gnu: cbatticon: Update to 1.6.5.Tobias Geerinckx-Rice2017-03-02
| | | | | | | | | | | | | | | | | | | | * gnu/packages/admin.scm (cbatticon): Update to 1.6.5.
* | | | | gnu: di: Update to 4.43.Tobias Geerinckx-Rice2017-03-02
| |_|_|/ |/| | | | | | | | | | | * gnu/packages/admin.scm (di): Update to 4.43.
* | | | gnu: shadow: Fix CVE-2017-2616.Leo Famulari2017-02-23
| |_|/ |/| | | | | | | | | | | | | | * gnu/packages/patches/shadow-CVE-2017-2616.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/admin.scm (shadow): Use it.
* | | gnu: shadow: Update to 4.4.ng02017-02-11
| | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/admin.scm (shadow): Update to 4.4. [source]: Adjust URL. * gnu/packages/patches/shadow-4.4-su-snprintf-fix.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patch. Signed-off-by: Leo Famulari <leo@famulari.name>
* | | gnu: shadow: Use 'modify-phases'.ng02017-02-11
| | | | | | | | | | | | * gnu/packages/admin.scm (shadow): Use 'modify-phases'.
* | | gnu: Add sedsed.ng02017-02-10
| | | | | | | | | | | | | | | | | | * gnu/packages/admin.scm (sedsed): New variable. Signed-off-by: Kei Kebreau <kei@openmailbox.org>
* | | gnu: isc-dhcp: Update bundled bind to 9.9.9-P6.Efraim Flashner2017-02-09
| | | | | | | | | | | | * gnu/packages/admin.scm (isc-dhcp): Update bundled bind to 9.9.9-P6.
* | | gnu: tcpdump: Fetch source from tcpdump.org.Leo Famulari2017-02-06
| | | | | | | | | | | | * gnu/packages/admin.scm (tcpdump)[source]: Remove temporary alternate URL.
* | | gnu: thefuck: Fix execution.Eric Bavier2017-02-02
| | | | | | | | | | | | | | | | | | Follow-up to 4a6b2a21bf36a6d0170d7568073f0a03ef3004f3 * gnu/packages/admin.scm (thefuck): Fix 'inputs' -> 'native-inputs'.
* | | gnu: tcpdump: Update to 4.9.0 [security fixes].Leo Famulari2017-01-30
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Fixes CVE-2016-{7922,7923,7924,7925,7926,7927,7928,7929,7930,7931,7932,7933 7934,7935,7936,7937,7938,7939,7940,7973,7974,7975,7983,7984,7985,7986,7992,7993, 8574,8575} and CVE-2017-{5202,5203,5204,5205,5341,5342,5482,5483,5484,5485, 5486}. * gnu/packages/admin.scm (tcpdump): Update to 4.9.0. [source]: Add alternate URL and set the file-name.
* | | gnu: libpcap: Update to 1.8.1.Leo Famulari2017-01-30
| | | | | | | | | | | | * gnu/packages/admin.scm (libpcap): Update to 1.8.1.
* | | gnu: ansible: Update to 2.2.1 [fixes CVE-2016-9587].Ludovic Courtès2017-01-19
| | | | | | | | | | | | * gnu/packages/admin.scm (ansible): Update to 2.2.1.
* | | gnu: Move Kerberos implemetations to (gnu packages kerberos).Ludovic Courtès2017-01-19
| |/ |/| | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/mit-krb5.scm: Remove. * gnu/packages/shishi.scm: Remove. * gnu/packages/kerberos.scm: New file, from the concatenation of these two. * gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly. * gnu/packages/admin.scm, gnu/packages/cyrus-sasl.scm, gnu/packages/gnome.scm, gnu/packages/gnuzilla.scm, gnu/packages/gsasl.scm, gnu/packages/java.scm, gnu/packages/networking.scm, gnu/packages/nfs.scm, gnu/packages/onc-rpc.scm, gnu/packages/ssh.scm, gnu/packages/web.scm: Adjust accordingly.
* | gnu: isc-dhcp: Update bundled bind to 9.9.9-P5 [security fixes].Leo Famulari2017-01-11
| | | | | | | | | | | | Fixes CVE-2016-{9131,9147,9444}. * gnu/packages/admin.scm (isc-dhcp): Update bundled bind to 9.9.9-P5.
* | gnu: Use HTTPS for all sourceforge.net home pages.Tobias Geerinckx-Rice2017-01-04
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/admin.scm (mingetty, clusterssh)[home-page]: Use HTTPS. * gnu/packages/audio.scm (libbs2b, soxr)[home-page]: Likewise. * gnu/packages/bioinformatics.scm (bless)[home-page]: Likewise. * gnu/packages/display-managers.scm (slim)[home-page]: Likewise. * gnu/packages/games.scm (extremetuxracer)[home-page]: Likewise. * gnu/packages/ghostscript.scm (gs-fonts)[home-page]: Likewise. * gnu/packages/haskell.scm (ghc-regex-base, ghc-regex-posix, ghc-regex-compat)[home-page]: Likewise. * gnu/packages/image.scm (imlib2)[home-page]: Likewise. * gnu/packages/libreoffice.scm (librevenge, libcmis, libodfgen, libmwaw) [home-page]: Likewise. * gnu/packages/linux.scm (hdparm, acpid, libavc1394, rng-tools) [home-page]: Likewise. * gnu/packages/mail.scm (esmtp)[home-page]: Likewise. * gnu/packages/mp3.scm (ripperx)[home-page]: Likewise. * gnu/packages/onc-rpc.scm (libtirpc)[home-page]: Likewise. * gnu/packages/perl.scm (perl-czplib)[home-page]: Likewise. * gnu/packages/python.scm (python-pyasn1-modules)[home-page]: Likewise. * gnu/packages/xdisorg.scm (xosd)[home-page]: Likewise.
* | gnu: sudo: Update to 1.8.19p1.Efraim Flashner2017-01-03
| | | | | | | | * gnu/packages/admin.scm (sudo): Update to 1.8.19p1.
* | gnu: nmap: Update to 7.40.Marius Bakke2016-12-21
|/ | | | * gnu/packages/admin.scm (nmap): Update to 7.40.
* gnu: sunxi-tools: Update to 1.4.2.Danny Milosavljevic2016-12-11
| | | | | | * gnu/packages/admin.scm (sunxi-tools): Update to 1.4.2. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: shepherd: Update to 0.3.2.Ludovic Courtès2016-12-04
| | | | | * gnu/packages/admin.scm (shepherd): Update to 0.3.2. [properties]: New field.
* gnu: thefuck: Fix build.Hartmut Goebel2016-11-15
| | | | | | | Requires setuptools >= 17.1 due to some features used, while our python currently only includes 12.0. * gnu/packages/admin.scm (thefuck): Add setuptools to native-inputs.
* gnu: Remove python-setuptools and python2-setuptools from inputs (part 2)Hartmut Goebel2016-11-15
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This patch contains the changes where removing setuptools from the inputs affected some code-lines beside. * gnu/packages/admin.scm (ansible): Remove all [inputs], [native-inputs] and [propagated-inputs] where python-setuptools or python2-setuptools are the sole entries. Remove python-setuptools and python2-setuptools listed on a line by its own from [inputs], [native-inputs] and [propagated-inputs]. * gnu/packages/backup.scm (duplicity): Likewise. * gnu/packages/bioinformatics.scm (bamm, python2-pybedtools, python2-bx-python, python2-dendropy, python-pysam, python2-pysam, clipper, crossmap, cutadapt, deeptools, grit, idr, python2-warpedlmm, pbtranscript-tofu, seqmagick): Likewise. * gnu/packages/docbook.scm (dblatex): Likewise. * gnu/packages/freedesktop.scm (python-pyxdg, python2-pyxdg): Likewise. * gnu/packages/lirc.scm (python2-lirc): Likewise. * gnu/packages/mp3.scm (eyed3): Likewise. * gnu/packages/nutrition.scm (gourmet): Likewise. * gnu/packages/openstack.scm (python-hacking, python2-hacking, python-os-testr, python2-os-testr, python-stevedore, python2-stevedore, python-tempest-lib, python2-tempest-lib, python-oslo.log, python2-oslo.log, python-keystoneclient, python2-keystoneclient): Likewise. * gnu/packages/password-utils.scm (assword): Likewise. * gnu/packages/python.scm (python-passlib, python2-passlib, python-babel, python2-babel, python-parse-type, python-pytest, python2-pytest, python-scripttest, python2-scripttest, python-testtools, python2-testtools, python-testscenarios, python2-testscenarios, python-subunit, python2-subunit, python-pbr-0.11, python-pbr, python2-pbr, python-testrepository, python2-testrepository, behave, python-wheel, python2-wheel, python-requests, python2-requests, python-jsonschema, python2-jsonschema, python-pyjwt, python2-pyjwt, python-virtualenv, python2-virtualenv, python-jinja2, python2-jinja2, python-joblib, python2-joblib, python-sphinx, python2-sphinx, python-feedgenerator, python2-feedgenerator, python-scikit-image, python2-scikit-image, python-redis, python2-redis, python2-fastlmm, python-numpydoc, python2-numpydoc, python-matplotlib, python2-matplotlib, python2-pysnptools, python-rpy2, python2-rpy2, python-pillow, python2-pillow, python-pycparser, python2-pycparser, python-cffi, python2-cffi, python-cairocffi, python2-cairocffi, python-drmaa, python2-drmaa, python-pathpy, python2-pathpy, python-simplegeneric, python2-simplegeneric, python-ipython, python2-ipython, python-apsw, python2-apsw, python-lxml, python2-lxml, python-networkx, python2-networkx, python-pyzmq, python2-pyzmq, python-mccabe, python2-mccabe, python-mccabe-0.2.1, python-flake8, python2-flake8, python-flake8-2.2.4, python-mistune, python2-mistune, python-ptyprocess, python2-ptyprocess, python-llfuse, python2-llfuse, python-webob, python2-webob, python-xlrd, python2-xlrd, python-tables, python2-tables, python-pip, python2-pip, python-libarchive-c, python2-libarchive-c, python-docopt, python2-docopt, python-pyrfc3339, python2-pyrfc3339, python-configobj, python2-configobj, python-clint, python2-clint, python-rply, python2-rply, python2-rpython, python-widgetsnbextension, python2-widgetsnbextension jupyter, python-jupyter-console, python2-jupyter-console, python-hy, python2-hy, python-urllib3, python2-urllib3, python-rsa, python2-rsa, python-tox, python2-tox, python2-hypothesis, python-paste, python2-paste, python-pastescript, python2-pastescript, python2-unicodecsv, python-pkgconfig, python2-pkgconfig, python2-rope, python-sqlparse, python2-sqlparse, python-gevent, python2-gevent, python-tabulate, python2-tabulate, python-arrow, python2-arrow, python-cleo, python2-cleo, python-fake-factory, python2-fake-factory, ptpython): Likewise. * gnu/packages/rdf.scm (python-rdflib, python2-rdflib): Likewise. * gnu/packages/terminals.scm (asciinema): Likewise. * gnu/packages/version-control.scm (git-annex-remote-hubic): Likewise. * gnu/packages/xdisorg.scm (arandr): Likewise.
* gnu: Remove python-setuptools and python2-setuptools from inputs (part 1b)Hartmut Goebel2016-11-15
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This patch contains the changes in all modules beside python.scm where removing setuptools from the inputs could be achieved by removing complete lines. * gnu/packages/admin.scm (graphios, thefuck): Remove all [inputs], [native-inputs] and [propagated-inputs] where python-setuptools or python2-setuptools are the sole entries. Remove python-setuptools and python2-setuptools listed on a line by its own from [inputs], [native-inputs] and [propagated-inputs]. * gnu/packages/backup.scm (rdiff-backup): Likewise. * gnu/packages/bioinformatics.scm (htseq, macs, python2-pbcore, rseqc, multiqc): Likewise. * gnu/packages/django.scm (python-django, python2-django, python-django-simple-math-captcha, python2-django-simple-math-captcha): Likewise. * gnu/packages/docker.scm (python-docker-py, docker-compose): Likewise. * gnu/packages/game-development.scm (python-pygame): Likewise. * gnu/packages/key-mon.scm (key-mon): Likewise. * gnu/packages/mail.scm (khard): Likewise. * gnu/packages/music.scm (beets, python2-pyechonest): Likewise. * gnu/packages/openstack.scm (python-bandit, python2-bandit, python-debtcollector, python2-debtcollector, python-mox3, python2-mox3, python-os-client-config, python2-os-client-config, python-oslo.config, python2-oslo.config, python-oslo.context, python2-oslo.context, python-oslo.i18n, python2-oslo.i18n, python-oslo.serialization, python2-oslo.serialization, python-oslosphinx, python2-oslosphinx, python-oslotest, python2-oslotest, python-oslo.utils, python2-oslo.utils, python-swiftclient, python2-swiftclient): Likewise. * gnu/packages/pdf.scm (pdfposter): Likewise. * gnu/packages/tls.scm (python-acme, python2-acme): Likewise.
* Merge branch 'master' into core-updatesMark H Weaver2016-11-07
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| * gnu: nmap: Update to 7.31.Marius Bakke2016-11-06
| | | | | | | | | | * gnu/packages/admin.scm (nmap): Update to 7.31. [arguments]: Add phase 'patch-Makefile' to prevent lua from being built.
* | Merge branch 'master' into core-updatesMark H Weaver2016-11-06
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| * gnu: sunxi-tools: Update to 1.4.1.Danny Milosavljevic2016-11-03
| | | | | | | | | | | | | | | | * gnu/packages/admin.scm (sunxi-tools): Update to 1.4.1. [arguments]: Add "CC=gcc" "all" to #:make-flags. Remove 'fix-Makefile' phase. Add 'install' phase. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* | Merge branch 'master' into core-updatesLeo Famulari2016-11-02
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| * gnu: isc-dhcp: Update to 4.3.5 [fixes CVE-2016-8864].Leo Famulari2016-11-01
| | | | | | | | | | * gnu/packages/admin.scm (isc-dhcp): Update to 4.3.5. Update bundled 'bind' to 9.9.9-P4.
* | gnu: audit: Use GnuTLS instead of OpenSSL.Leo Famulari2016-10-23
| | | | | | | | * gnu/packages/admin.scm (audit)[inputs]: Replace openssl with gnutls.
* | Merge branch 'master' into core-updatesMark H Weaver2016-10-12
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| * gnu: wpa-supplicant: Update to 2.6.Marius Bakke2016-10-09
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/admin.scm (wpa-supplicant-minimal)[source]: Update to 2.6. Remove 'patches' field. * gnu/packages/patches/wpa-supplicant-CVE-2015-5310.patch, gnu/packages/patches/wpa-supplicant-CVE-2015-5314.patch, gnu/packages/patches/wpa-supplicant-CVE-2015-5315.patch, gnu/packages/patches/wpa-supplicant-CVE-2015-5316.patch, gnu/packages/patches/wpa-supplicant-CVE-2016-4476.patch, gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt1.patch, gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt2.patch, gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt3.patch, gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt4.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. Signed-off-by: Leo Famulari <leo@famulari.name>
* | Merge branch 'master' into core-updatesLeo Famulari2016-10-05
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| * gnu: Add sunxi-tools.Danny Milosavljevic2016-10-05
| | | | | | | | | | | | * gnu/packages/admin.scm (sunxi-tools): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| * gnu: pies: Update to 1.3.Ludovic Courtès2016-10-04
| | | | | | | | | | * gnu/packages/admin.scm (pies): Update to 1.3. [arguments]: New field.
| * gnu: direvent: Update to 5.1.Ludovic Courtès2016-10-04
| | | | | | | | | | | | * gnu/packages/admin.scm (direvent): Update to 5.1. [arguments]: Augment 'patch-/bin/sh' phase to patch 'progman.c' and 'testsuite'.
* | Merge branch 'master' into core-updatesLudovic Courtès2016-09-30
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| * gnu: isc-dhcp: Update bundled bind to 9.9.9-P3 [fixes CVE-2016-2776].Leo Famulari2016-09-27
| | | | | | | | * gnu/packages/admin.scm (isc-dhcp)[inputs]: Update bundled bind to 9.9.9-P3.
| * gnu: Add pam-krb5John Darrington2016-09-25
| | | | | | | | * gnu/packages/admin.scm (pam-krb5): New variable.
| * doc: "filesystem" -> "file system"John Darrington2016-09-16
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * doc/guix.texi: "filesystem" -> "file system" * gnu/packages/admin.scm: "filesystem" -> "file system" * gnu/packages/cdrom.scm: "filesystem" -> "file system" * gnu/packages/compression.scm: "filesystem" -> "file system" * gnu/packages/disk.scm: "filesystem" -> "file system" * gnu/packages/gnome.scm: "filesystem" -> "file system" * gnu/packages/irc.scm: "filesystem" -> "file system" * gnu/packages/linux.scm: "filesystem" -> "file system" * gnu/packages/mail.scm: "filesystem" -> "file system" * gnu/packages/mpd.scm: "filesystem" -> "file system" * gnu/packages/ocaml.scm: "filesystem" -> "file system" * gnu/packages/perl.scm: "filesystem" -> "file system" * gnu/packages/python.scm: "filesystem" -> "file system" * gnu/packages/search.scm: "filesystem" -> "file system" * gnu/packages/tls.scm: "filesystem" -> "file system" * gnu/services/mail.scm: "filesystem" -> "file system"
| * gnu: inetutils: Use /var as the localstatedir.Ludovic Courtès2016-09-07
| | | | | | | | * gnu/packages/admin.scm (inetutils)[arguments]: Add #:configure-flags.
| * gnu: rottlog: Adjust the default 'weekly' config.Ludovic Courtès2016-09-07
| | | | | | | | | | * gnu/packages/admin.scm (rottlog)[arguments]: Add 'tweak-rc-weekly' phase.
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