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* gnu: Move Java compression packages to new module.Ricardo Wurmus2019-01-12
| | | | | | | | | | * gnu/packages/compression.scm (bitshuffle-for-snappy): Export variable. (java-snappy, java-snappy-1, java-iq80-snappy, java-jbzip2, java-tukaani-xz): Move these variables from here... * gnu/packages/java-compression.scm: ...to this new file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * gnu/packages/java.scm, gnu/packages/bioinformatics.scm: Adjust module references.
* tests: Nitpick on Docker test.Ludovic Courtès2019-01-11
| | | | | | | This is a followup to 7d8a4eeacc534c8742e0b22d855aa73e5ab66b7f. * gnu/local.mk (GNU_SYSTEM_MODULES): Add gnu/tests/docker.scm. * gnu/tests/docker.scm: Update copyright line.
* services: Add docker.Danny Milosavljevic2019-01-10
| | | | | | * gnu/services/docker.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * doc/guix.texi (Miscellaneous Services): Document the service.
* gnu: Add docker.Danny Milosavljevic2019-01-10
| | | | | | | * gnu/packages/docker.scm (docker): New variable. * gnu/packages/patches/docker-engine-test-noinstall.patch: New file. * gnu/packages/patches/docker-fix-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add them.
* gnu: aria2: Fix CVE-2019-3500.Leo Famulari2019-01-09
| | | | | | * gnu/packages/patches/aria2-CVE-2019-3500.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/bittorrent.scm (aria2)[source]: Use it.
* gnu: biber: Update to 2.12.Jelle Licht2019-01-07
| | | | | | | | * gnu/packages/tex.scm (biber): Update to 2.12. [source]: Use 'git-fetch'. Add patch. [inputs]: Add perl-file-slurper. Remove perl-file-slurp. * gnu/packages/patches/biber-fix-encoding-write.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* gnu: Add jose.Manolis Ragkousis2019-01-07
| | | | | * gnu/packages/jose.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu: libarchive: Replace with libarchive 3.3.3 and fix ↵Alex Vong2019-01-07
| | | | | | | | | | | | CVE-2018-{1000877,1000878,1000880}. * gnu/packages/backup.scm (libarchive)[source, home-page]: Use HTTPS. [replacement]: New field. (libarchive-3.3.3): New variable. * gnu/packages/patches/libarchive-CVE-2018-1000877.patch, gnu/packages/patches/libarchive-CVE-2018-1000878.patch, gnu/packages/patches/libarchive-CVE-2018-1000880.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them.
* hydra: Move job definitions to (gnu ci).Ludovic Courtès2019-01-06
| | | | | | * build-aux/hydra/gnu-system.scm: Move code to... * gnu/ci.scm: ... here. New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu: unrtf: Update to 0.21.10.Efraim Flashner2019-01-06
| | | | | | | | * gnu/packages/unrtf.scm (unrtf): Update to 0.21.10. [source]: Remove patch, remove snippet. [license]: Update to gpl3+. * gnu/packages/patches/unrtf-CVE-2016-10091.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: streamlink: Fix build.Efraim Flashner2019-01-05
| | | | | | * gnu/packages/video.scm (streamlink)[source]: Add patch. * gnu/packages/patches/streamlink-update-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
* gnu: kpackage: Transfer patches from NixOS.Hartmut Goebel2019-01-04
| | | | | | | | | | | | | | Transfer the NixOS patches for kpackage as of 2018-02-17: - Allow external paths. - Make QDirIterator follow symlinks. Decided to use a patch for one of the "allow external paths" changes since 'substitute*' seems not to be robust enough. * gnu/packages/patches/kpackage-allow-external-paths.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/kde-frameworks.scm(kpackage)[source]: Use it. <patch>: New phase.
* gnu: kinit: Use LIBRARY_PATH to search for dynamically loaded libs.Hartmut Goebel2019-01-04
| | | | | | | | | Transfer the NixOS "kdeinit-libpath" patch for kinit as of 2018-02-17. * gnu/packages/patches/kinit-kdeinit-libpath.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/kde-frameworks.scm (kinit)[source]: Use it.
* gnu: kinit: Use the store paths for dynamically loaded libs.Hartmut Goebel2019-01-04
| | | | | | | | | | | Transfer the NixOS "kdeinit-extra_libs" patch for kinit as of 2018-02-17. * gnu/packages/patches/kinit-kdeinit-extra_libs.patch: New filee. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/kde-frameworks.scm (kinit)[source]: Use it. <patch-paths>: New phase. [inputs]: Add kparts, plasma-framework.
* gnu: kio: Search 'smbd' on $PATH.Hartmut Goebel2019-01-04
| | | | | | | | Transfer the remaining NixOS patch for kio as of 2018-02-17. * gnu/packages/patches/kio-search-smbd-on-PATH.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/kde-frameworks.scm(kio)<source>: Use it.
* gnu: libextractor: Fix CVE-2018-{20430,20431}.Alex Vong2019-01-04
| | | | | | | * gnu/packages/patches/libextractor-CVE-2018-20430.patch, gnu/packages/patches/libextractor-CVE-2018-20431.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/gnunet.scm (libextractor)[source]: Use them.
* gnu: vboot-utils: Fix building on armhf-linux.Kei Kebreau2019-01-03
| | | | | | | | | * gnu/packages/bootloaders.scm (vboot-utils)[source]: Add patches. [arguments]: Conditionally add "HOST_ARCH=arm" to #:make-flags. * gnu/packages/patches/vboot-utils-fix-format-load-address.patch, gnu/packages/patches/vboot-utils-fix-tests-show-contents.patch, gnu/packages/patches/vboot-utils-skip-test-workbuf.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them.
* gnu: gnucash: Fix test failure.Maxim Cournoyer2019-01-02
| | | | | | | | Fixes issue #32057 (see: https://issues.guix.info/issue/32057). * gnu/packages/patches/gnucash-fix-test-transaction-failure.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/gnucash.scm (gnucash): Use it.
* gnu: vinagre: Update package for newer freerdp.Efraim Flashner2018-12-30
| | | | | | | | | | | * gnu/packages/gnome.scm (vinagre)[source]: Update patches. [arguments]: Add custom phase to replace 'freerdp' with 'freerdp2'. Remove configure flags. * gnu/packages/patches/vinagre-revert-1.patch, gnu/packages/patches/vinagre-revert-2.patch: Remove files. * gnu/packages/patches/vinagre-newer-freerdp.patch, gnu/packages/patches/vinagre-newer-rdp-parameters.patch: New files. * gnu/local.mk (dist_patch_DATA): Register changes.
* gnu: file: Fix CVE-2018-10360.Efraim Flashner2018-12-24
| | | | | | | | | * gnu/packages/patches/file-CVE-2018-10360.patch: New file. * gnu/packages/file.scm (file)[replacement]: New field. (file/fixed): New variable. * gnu/packages/commencement.scm (file-boot0): Use 'package/inherit' to receive security fixes. * gnu/local.mk (dist_patch_DATA): Register it.
* gnu: Remove conkeror.Ludovic Courtès2018-12-23
| | | | | | * gnu/packages/conkeror.scm: Remove. * gnu/local.mk (GNU_SYSTEM_MODULES): Remove it. * gnu/packages/gnuzilla.scm (conkeror): New variable.
* gnu: datamash: Update to 1.4.Efraim Flashner2018-12-23
| | | | | | | * gnu/packages/datamash.scm (datamash): Update to 1.4. [source]: Remove patch. * gnu/packages/patches/datamash-arm-tests.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: Add emacs-wordnut.Mathieu Othacehe2018-12-21
| | | | | | * gnu/packages/patches/emacs-wordnut-require-adaptive-wrap.patch: New file. * gnu/local.mk (dist_patch_DATA): Add previous file. * gnu/packages/emacs.scm (emacs-wordnut): New package.
* gnu: meandmyshadow: Update to 10.5a.Kei Kebreau2018-12-20
| | | | | | | * gnu/packages/games.scm (meandmyshadow): Update to 10.5a. [source]: Remove patch. * gnu/local.mk (dist_patch_DATA): Unregister patch. * gnu/packages/patches/meandmyshadow-define-paths-earlier.patch: Delete file.
* gnu: stumpwm: Fix gnew command.Pierre Langlois2018-12-19
| | | | | | | | | | | The new release of StumpWM broken the interactive 'gnew' command. It was fixed upstream [0] and will be part of the next release. 0: https://github.com/stumpwm/stumpwm/pull/538 * gnu/packages/patches/stumpwm-fix-broken-read-one-line.patch: New file. * gnu/packages/lisp.scm (stumpwm)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Register it.
* gnu: ansible: Work around issues with Guix wrapper scripts.Arun Isaac2018-12-18
| | | | | | | | * gnu/packages/admin.scm (ansible)[source]: Remove ansible-wrap-program-hack.patch from patches. [arguments]: Add hide-wrapping and fix-symlinks phases. * gnu/packages/patches/ansible-wrap-program-hack.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Unregister it.
* gnu: glibc: Add patch implementing "pid/…" magic lookup on the Hurd.Ludovic Courtès2018-12-16
| | | | | | | | | | | | | | | | This patch is missing from glibc 2.28 and is needed to support /proc/self lookup when using the Hurd's procfs, which in turn is needed for our 'guile-relocatable.patch'. See <https://lists.gnu.org/archive/html/bug-hurd/2018-12/msg00024.html>. * gnu/packages/patches/glibc-hurd-magic-pid.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/base.scm (glibc)[arguments]: Add 'apply-hurd-patch' phase. [native-inputs]: Add "hurd-magic-pid-patch" input. * gnu/packages/cross-base.scm (cross-libc)[arguments]: Duplicate 'apply-hurd-patch' phase.
* gnu: qemu: Update to 3.1.0.Rutger Helling2018-12-13
| | | | | | | | * gnu/packages/virtualization.scm (qemu): Update to 3.1.0. [source]: Remove obsolete patches. * gnu/packages/patches/qemu-CVE-2018-16847.patch, gnu/packages/patches/qemu-CVE-2018-16867.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
* gnu: Borg: Update to 1.1.8.Leo Famulari2018-12-10
| | | | | | | * gnu/packages/backup.scm (borg): Update to 1.1.8. [source]: Remove obsolete patch. * gnu/packages/patches/borg-respect-storage-quota.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: openjdk: Make idlj respect SOURCE_DATE_EPOCH.Gábor Boskovits2018-12-09
| | | | | | * gnu/packages/patches/openjdk-10-idlj-reproducibility.patch: New file. * gnu/packages/java.scm (openjdk10)[source]: Use it. * gnu/locale.mk (dist_patch_DATA): Register it.
* gnu: polkit: Fix CVE-2018-19788.Leo Famulari2018-12-09
| | | | | | * gnu/packages/patches/polkit-CVE-2018-19788.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/polkit.scm (polkit)[source]: Use it.
* gnu: Add liblcf.宋文武2018-12-09
| | | | | * gnu/packages/easyrpg.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu: GCC@6: Update to 6.5.0.Marius Bakke2018-12-08
| | | | | | | | * gnu/packages/patches/gcc-libsanitizer-fix.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/gcc.scm (gcc-6): Update to 6.5.0. [source](patches): Drop obsolete patches. [source](snippet): Remove.
* Merge branch 'version-0.16.0'Ludovic Courtès2018-12-07
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| * gnu: quilt: Use shorter file names for patches.Ludovic Courtès2018-12-05
| | | | | | | | | | | | | | | | | | | | | | | | | | We were reaching the 99-character limit of POSIX tar. * gnu/packages/patches/quilt-compat-getopt-fix-option-with-nondigit-param.patch: Rename to... * gnu/packages/patches/quilt-getopt-nondigit-param.patch: ... this. * gnu/packages/patches/quilt-compat-getopt-fix-second-separator.patch: Rename to... * gnu/packages/patches/quilt-getopt-second-separator.patch: ... this. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/patchutils.scm (quilt)[source](patches): Likewise.
* | gnu: QEMU: Fix CVE-2018-16847 and CVE-2018-16867.Leo Famulari2018-12-06
| | | | | | | | | | | | | | * gnu/packages/patches/qemu-CVE-2018-16847.patch, gnu/packages/patches/qemu-CVE-2018-16867.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/virtualization.scm (qemu)[source]: Use them.
* | gnu: elogind: Update to 239.2.Stefan Stefanović2018-12-06
|/ | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/freedesktop.scm (elogind): Update to 239.2. [source](patches): Remove elogind-glibc-2.27.patch. [source](snippet): Remove snippet. [arguments]: <#:tests?>: Enable tests. <#:configure-flags>: Adjust build paths. Disable some tests. <#:make-flags>: Remove argument. <#:phases>[patch-locale-header]: Remove phase. <#:phases>[clean-runpath]: Add phase. <#:phases>[bootstrap]: Remove phase. <#:phases>[fix-pkttyagent-path]: Add phase. <#:phases>[fix-service-file]: Remove phase. <#:phases>[add-libcap-to-search-path]: Remove phase. <#:phases>[remove-uaccess-tag]: Remove phase. <#:phases>[change-pid-file-path]: Add phase. [build-system]: Switch to meson-build-system. [native-inputs]: Sort native-inputs list. Remove gperf package version constraint. Remove: autoconf, automake, libtool, intltool. Add: docbook-xml-4.2. [inputs]: Remove: linux-libre-headers. * gnu/packages/patches/elogind-glibc-2.27.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove patch file. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: Beets: Fix compatibility with Python 3.7.Leo Famulari2018-12-03
| | | | | | * gnu/packages/patches/beets-python-3.7-fix.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/music.scm (beets)[source]: Use it.
* Merge branch 'core-updates'Ludovic Courtès2018-12-03
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| * gnu: blender: Use newer ffmpeg.Efraim Flashner2018-11-30
| | | | | | | | | | | | | | | | * gnu/packages/graphics.scm (blender)[source]: Add patch for newer ffmpeg compatability. [inputs]: Replace ffmpeg-2.8 with ffmpeg. * gnu/packages/patches/blender-newer-ffmpeg.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
| * Merge branch 'master' into core-updatesMarius Bakke2018-11-29
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| * | gnu: lirc: Build reproducibly.Ludovic Courtès2018-11-29
| | | | | | | | | | | | | | | | | | * gnu/packages/patches/lirc-reproducible-build.patch: New file. * gnu/packages/lirc.scm (lirc)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
| * | gnu: rust: Shorten patch file name.Ludovic Courtès2018-11-29
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This file name was too long to fit in a tar archive. * gnu/packages/patches/rust-mdbook-support-reproducible-builds-by-forcing-window.search.patch: Rename to... * gnu/packages/patches/rust-reproducible-builds.patch: ... this. * gnu/packages/rust.scm (rust-1.27, rust): Adjust accordingly. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
| * | gnu: mono: Make build reproducible.Danny Milosavljevic2018-11-27
| | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/mono-mdoc-timestamping.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/mono.scm (mono)[source]: Use patch. [arguments]<#:phases>[make-reproducible]: New phase. <#:phases>[set-env]: Set SOURCE_DATE_EPOCH.
| * | gnu: aegisub: Fix build.Björn Höfling2018-11-25
| | | | | | | | | | | | | | | | | | * gnu/packages/patches/aegisub-boost68.patch: New file * gnu/local.mk: Add it. * gnu/packages/video.scm (aegisub)[source]: Use patch.
| * | gnu: randomjungle: Do not build static binaries.Marius Bakke2018-11-25
| | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/randomjungle-disable-static-build.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/machine-learning.scm (randomjungle)[source](patches): Add it. [arguments]: Add "--disable-static" to #:configure-flags.
| * | Merge branch 'master' into core-updatesMarius Bakke2018-11-24
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| * \ \ Merge branch 'master' into core-updatesMarius Bakke2018-11-24
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| * | | | gnu: podofo: Add patch to fix build.Ricardo Wurmus2018-11-22
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/podofo-cmake-3.12.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/pdf.scm (podofo)[source]: Add patch.
| * | | | gnu: python-scikit-learn: Update to 0.20.1.Marius Bakke2018-11-22
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/python-scikit-learn-fix-test-non-determinism.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/machine-learning.scm (python-scikit-learn): Update to 0.20.1. [source](patches): Remove. [arguments]: Skip network tests with pytest instead of deleting files. Make sure $HOME is writable. (python2-scikit-learn): Rewrite in terms of PACKAGE-WITH-PYTHON2.
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