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* gnu: python-dendropy: Update to 4.4.0.Ben Woodcroft2018-07-29
| | | | | | | | | | | * gnu/packages/bioinformatics.scm (python-dendropy, python2-dendropy): Update to 4.4.0. [source]: Use GitHub URI. Remove patch. [properties]: Remove field. (python2-dendropy)[arguments]: Run tests with setup.py. [native-inputs]: Remove 'python2-nose. * gnu/packages/patches/python-dendropy-fix-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Delete it.
* gnu: x265: Fix compilation on ARMv7.Ludovic Courtès2018-07-28
| | | | | | * gnu/packages/patches/x265-arm-asm-primitives.patch: New file. * gnu/packages/video.scm (x265)[sources](patches): Add it. * gnu/local.mk (dist_patch_DATA): Add it.
* gnu: mariadb: Work around GCC ICE on armhf-linux.Ludovic Courtès2018-07-28
| | | | | | | * gnu/packages/patches/mariadb-gcc-ice.patch: New file. * gnu/packages/databases.scm (mariadb)[arguments]: Conditionally add 'apply-patch' phase. [native-inputs]: Conditionally add "gcc-ice-patch" input.
* Merge remote-tracking branch 'origin/master' into qt-updatesEfraim Flashner2018-07-25
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| * gnu: syncthing: Update to 0.14.49.Leo Famulari2018-07-24
| | | | | | | | | | | | | | | | * gnu/packages/syncthing.scm (syncthing): Update to 0.14.49. [source]: Remove obsolete patch. [inputs]: Remove go-github-com-kardianos-osext. * gnu/packages/patches/syncthing-fix-crash.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
| * gnu: xorg-server: Apply patch to fix screen rotation on KMS.Ludovic Courtès2018-07-24
| | | | | | | | | | | | | | | | Fixes <https://bugs.freedesktop.org/show_bug.cgi?id=106715>. * gnu/packages/patches/xorg-server-rotate-fb.patch: New file. * gnu/packages/xorg.scm (xorg-server)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
| * gnu: sddm: Update to 0.18.0.Stefan Stefanović2018-07-22
| | | | | | | | | | | | | | | | * gnu/packages/display-managers.scm (sddm): Update to 0.18.0. * gnu/packages/patches/sddm-fix-build-with-qt-5.11-1024.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
| * gnu: openbabel: Fix crash when opening NWChem output files.Kei Kebreau2018-07-21
| | | | | | | | | | | | * gnu/packages/patches/openbabel-fix-crash-on-nwchem-output.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/chemistry.scm (openbabel)[source]: Use it.
| * gnu: ghostscript: Fix CVE-2018-10194.Leo Famulari2018-07-17
| | | | | | | | | | | | | | * gnu/packages/ghostscript.scm (ghostscript)[replacement]: New field. (ghostscript/fixed): New variable. * gnu/packages/patches/ghostscript-CVE-2018-10194.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
| * gnu: Add stb-image.Marius Bakke2018-07-18
| | | | | | | | | | * gnu/packages/stb.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Register it.
| * gnu: twinkle: Add missing headersJovany Leandro G.C2018-07-17
| | | | | | | | | | | | | | | | | | * gnu/packages/patches/twinkle-include-qregexpvalidator-explicity.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/telephony.scm (twinkle)[source]: Use it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| * gnu: python-cairocffi: Fix loading of shared libraries.Danny Milosavljevic2018-07-16
| | | | | | | | | | | | | | | | | | | | | | Fixes <https://bugs.gnu.org/32170>. * gnu/packages/patches/python-cairocffi-dlopen-path.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python.scm (python-cairocffi)[inputs]: Add glib, gtk+, pango. [native-inputs]: Add python-pytest. [arguments]: Enable tests. [arguments]<#:phases>[patch-paths]: New phase.
| * gnu: Remove leftover patch.Leo Famulari2018-07-16
| | | | | | | | | | * gnu/packages/patches/file-CVE-2017-1000249.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.patch'.
| * gnu: monero: Update to 0.12.3.0.Theodoros Foradis2018-07-16
| | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/monero-use-system-miniupnpc.patch: New file. * gnu/local.mk: Add it. * gnu/packages/finance.scm (monero): Update to 0.12.3.0. [source]: Add patch. Remove snippet because miniupnpc, rapidjson and unbound are no longer bundled in-tree. [inputs]: Add zeromq, cppzmq, libsodium. Use monero-miniupnpc. [arguments]: Change build-type to "release". Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| * gnu: fltk: Update to 1.3.4-2.Efraim Flashner2018-07-16
| | | | | | | | | | | | | | | | | | * gnu/packages/fltk.scm (fltk): Update to 1.3.4-2. [source]: Remove patches. [inputs]: Switch from libjpeg-8 to libjpeg. * gnu/packages/patches/fltk-shared-lib-defines.patch, gnu/packages/patches/fltk-xfont-on-demand.patch: Remove files. * gnu/local.mk (dist_patch_DATA): Remove them.
* | Revert "gnu: quassel: Fix building with Qt 5.11."Efraim Flashner2018-07-25
| | | | | | | | | | | | This reverts commit 68ddfb2e8d43de248a64a9baf34ff7002053ede6. This is no longer necessary after the update to Qt-5.11.1.
* | Revert "gnu: sddm: Fix CMake build."Efraim Flashner2018-07-24
| | | | | | | | | | | | This reverts commit 8674abb1dda0278f81b5965985e6b78497aab386. This is no longer necessary after the upgrade to Qt-5.11.1.
* | gnu: python-pyqt: Don't use private sip file.Efraim Flashner2018-07-22
|/ | | | | | | | * gnu/packages/qt.scm (python-sip)[arguments]: Don't use '--sip-module' flag in custom 'configure phase. (python-pyqt)[sources]: Add patch. * gnu/packages/patches/pyqt-public-sip.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
* gnu: bind: Update to 9.12.2.Julien Lepiller2018-07-13
| | | | | | * gnu/packages/dns.scm (bind): Update to 9.12.2. * gnu/packages/patches/bind-CVE-2018-5738.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* Merge branch 'staging'Marius Bakke2018-07-13
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| * Merge branch 'master' into stagingMarius Bakke2018-07-08
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| * | gnu: xf86-video-savage: Fix FTBFS with xorg-server >= 1.20.Marius Bakke2018-07-08
| | | | | | | | | | | | | | | | | | * gnu/packages/patches/xf86-video-savage-xorg-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/xorg.scm (xf86-video-savage)[source](patches): Use it.
| * | gnu: xf86-video-sis: Fix FTBFS with xorg-server >= 1.20.Marius Bakke2018-07-08
| | | | | | | | | | | | | | | | | | * gnu/packages/patches/xf86-video-sis-xorg-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/xorg.scm (xf86-video-sis)[source](patches): Use it.
| * | Merge branch 'master' into stagingMarius Bakke2018-07-02
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| * | | Revert "gnu: gnu: Make alsa find its plugins by setting ALSA_PLUGIN_DIR."宋文武2018-06-26
| | | | | | | | | | | | | | | | | | | | | | | | | | | | This reverts commit 2101cc3fb691f443b830fdf5f846ded5fa018739. With commit 1e3861eb, we can do it without ALSA_PLUGIN_DIR. See <https://bugs.gnu.org/31934> for details.
| * | | Merge branch 'master' into stagingMarius Bakke2018-06-26
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| * | | | gnu: jamvm@1.5.1: Fix building on armhf-linux.Efraim Flashner2018-06-26
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/java.scm (jamvm@1.5.1)[source]: Add patch. * gnu/packages/patches/jamvm-arm.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
| * | | | Merge branch 'master' into stagingMarius Bakke2018-06-21
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| * | | | | gnu: openblas: Fix build on i686.Marius Bakke2018-06-20
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/openblas-fix-tests-i686.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/maths.scm (openblas)[native-inputs]: Add it. [arguments]: Add phase to apply it on i686 systems only.
| * | | | | Merge branch 'master' into stagingMarius Bakke2018-06-19
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| * \ \ \ \ \ Merge branch 'master' into stagingMarius Bakke2018-06-18
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| * | | | | | | gnu: zathura-pdf-mupdf: Link to JPEG libraries.Tobias Geerinckx-Rice2018-06-18
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/pdf.scm (zathura-pdf-mupdf)[source]: Add patch. * gnu/packages/patches/zathura-pdf-mupdf-link-to-jpeg-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
| * | | | | | | Merge branch 'master' into stagingMarius Bakke2018-06-11
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| * | | | | | | | gnu: mesa: Update to 18.0.4.Rutger Helling2018-05-22
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/gl.scm (mesa): Update to 18.0.4. [source]: Remove mesa-wayland-egl-symbols-check-mips.patch. [arguments]: Remove wayland from --with-platforms configure flag. * gnu/local.mk: Remove mesa-wayland-egl-symbols-check-mips.patch. * gnu/packages/patches/mesa-wayland-egl-symbols-check-mips.patch: Remove file.
* | | | | | | | | gnu: xapian: Fix notmuch test failure.Marius Bakke2018-07-13
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/xapian-revert-5489fb2f8.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/search.scm (xapian)[source](patches): Use it.
* | | | | | | | | gnu: Syncthing: Fix a crash bug.Leo Famulari2018-07-12
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/syncthing-fix-crash.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/syncthing.scm (syncthing)[source]: Use it.
* | | | | | | | | build: Add missing patches to the distribution.Ludovic Courtès2018-07-11
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Reported by jonsger. * gnu/local.mk (dist_patch_DATA): Add perl-text-markdown-discount-unbundle.patch and racket-fix-xform-issue.patch.
* | | | | | | | | gnu: Add patches.Danny Milosavljevic2018-07-10
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/local.mk (dist_patch_DATA): Add 'rust-bootstrap-stage0-test.patch', 'rust-coresimd-doctest.patch'.
* | | | | | | | | gnu: openscenegraph: Update to 3.6.2.Alex Kost2018-07-09
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/graphics.scm (openscenegraph): Update to 3.6.2. [source]: Use the new url and 'git-fetch' method. [properties]: Add 'upstream-name'. [native-inputs]: Add 'pkg-config'. [inputs]: Add 'libxrandr'. * gnu/packages/patches/openscenegraph-ffmpeg3.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
* | | | | | | | | services: Add prometheus-node-exporter-service-type.Gábor Boskovits2018-07-09
| |_|_|_|_|_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/services/monitoring.scm (prometheus-node-exporter-service-type): New variable. (<prometheus-node-exporter-configuration>): New record type. (prometheus-node-exporter-shepherd-service): New procedure. * gnu/doc/guix.texi (Monitoring Services): Document it. * gnu/tests/monitoring.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add test module.
* | | | | | | | gnu: libgit2: Update to 0.26.4 [fixes CVE-2018-11235].Leo Famulari2018-07-02
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/version-control.scm (libgit2): Update to 0.26.4. (source): Adjust patch name. * gnu/packages/patches/libgit2-0.25.1-mtime-0.patch: Rename to ... * gnu/packages/patches/libgit2-mtime-0.patch: ... this. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* | | | | | | | gnu: icedtea: Work around gcc segfault.Gábor Boskovits2018-07-03
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/java.scm (icedtea-7)[native-inputs]: Add patch to hotspot. * gnu/packages/patches/icedtea-7-hotspot-gcc-segfault-workaround.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* | | | | | | | gnu: zstd: Update to 1.3.5.Tobias Geerinckx-Rice2018-07-02
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/compression.scm (zstd): Update to 1.3.5. [source]: Add two patches to make the test suite pass. * gnu/packages/patches/zstd-fix-stdin-list-without-tty.patch, gnu/packages/patches/zstd-fix-stdin-list-test.patch: New files. * gnu/local.mk (dist_patch_DATA): Add both.
* | | | | | | | gnu: icedtea: Work around gcc segfault.Gábor Boskovits2018-07-02
| |_|_|_|_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/java.scm (icedtea-6)[arguments]: Modify phases to extract hostspot, as after the patching it becomes an archive. [native-inputs]: add patch to hotspot-src. * gnu/packages/patches/icedtea-6-hotspot-gcc-segfault-workaround.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* | | | | | | gnu: emacs-browse-at-remote: Update to 0.10.0.Oleg Pykhalov2018-07-01
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/emacs.scm (emacs-browse-at-remote): Update to 0.10.0. * gnu/packages/patches/emacs-browse-at-remote-cgit-gnu.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* | | | | | | gnu: qtoctave: Fix build for Qt 5.11.Kei Kebreau2018-06-30
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/maths.scm (qtoctave)[source]: Add patch. [native-inputs]: Add texlive. * gnu/packages/patches/qtoctave-qt-5.11-fix.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* | | | | | | gnu: icecat: Add more fixes from upstream mozilla-esr52.Mark H Weaver2018-06-27
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Includes fixes for CVE-2018-12363, CVE-2018-12364, CVE-2018-12366, the remaining 1 out of 2 changesets for CVE-2018-5156, and the remaining 7 out of 17 changesets for CVE-2018-5188. * gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from the upstream mozilla-esr52 repository. * gnu/packages/patches/icecat-bug-1413868-pt1.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* | | | | | | gnu: Add beignet.Fis Trivial2018-06-26
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/opencl.scm (beignet): New variable. * gnu/packages/patches/beignet-correct-file-names.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* | | | | | | gnu: libtiff: Fix CVE-2018-{8905,10963}.Leo Famulari2018-06-26
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/libtiff-CVE-2018-8905.patch, gnu/packages/patches/libtiff-CVE-2018-10963.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/image.scm (libtiff)[replacement]: New field. (libtiff/fixed): New variable.
* | | | | | | gnu: Add gcc@8.Marius Bakke2018-06-26
| |_|_|_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/gcc-8-strmov-store-file-names.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/gcc.scm (gcc-8): New public variable.
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