| Commit message (Collapse) | Author | Age |
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* gnu/bootloader/grub.scm (make-grub-efi-bootloader): Add procedure.
(install-grub-efi, install-grub-efi32): Remove variables.
(install-grub-efi-removable): Deprecate variable.
Change-Id: Ie10b506bb1088179d459ddafe3229fd730ac45aa
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/mpi.scm (openmpi-5): Update to 5.0.6.
Change-Id: I1aed5f0e76d64a215c4a13f445628ec206e31acf
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* gnu/packages/linux.scm (rdma-core): Update to 54.0.
Change-Id: I7f10ec57a1cad585abb08bdc30bd9e2aaafe7624
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* gnu/packages/fabric-management.scm (ucx): Update to 1.17.0.
* gnu/packages/patches/ucx-tcp-iface-ioctl.patch: Rebase.
Change-Id: I2089de93da88f4f81c4b233eb03abae1f41dfe7f
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This reverts commit 7c36577cdec8185ea7df608eb9a68424e19ee9cb, which
broke unit tests running in the chroot build environment.
For instance, tests of ‘hdf5-parallel-openmpi’ would fail with:
Testing ../../src/h5diff/ph5diff -c 1_vds.h5 2_vds.h5 *FAILED*
====Expected result (expect_sorted) differs from actual result (actual_sorted)
*** expect_sorted 2024-12-01 16:41:03.795879595 +0000
--- actual_sorted 2024-12-01 16:41:03.791879542 +0000
***************
*** 1,3 ****
--- 1,15 ----
Not comparable: </vds_dset> has rank 3, dimensions [5x18x8], max dimensions [18446744073709551615x18x8]
Warning: </vds_dset> or </vds_dset> is a virtual dataset
+ [1733071262.437780] [localhost:33263:0] tcp_iface.c:893 UCX ERROR scandir(/sys/class/net) failed: No such file or directory
+ [1733071262.468994] [localhost:33247:0] tcp_iface.c:893 UCX ERROR scandir(/sys/class/net) failed: No such file or directory
+ [1733071262.479911] [localhost:33242:0] tcp_iface.c:893 UCX ERROR scandir(/sys/class/net) failed: No such file or directory
Change-Id: I9c08d3c5375a2abd7d78344dfbef9b407828d1e0
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* gnu/packages/gnuzilla.scm (icedove): Update to 115.16.3.
Change-Id: I076e670a5442a910ac6d5aeb7ed8f64236442062
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* gnu/packages/mpi.scm (openmpi-5)[inputs]: Use inherited inputs to only
add ucx when it is supported.
[arguments]: Only add configure-flag for ucx when it is included as an
input.
Change-Id: I4a5fc86999ffbafdb99bd68c170fc7a1fa6a33a5
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* gnu/packages/mpi.scm (ucx): Update to 1.17.0.
[source]: Remove patch. Add snippet to add missing header.
[supported-systems]: Add riscv64-linux.
* gnu/packages/patches/ucx-tcp-iface-ioctl.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
Change-Id: I56db18f32ec0baa8439a31a1781763f318e8726e
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* gnu/packages/linux.scm (libfabric)[inputs]: Adjust if-supported
function to check the package-transitive-supported-systems.
Change-Id: I47d14b08906753d20f6f2a7ab4068a9e84319350
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* gnu/packages/linux.scm (cassini-headers)[supported-systems]: New field.
Change-Id: I44efa95de527099774abb57da78410c627fdc968
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* gnu/packages/wm.scm (scenefx): New variable.
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
Change-Id: Ia91747cbec59226a83a020b5fedbfd99886c35df
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* gnu/packages/games.scm (cataclysm-dda): Update to 0.H.
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
Change-Id: I8f3776b1bbb4ead2d409b2e1a3c4c98537126f12
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* gnu/packages/kde-plasma.scm (plasma-nm)[inputs]: Add
mobile-broadband-provider-info.
[arguments]: Stop replace 'check phase.
Change-Id: I82b220694e26b48f190c1c5d6609da39e955cc30
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* gnu/packages/gnome.scm (geoclue): Update to 2.7.2.
* gnu/packages/patches/geoclue-config.patch: Adjust.
Reviewed-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
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* gnu/packages/gimp.scm (gimp-next): Update to 3.0.0-RC1.
[inputs]: Add python-pygobject.
Reviewed-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
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* gnu/packages/gimp.scm (gegl): Update to 0.4.50.
Reviewed-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
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* gnu/packages/gimp.scm (babl): Update to 0.1.110.
Reviewed-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
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* gnu/packages/bioinformatics.scm (r-voltron)[inputs]: Add python,
python-numpy, python-pandas, python-anndata, python-h5py, python-natsort,
python-numcodecs, python-packaging, python-scipy, python-tifffile, and
python-zarr.
Change-Id: Iab137936550b51d6839d9beaa47f6102a8f3c355
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* gnu/packages/bioinformatics.scm (r-voltron): Update to 0.2.0-1.9f9415c.
[inputs]: Remove tbb.
[propagated-inputs]: Remove r-anndata, r-fastdummies, r-fnn, r-ggforce,
r-hdf5r, r-htmltools, r-interp, r-morpho, r-raster, r-s4vectors, r-scales,
r-terra, r-umap, and r-xml; add r-basilisk, r-ids, r-rann, r-rcdt,
r-rcppannoy, r-rcpparmadillo, r-reticulate, r-s4arrays, and r-sp.
[native-inputs]: Add r-testthat.
[description]: Update.
Change-Id: I8051ade560e03f8e3760560ec7b78d9941c00e08
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* gnu/packages/cran.scm (r-rcdt): New variable.
Change-Id: I83b00c95f2c3c6f82e9e9cf8f173ba087e1c29e0
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* gnu/packages/cran.scm (r-colorsgen): New variable.
Change-Id: I1acb2b0dd2661a5abdb59451522da6dffa85f470
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Tests regretion after update to the latest version as seen in CI log
<https://ci.guix.gnu.org/build/6720267/log/raw>.
* gnu/packages/astronomy.scm (imppg) [arguments]<test-flags>: Silent
tests on non x86_64 architectures, report upstream as well.
Change-Id: I875350ac60dc2f6a72eb1216a614d8943d41f9ed
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* gnu/packages/irc.scm (weechat)[source]: Use git-fetch.
Change-Id: I031d494db1b7c273bc87d0bdb21ee51c2c3ae10b
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* gnu/packages/irc.scm (weechat)[native-inputs]: Remove label.
[arguments]: Use G-expressions.
Change-Id: I08e2f4135760e61acbae915f045fb3838d965b25
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* gnu/packages/irc.scm (weechat): Update to 4.4.4.
Change-Id: I08c120df160c3ff7095f2418fe9f9553df3abe3c
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
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* gnu/packages/ftp.scm (lftp)[arguments]: Use G-expressions.
Change-Id: I504465e7604d9638442b063753a8cf8abf3616a9
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The updated information is sourced from the upstream repository at
GitHub: https://github.com/lavv17/lftp
* gnu/packages/ftp.scm (lftp): Update to 4.9.3.
[source]<origin>: Switch to git upstream.
[native-inputs]: Add autoconf, automake, gettext-minimal, bison, gnulib,
gperf, and libtool.
[arguments]<#:phases>: Add unpack-gnulib phase. Delete existing bootstrap
phase. Add new bootstrap phase to invoke it after patch-source-shebangs.
[home-page]: Update it.
Change-Id: I73771ed7e577da4bc82a8e74550eca83413dc8de
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
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* gnu/packages/version-control.scm (b4)[arguments]<#:phases>: Fix
phase 'hardcode-git-bin.
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
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* gnu/packages/wget.scm (wget2): Use G-expressions.
Change-Id: I8fbb5bab0746c5c98d2513fb31936ba56a8b7049
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* gnu/packages/bioinformatics.scm (pigx-scrnaseq): Update to 1.1.10.
[arguments]: Remove quasiquote.
Change-Id: I6cab358addfb376a878929bfb5041edc00cd336a
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* gnu/packages/bioinformatics.scm (pigx-bsseq): Update to 0.1.10.
[native-inputs]: Use tzdata-for-tests instead of tzdata.
[arguments]: Remove quasiquote.
Change-Id: I680b08cda788fc03a8bedb87f241116a051798d6
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* gnu/packages/golang-xyz.scm (go-jqp): New variable.
Change-Id: I736e039a456960e0e5864d7d197b2a6a823bbe58
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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* gnu/packages/golang.scm (go-github-com-charmbracelet-bubbletea): Update to 1.2.3.
[propagated-inputs]: Add go-github-com-muesli-ansi,
go-github-com-muesli-cancelreader, go-github-com-charmbracelet-lipgloss,
go-github-com-charmbracelet-x-term, go-github-com-charmbracelet-x-ansi, and
go-golang-org-x-sync. Sort inputs alphabetically.
[arguments] <phases>: Fix tests that are failing due to newer version of
"go-github-com-charmbracelet-x-ansi" package.
Change-Id: Ifdb3074f342b34c07c0e7ab47341b159d1eea0c2
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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* gnu/packages/web.scm (gojq) [arguments]<import-path>: Provide path to
the command source.
<unpack-path>: Set to "github.com/itchyny/gojq".
Change-Id: I6a4d0cbdba385460d7ab43d62fe1897922a7c7e9
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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* gnu/packages/web.scm (go-github-com-itchyny-gojq): Install the library
files instead of "gojq" binary.
[arguments]: Remove <unpack-path>, adjust <import-path>.
Change-Id: I72235e0cfeee81b0e7490ebd9d92d0d36ceb1844
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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* gnu/packages/golang-xyz.scm (go-github-com-muesli-ansi): New variable.
Change-Id: I3dbbd8af04373997fcb3c60872dff14ab1b2b76a
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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* gnu/packages/golang-xyz.scm (go-github-com-charmbracelet-bubbles): New variable.
Change-Id: I090db91509590ca9a8cab1a209d00bcc12b524e7
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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* gnu/packages/golang-xyz.scm (go-github-com-charmbracelet-lipgloss): New variable.
Change-Id: I73050c96830025ed63be7567873f8faf7573453d
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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* gnu/packages/golang-xyz.scm (go-github-com-charmbracelet-x-term): New variable.
Change-Id: I854febc3a3010f39051ee6fbd4a159993043d41e
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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* gnu/packages/golang-xyz.scm (go-github-com-charmbracelet-x-exp-golden): New variable.
Change-Id: I7fa815433d9a83e4562bdc769312dd05e0a298da
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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* gnu/packages/golang-xyz.scm (go-github-com-charmbracelet-x-ansi): New variable.
Change-Id: I1451ae9953bc87475413b83bb636a2df14ddc70c
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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* gnu/packages/golang-xyz.scm (go-github-com-sahilm-fuzzy): New variable.
Change-Id: Iebf4f8c3848e1e08b2860ac69a5a8d816ac260df
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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* gnu/packages/golang.scm (go-github-com-kylelemons-godebug-pretty): New variable.
Change-Id: Icd7d5fd70cf56d1ca74e9a2cfb929a3344128ba7
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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* gnu/packages/golang-xyz.scm (go-github-com-makenowjust-heredoc): New variable.
Change-Id: I686dfd6a798da764b004a53a562ca788e70f8cd5
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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* gnu/packages/golang-xyz.scm (go-github-com-aymanbagabas-go-udiff): New variable.
Change-Id: Icac934589b041c9b3b5db0114173d25d0c3f4c34
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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* gnu/packages/golang-xyz.scm (go-github-com-atotto-clipboard): New variable.
Change-Id: I4a871983f564034045f4b2ba77f2453cfce5cb2b
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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* gnu/packages/rdesktop.scm (xrdp)[native-inputs]: Only include nasm on
platforms which need it.
Change-Id: I9f390af3c12752bc0c3696910170bc994b8a5fd6
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* gnu/packages/rdesktop.scm (xorgxrdp)[native-inputs]: Only include nasm
on platforms which need it.
Change-Id: I00778cf4b53776754525d42e0586076d4f2be61b
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* gnu/packages/golang.scm (go-github-com-arceliar-phony): Move from here...
* gnu/packages/golang-xyz.scm: ...to here.
Change-Id: Ia50f331f23326fa8ae6e12b410c12d06cb369bf7
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* gnu/packages/golang.scm (go-github-com-arceliar-ironwood): Move from here...
* gnu/packages/golang-web.scm: ...to here.
Change-Id: I6ae9084a88ffe0b7cb2d21234c246399e3e0f088
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