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* gnu: lrcalc: Update to 2.1.vicvbcun2022-08-12
| | | | | | | | | * gnu/packages/algebra.scm (lrcalc): Update to 2.1. [source]: Remove patch. * gnu/packages/patches/lrcalc-includes.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Unregister file. Signed-off-by: Andreas Enge <andreas@enge.fr>
* gnu: lcalc: Update to 2.0.5.vicvbcun2022-08-12
| | | | | | | | | | | * gnu/packages/sagemath.scm (lcalc): Update to 2.0.5. * gnu/packages/patches/lcalc-default-parameters-1.patch, gnu/packages/patches/lcalc-default-parameters-2.patch, gnu/packages/patches/lcalc-lcommon-h.patch, gnu/packages/patches/lcalc-using-namespace-std.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Unregister files. Signed-off-by: Andreas Enge <andreas@enge.fr>
* gnu: qtwayland: Fix build with GCC 11.Marius Bakke2022-08-11
| | | | | | * gnu/packages/patches/qtwayland-gcc-11.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/qt.scm (qtwayland)[source](patches): New field.
* gnu: fuse@2: Prepare for newer glibc.Marius Bakke2022-08-11
| | | | | | | | * gnu/packages/patches/fuse-glibc-2.34.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/linux.scm (fuse)[source](patches): Add the patch. [arguments]: Add force-bootstrap phase. [native-inputs]: Add AUTOCONF, AUTOMAKE, GETTEXT-MINIMAL, and LIBTOOL.
* gnu: gnupg: Patch CVE-2022-34903.Efraim Flashner2022-08-09
| | | | | | | * gnu/packages/gnupg.scm (gnupg)[replacement]: New field. (gnupg/replacement): New variable. * gnu/packages/patches/gnupg-CVE-2022-34903.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
* gnu: aspell: Patch CVE-2019-25051.Efraim Flashner2022-08-09
| | | | | | * gnu/packages/aspell.scm (aspell)[source]: Add patch. * gnu/packages/patches/aspell-CVE-2019-25051.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
* gnu: unzip: Patch for CVE-2022-0529 and CVE-2022-0530.Efraim Flashner2022-08-08
| | | | | | | * gnu/packages/compression.scm (unzip)[replacement]: New field. (unzip/fixed): New variable. * gnu/packages/patches/unzip-CVE-2022-0529+CVE-2022-0530.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
* gnu: libtirpc: Fix CVE-2021-46828.Efraim Flashner2022-08-07
| | | | | | | | * gnu/packages/onc-rpc.scm (libtirpc)[replacement]: New field. (libtirpc/fixed): New variable. (libtirpc-hurd)[source]: Add patch. * gnu/packages/patches/libtirpc-CVE-2021-46828.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
* gnu: shishi: Update to 1.0.3.Efraim Flashner2022-08-07
| | | | | | | | * gnu/packages/kerberos.scm (shishi): Update to 1.0.3. [source]: Remove patch. [arguments]: Remove configure flag overriding libgcrypt detection. * gnu/packages/patches/shishi-fix-libgcrypt-detection.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: mumps: Update to 5.5.1FELŠÖCI Marek2022-08-05
| | | | | | | | | | * gnu/packages/maths.scm (mumps): Update to 5.5.1. Stop applying patches as the build configuration has been updated upstream. Allow for further optimized BLR compression by specifying the -DBLR_MT build option. * gnu/packages/patches/mumps-build-parallelism.patch: File removed. * gnu/packages/patches/mumps-shared-libseq.patch: File removed. * gnu/packages/patches/mumps-shared-mumps.patch: File removed. * gnu/packages/patches/mumps-shared-pord.patch: File removed. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: ruby-anystyle: Initialize dictionary files.Philip McGrath2022-08-04
| | | | | | | | | | | | | | | | | For the GDBM and Marshal dictionary adapters to be useful with their default settings, we must initialize their data files during the package build: upstream would initialize them lazily, but that doesn't work with an immutable installation directory (at least, not without more complex patches). Otherwise, we would always end up rebuilding the dictionary at startup, which is “slow” and “not recommended”. * gnu/packages/patches/ruby-anystyle-fix-dictionary-populate.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/ruby.scm (ruby-anystyle)[patches]: Use it. [arguments]<#:phases>: Add 'populate-dictionaries' phase. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: ruby-anystyle-data: Don't write to installed gem.Philip McGrath2022-08-04
| | | | | | | | | * gnu/packages/patches/ruby-anystyle-data-immutable-install.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/ruby.scm (ruby-anystyle-data)[patches]: Use it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add ruby-latex-decode.Philip McGrath2022-08-04
| | | | | | | | * gnu/packages/patches/ruby-latex-decode-fix-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/ruby.scm (ruby-latex-decode): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add aoflagger.Sharlatan Hellseher2022-08-04
| | | | | | | | | * gnu/packages/astronomy.scm (aoflagger): New variable. * gnu/packages/patches/aoflagger-use-system-provided-pybind11.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add barony.Timotej Lazar2022-08-04
| | | | | | | | * gnu/packages/games.scm (barony): New variable. * gnu/packages/patches/barony-fix-textures.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add neko.John Kehayias2022-08-03
| | | | | | | | * gnu/packages/haxe.scm: New module. (neko): New variable. * gnu/local.mk (GNU_SYSTEM_MODULES): Add new module. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
* gnu: nsis: Update to 3.08.Vivien Kraus2022-08-03
| | | | | | | | | * gnu/packages/patches/nsis-source-date-epoch.patch: Drop this patch. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/patches/nsis-env-passthru.patch: Adjust the patch. * gnu/packages/installers.scm (make-nsis): Update to 3.08. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
* gnu: Add fail2ban.muradm2022-08-01
| | | | | | | | | | | | | | * gnu/packages/admin.scm (fail2ban): New variable. * gnu/packages/patches/fail2ban-0.11.2_CVE-2021-32749.patch, gnu/packages/patches/fail2ban-0.11.2_fix-setuptools-drop-2to3.patch, gnu/packages/patches/fail2ban-0.11.2_fix-test-suite.patch, gnu/packages/patches/fail2ban-paths-guix-conf.patch, gnu/packages/patches/fail2ban-python310-server-action.patch, gnu/packages/patches/fail2ban-python310-server-actions.patch, gnu/packages/patches/fail2ban-python310-server-jails.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* gnu: jami: Apply upstream patch that fixes a usability issue.Maxim Cournoyer2022-07-31
| | | | | | * gnu/packages/patches/jami-fix-esc-bug.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/jami.scm (%jami-sources): Apply it.
* gnu: libjami: Update to 20220726.1515.da8d1da.Maxim Cournoyer2022-07-31
| | | | | | | | | | | | | | | | | | | * gnu/packages/patches/jami-fix-crash-on-quit.patch: Delete file. * gnu/packages/patches/jami-images-loading.patch: Likewise. * gnu/packages/patches/jami-libclient-audio-managers.patch: Likewise. * gnu/packages/patches/jami-memory-usage.patch: Likewise. * gnu/local.mk (dist_patch_DATA): De-register removed patches. * gnu/packages/jami.scm (%jami-version): Update to 20220726.1515.da8d1da. (libjami)[configure-flags]: Add '--disable-static'. (jami-apply-custom-patches): Adjust for top directory renaming. (%ffmpeg-default-configure-flags): Add muxer support for g726 and g726le. Add demuxer support for g723_1, g726 and g726le. Add encoder/decoder support for g726, g726le and g723_1. Add decoder support for g729. (ffmpeg-jami)[patches]: Add 'libopusenc-reload-packet-loss-at-encode'. (jami-libclient)[native-inputs]: New field. [inputs]: Add ffmpeg-jami and libxkbcommon. [propagated-inputs]: Replace qtbase-5 with qtbase.
* gnu: libphonenumber: Build reproducibly.Antero Mejr2022-07-27
| | | | | | | | | * gnu/packages/messaging.scm (libphonenumber): Add patch. * gnu/packages/patches/libphonenumber-reproducible-build.patch: New file. * gnu/local.mk (dist_patch_DATA): Register patch. Signed-off-by: Jonathan Brielmaier <jonathan.brielmaier@web.de>
* gnu: PHP: Fix test failure with newer cURL.Marius Bakke2022-07-23
| | | | | | * gnu/packages/patches/php-curl-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/php.scm (php)[source](patches): Add it.
* gnu: PHP: Update to 7.4.30.Marius Bakke2022-07-23
| | | | | | | * gnu/packages/php.scm (php): Update to 7.4.30. [source](patches): Remove obsolete patch. * gnu/packages/patches/php-openssl_x509_checkpurpose_basic.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu: eigen: Update to 3.4.0.vicvbcun2022-07-23
| | | | | | | | | | * gnu/packages/algebra.scm (eigen): Update to 3.4.0. * gnu/packages/patches/eigen-fix-strict-aliasing-bug.patch: New file. * gnu/packages/patches/eigen-remove-openmp-error-counting.patch, gnu/packages/patches/eigen-stabilise-sparseqr-test.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Update accordingly. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: libgeotiff: Update to 1.7.1.Felix Gruber2022-07-18
| | | | | | * gnu/packages/geo.scm (libgeotiff): Update to 1.7.1. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* services: docker: Fix race condition.Oleg Pykhalov2022-07-13
| | | | | | | | | | | | | Fixes <https://issues.guix.gnu.org/38432>. * gnu/packages/patches/containerd-create-pid-file.patch: New file. * gnu/local.mk (dist_patch_DATA): Add this. * gnu/packages/docker.scm (containerd)[source]: Add this patch. * gnu/services/docker.scm (containerd-shepherd-service): Add #:pid-file and #:pid-file-timeout. * gnu/services/docker.scm (docker-shepherd-service): Add --containerd flag. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: emacs-hyperbole: Update to 8.0.0.Nicolas Goaziou2022-07-13
| | | | | | | | * gnu/packages/emacs-xyz.scm (emacs-hyperbole): Update to 8.0.0. [arguments]<#:include>: Use %default-include. <#:phases>: Add build fix. * gnu/packages/patches/emacs-hyperbole-toggle-messaging.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Delete reference to removed file.
* gnu: pokerth: Fix build and modernize package.Maxim Cournoyer2022-07-12
| | | | | | | | | Fixes <https://issues.guix.gnu.org/51093>. * gnu/packages/games.scm (pokerth) [source]: Apply patch [inputs]: Use new style. [phases]: Delete trailing #t. Use gexps. {fix-paths}: Remove the gsasl and libircclient related substitutions.
* gnu: home: Add Guix channels service.Reily Siegel2022-07-12
| | | | | | | | * gnu/home/services/guix.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add guix.scm. * doc/guix.texi: Add documentation for home-channels-service. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: llvm-3.7, llvm-3.8: Fix build with gcc.Greg Hogan2022-07-12
| | | | | | | | | * gnu/packages/patches/clang-runtime-3.7-fix-build-with-python3.patch, gnu/packages/patches/llvm-3.x.1-fix-build-with-gcc.patch: New files. * gnu/packages/llvm.scm (clang-runtime-3.7, llvm-3.7, llvm-3.8): Use patches. * gnu/local.mk: Register patches. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: llvm-8: Fix build with gcc-10.Greg Hogan2022-07-12
| | | | | | | | | * gnu/packages/patches/llvm-8-fix-build-with-gcc-10.patch: New file. * gnu/packages/llvm.scm (clang-8, clang-runtime-8): Update to 8.0.1. * gnu/packages/llvm.scm (llvm-8): Use patch and update to 8.0.1. * gnu/local.mk: Register patch. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: xf86-video-mach64: Update to 6.9.7.Efraim Flashner2022-07-11
| | | | | | | | * gnu/packages/xorg.scm (xf86-video-mach64): Update to 6.9.7. [source]: Remove patches. * gnu/packages/patches/xf86-video-mach64-bool-to-boolean.patch, gnu/packages/patches/xf86-video-mach64-glibc-2.20.patch: Remove files. * gnu/local.mk (dist_patch_DATA): Remove them.
* gnu: mia: Build against VTK 9.Felix Gruber2022-07-07
| | | | | | | | | | * gnu/packages/image-processing.scm (mia): Build against VTK 9. [inputs]: Remove vtk-7; add vtk. [source]: Add mia-vtk9.patch. * gnu/packages/patches/mia-vtk9.patch: New file. * gnu/local.mk: Add it. Signed-off-by: Christopher Baines <mail@cbaines.net>
* gnu: pitivi: Update to 2022.06.0.Maxim Cournoyer2022-07-07
| | | | | | | | | * gnu/packages/patches/pitivi-fix-build-with-meson-0.60.patch: Delete file. * gnu/local.mk (dist_patch_DATA): De-register it. * gnu/packages/video.scm (pitivi): Update to 2022.06.0. [version]: Do not prefix with previous semver version. [inputs]{gst-plugins/selection}: Add comment about cvtracker. {python-librosa}: New input.
* gnu: tbb: Fix building on riscv64-linux.Efraim Flashner2022-07-04
| | | | | | * gnu/packages/tbb.scm (tbb)[source]: Add patch. * gnu/packages/patches/tbb-other-arches.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
* gnu: curl: Fix build on some systems.Efraim Flashner2022-07-03
| | | | | | | * gnu/packages/curl.scm (curl-7.84.0)[source]: Add patch to work around implicit function declaration. * gnu/packages/patches/curl-easy-lock.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
* gnu: mcrl2: Update to 202206.0.Jan (janneke) Nieuwenhuizen2022-07-01
| | | | | | | * gnu/packages/patches/mcrl2-fix-1687.patch, gnu/packages/patches/mcrl2-fix-counterexample.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/maths.scm (mcrl2): Update to 202206.0 and use them.
* gnu: docker: Update to 20.10.17.Pierre Langlois2022-06-23
| | | | | | | | | | | | | | | | | | | * gnu/packages/docker.scm (%docker-version): Update to 20.10.17. (docker-libnetwork)[source]: Update commit according to vendor.conf. Reset revision to 1. Simplify snippet. (docker)[origin]: Remove docker-fix-tests.patch. [arguments]: Adapt 'patch-paths phase, substitute "ip6tables" and buildkit-qemu. Remove trailing #t. [native-inputs]: Replace go-1.14 by go. (docker-cli)[source]: Update hash. [arguments]: Set GO_LINKMODE to "dynamic". Remove trailing #t. [phases]{check}: Replace 'if' with 'when'. * gnu/packages/networking.scm (go-sctp): Update commit according to docker-libnetwork's vendor.conf. * gnu/packages/patches/docker-fix-tests.patch: Delete. * gnu/local.mk (dist_patch_DATA): Remove patch. Co-authored-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: Add phoronix-test-suite.Maxim Cournoyer2022-06-22
| | | | | | | * gnu/packages/patches/phoronix-test-suite-fsdg.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/benchmark.scm (phoronix-test-suite): New variable. (gcc-toolchain*): Likewise.
* gnu: cmh: Add patch to work with current fplll.Andreas Enge2022-06-21
| | | | | | * gnu/packages/patches/cmh-support-fplll.patch: New file. * gnu/packages/algebra.scm (cmh)[source]: Add patch. * gnu/local.mk (dist_patch_DATA): Register patch.
* gnu: Add cctools.Philip McGrath2022-06-19
| | | | | | | | * gnu/packages/darwin.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * gnu/packages/darwin.scm (cctools): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* home: Add OpenSSH service.Ludovic Courtès2022-06-17
| | | | | | | * gnu/home/services/ssh.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * po/guix/POTFILES.in: Add it. * doc/guix.texi (Secure Shell): New section.
* gnu: public-inbox: Fixes to allow the testsuite to runThiago Jung Bauermann2022-06-17
| | | | | | | | | | | | | | | | | | | | | | | | This patch makes the public-inbox testsuite pass. Some tests are skipped, so the test coverage could likely be increased with more massaging. Perhaps the most significant change is using tini to run the testsuite so that the testsuite's sub-processes are reaped. The ‘check’ phase is based on the one from the mutter package. Thanks to Maxim Cournoyer for pointing out this solution. * gnu/packages/patches/public-inbox-fix-spawn-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add new patch. * gnu/packages/mail.scm (public-inbox)[source]: Add new patch. [arguments]<#:tests?>: Remove argument. <#:imported-modules>: Add argument. <#:modules>: Likewise. <#:phases>{qualify-paths}: Substitute path for ‘/bin/cp’. {pre-check}: Don't skip httpd-unix.t test. Remove unnecessary path substitutions for “env” and “/bin/sh”. {check}: Replace with custom version that launches the tests under tini. [native-inputs]: Add tini. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: rocm: Update to 5.1.3.John Kehayias2022-06-16
| | | | | | | | | | | | | | | | | | | | | | | | | All packages updated at the same time as they have a shared version. rocclr is no longer a stand-alone package, so the previous version is kept as rocclr-4 and the current version is just the source, rocclr-src, needed by rocm-opencl-runtime. * gnu/packages/patches/rocm-opencl-runtime-3.10.0-includes.patch, gnu/packages/patches/rocm-opencl-runtime-4.3-nocltrace.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. * gnu/packages/patches/rocm-comgr-3.1.0-dependencies.patch, gnu/packages/patches/rocm-opencl-runtime-4.3-noclinfo.patch, gnu/packages/patches/rocm-opencl-runtime-4.3-noopencl.patch: Update patches. * gnu/packages/rocm.scm (rocm-cmake, rocm-device-libs, rocm-comgr, roct-thunk-interface, rocr-runtime, rocm-opencl-runtime, rocminfo, rocm-bandwidth-test): Update to 5.1.3. (roct-thunk-interface)[inputs]: Add libdrm. [native-inputs]: Add gcc:lib and pkg-config. (rocclr-src): New variable. (rocclr-4): New variable (previous version of the package). (rocm-opencl-runtime)[source]: Remove obsolete patches. [arguments]: Rewrite with gexps. Add needed #:configure-flags. [inputs]: Remove rocclr, add numactl. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Update llvm-for-rocm: Update to 5.1.3.John Kehayias2022-06-16
| | | | | | | | | | | * gnu/packages/llvm.scm (llvm-for-rocm): Update to 5.1.3, now based on llvm-14. [source]{patches}: Remove unneeded patches (add_Object and add_libraries) and add new one (linkdl). * gnu/packages/patches/llvm-roc-3.0.0-add_libraries.patch, gnu/packages/patches/llvm-roc-4.2.0-add_Object.patch: Delete files. * gnu/packages/patches/llvm-roc-5.0.0-linkdl.patch: New file. * gnu/local.mk (dist_patch_DATA): Update to match current patches. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add python-zeep.Vinicius Monego2022-06-16
| | | | | | | | * gnu/packages/python-web.scm (python-zeep): New variable. * gnu/packages/patches/python-zeep-Fix-pytest_httpx-test-cases.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Co-authored-by: Hartmut Goebel <h.goebel@crazy-compilers.com>
* gnu: Add kismet.Petr Hodina2022-06-15
| | | | | | | | * gnu/packages/networking.scm (kismet): New variable. * gnu/local.mk: Add patch. * gnu/packages/patches/kismet-unbundle-boost.patch: New file. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* gnu: TimescaleDB: Update to 2.7.0.Marius Bakke2022-06-14
| | | | | | | | * gnu/packages/databases.scm (timescaledb): Update to 2.7.0. [source](snippet): Remove more files. [source](patches): New field. * gnu/packages/patches/timescaledb-flaky-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu: java-commons-lang3: Update to 3.12.0Artyom V. Poptsov2022-06-13
| | | | | | | | * gnu/packages/java.scm (java-commons-lang3): Update to 3.12.0. * gnu/packages/patches/java-commons-lang-fix-dependency.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Julien Lepiller <julien@lepiller.eu>
* gnu: fplll: Update to 5.4.2.Andreas Enge2022-06-13
| | | | | | | | * gnu/packages/algebra.scm (fplll): Update to 5.4.2. [source]: Remove patch; for unknown reasons the package now compiles without it. * gnu/packages/patches/fplll-std-fenv.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Unregister patch.
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