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* gnu: Add suitesparse-config.David Elsing2023-10-06
| | | | | | | | | | The suitesparse-source variable contains the entire SuiteSparse source code, which is used for all subpackages. * gnu/packages/maths.scm (suitesparse-version, suitesparse-source, suitesparse-config): New variables. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: suitesparse: Tweak description.David Elsing2023-10-06
| | | | | | | * gnu/packages/maths.scm (suitesparse)[description]: Mention that all subpackages are included. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: guix: Update to e863274.Ludovic Courtès2023-10-06
| | | | | | | This includes the ‘guix perform-download’ fix from commit 762fdbdef52b4c17df578478cadc8655d56171a4. * gnu/packages/package-management.scm (guix): Update to e863274.
* gnu: Add vendor-reset-linux-module.Lars Rustand2023-10-06
| | | | | | * gnu/packages/linux.scm (vendor-reset-linux-module): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
* gnu: matterbridge: Update to 1.26.0Denis 'GNUtoo' Carikli2023-10-06
| | | | | | | * gnu/packages/messaging.scm (matterbridge): Update to 1.26.0 Signed-off-by: Denis 'GNUtoo' Carikli <GNUtoo@cyberdimension.org> Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
* gnu: Add python-mapie.Vinicius Monego2023-10-06
| | | | | | * gnu/packages/statistics.scm (python-mapie): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
* system: Modify bash skeleton to colorize 'ip' output.Bruno Victal2023-10-06
| | | | | | | * gnu/system/shadow.scm (%default-bashrc): Add an alias for 'ip' that enables output colorization. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
* gnu: r-biomvrcns: Patch R constants.Ricardo Wurmus2023-10-06
| | | | | * gnu/packages/bioconductor.scm (r-biomvrcns)[arguments]: Add phase 'patch-constants.
* services: hurd-vm: Leave root password uninitialized when offloading.Ludovic Courtès2023-10-05
| | | | | | | | | | | | | Starting with 953c65ffdd43c02c934518fb7a1c68542584b223, offloading to the Hurd VM would be enabled by default. However, ‘root’ had an empty password so any user on the host could connect to the VM over VNC, log in as root, and potentially populate the host’s store from there. This change fixes that. * gnu/services/virtualization.scm (operating-system-with-locked-root-account): New procedure. (hurd-vm-disk-image)[transform]: Add ‘operating-system-with-locked-root-account’ when offloading.
* tests: childhurd: Test SSH connection with a non-root user.Ludovic Courtès2023-10-05
| | | | | | | * gnu/tests/virtualization.scm (%childhurd-os): Remove ‘services’ and add ‘users’ to the GNU/Hurd ‘operating-system’ declaration. (run-childhurd-test)[run-command-over-ssh]: Log in as “test” instead of “root”.
* services: mcron: Hide ‘mkdir-p’ from (shepherd support).Ludovic Courtès2023-10-05
| | | | | | | | This a avoids a Guile warning about the name collision with (guix build utils). The warning was introduced by commit e0e85f2b2396c69d078caad9bd8e1a0fddf33a4a. * gnu/services/mcron.scm (mcron-shepherd-services): Hide ‘mkdir-p’.
* gnu: guile-ini: Added missing propagated input ‘guile-lib’.Fabio Natali2023-10-05
| | | | | | | | | Fixes <https://issues.guix.gnu.org/66315>. * gnu/packages/guile-xyz.scm (guile-ini)[propagated-inputs]: Add GUILE-LIB. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: prosody: Update to 0.12.4.André Batista2023-10-05
| | | | | | * gnu/packages/messaging.scm (prosody): Update to 0.12.4. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: go-ipfs: Update to 0.14.0.Artyom V. Poptsov2023-10-05
| | | | | | | | * gnu/packages/ipfs.scm (go-ipfs): Update to 0.14.0. [source]: Change "go-ipfs" to "kubo" in the source link. [arguments]: Rename "go-ipfs" to "kubo". Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* doc: Fix channel name typo.Nikolaos Chatzikonstantinou2023-10-05
| | | | | | | | | | | | | | | | | | | | | When the manual has "variant-personal-packages", it actually refers to the channel "variant-packages", as it is named so elsewhere. To correct this, I ran the command grep -r -l variant-personal-packages | xargs \ sed -i 's/variang-personal-packages/variant-packages/g' * doc/guix.texi (Specifying Additional Channels): Fix channel name typo. * po/doc/guix-manual.de.po: Fix channel name typo. * po/doc/guix-manual.es.po: Fix channel name typo. * po/doc/guix-manual.fr.po: Fix channel name typo. * po/doc/guix-manual.pt_BR.po: Fix channel name typo. * po/doc/guix-manual.ru.po: Fix channel name typo. * po/doc/guix-manual.zh_CN.po: Fix channel name typo. Signed-off-by: Nikolaos Chatzikonstantinou <nchatz314@gmail.com> Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* system: bare-bones: Add comments about nss-cert and NTP service.Nikolaos Chatzikonstantinou2023-10-05
| | | | | | | | | | | | TLS errors may be confusing to some users. Two comments are added: one comment should help clarify the extra step required for root CA certificates to be installed, while the other will help users keep their clocks synchronized, another source of TLS errors due to clock drift. * gnu/system/examples/bare-bones.tmpl: Add nss-cert and NTP service comments. Signed-off-by: Nikolaos Chatzikonstantinou <nchatz314@gmail.com> Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* doc: Suggest keeping record type descriptors private.Ludovic Courtès2023-10-05
| | | | | | | * doc/contributing.texi (Data Types and Pattern Matching): Add paragraph about keeping RTDs private. Suggested-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* Revert "system: accounts: Export <user-account>."Ludovic Courtès2023-10-05
| | | | | This reverts commit 03795e2ba27424fc98957da00f6c71325e7ae425. Fixes <https://issues.guix.gnu.org/66279>.
* gnu: Add apple-bash.B. Wilson2023-10-05
| | | | | | | * gnu/packages/apple.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODELS): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* perform-download: Set PATH before invoking ‘git’.Ludovic Courtès2023-10-05
| | | | | | | | Fixes <https://issues.guix.gnu.org/66305>. Reported by Guillaume Le Vaillant <glv@posteo.net>. * guix/scripts/perform-download.scm (perform-git-download): Add call to ‘setenv’.
* gnu: rust-trybuild: Update 1.0.19 version hash.Distopico2023-10-05
| | | | | | | | Fixes <https://issues.guix.gnu.org/66345>. * gnu/packages/crates-io.scm (rust-trybuild): Update 1.0.19 hash. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* doc: Update bug-reference configuration snippet.Mekeor Melire2023-10-05
| | | | | | | | | * doc/contributing.texi (The Perfect Setup) <Viewing Bugs within Emacs>: Make bug-reference-bug-regexp match more URLs based on issues.guix.gnu.org. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Suggested-by: Simon Tournier <zimon.toutoune@gmail.com>
* gnu: Add cgit-pink.Arun Isaac2023-10-05
| | | | * gnu/packages/version-control.scm (cgit-pink): New variable.
* gnu: cgit: Fix cross compilation.Arun Isaac2023-10-05
| | | | | | | * gnu/packages/version-control.scm (cgit)[native-inputs]: Move bzip2, gzip and xz to ... [inputs]: ... here. Add bash-minimal. [arguments]: Use cc-for-target.
* gnu: cgit: Update package style.Arun Isaac2023-10-05
| | | | | * gnu/packages/version-control.scm (cgit)[arguments]: Rewrite using G-expressions. Do not return #t from custom phases.
* gnu: python-pynetbox: Update to 7.2.0.Mathieu Othacehe2023-10-05
| | | | * gnu/packages/python-web.scm (python-pynetbox): Update to 7.2.0.
* gnu: Add python-pynetbox.Timotej Lazar2023-10-05
| | | | | | * gnu/packages/python-web.scm (python-pynetbox): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
* gnu: Add WCSTools.Sharlatan Hellseher2023-10-05
| | | | | | | | * gnu/packages/astronomy.scm (wcstools): New variable. * gnu/packages/patches/wcstools-extend-makefiles.patch: New file. * gnu/local.mk: Add it. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
* gnu: r-bayesfactor: Update to 0.9.12-4.5.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/statistics.scm (r-bayesfactor): Update to 0.9.12-4.5.
* gnu: r-puniform: Update to 0.2.7.Ricardo Wurmus2023-10-05
| | | | | * gnu/packages/statistics.scm (r-puniform): Update to 0.2.7. [propagated-inputs]: Add r-numderiv.
* gnu: r-lubridate: Update to 1.9.3.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/statistics.scm (r-lubridate): Update to 1.9.3.
* gnu: r-vgam: Update to 1.1-9.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/statistics.scm (r-vgam): Update to 1.1-9.
* gnu: r-rmarkdown: Update to 2.25.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/statistics.scm (r-rmarkdown): Update to 2.25.
* gnu: r-withr: Update to 2.5.1.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/statistics.scm (r-withr): Update to 2.5.1.
* gnu: r-openssl: Update to 2.1.1.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/statistics.scm (r-openssl): Update to 2.1.1.
* gnu: r-dbplyr: Update to 2.3.4.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/statistics.scm (r-dbplyr): Update to 2.3.4.
* gnu: r-markdown: Update to 1.9.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/statistics.scm (r-markdown): Update to 1.9.
* gnu: r-evaluate: Update to 0.22.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/statistics.scm (r-evaluate): Update to 0.22.
* gnu: r-plyr: Update to 1.8.9.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/statistics.scm (r-plyr): Update to 1.8.9.
* gnu: r-matrix: Update to 1.6-1.1.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/statistics.scm (r-matrix): Update to 1.6-1.1.
* gnu: r-lattice: Update to 0.21-9.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/statistics.scm (r-lattice): Update to 0.21-9.
* gnu: r-varhandle: Update to 2.0.6.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/cran.scm (r-varhandle): Update to 2.0.6.
* gnu: r-mockery: Update to 0.4.4.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/cran.scm (r-mockery): Update to 0.4.4.
* gnu: r-paws: Update to 0.4.0.Ricardo Wurmus2023-10-05
| | | | | * gnu/packages/cran.scm (r-paws): Update to 0.4.0. [propagated-inputs]: Add r-paws-common.
* gnu: r-paws-common: Update to 0.6.1.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/cran.scm (r-paws-common): Update to 0.6.1.
* gnu: r-tensorflow: Update to 2.14.0.Ricardo Wurmus2023-10-05
| | | | | * gnu/packages/cran.scm (r-tensorflow): Update to 2.14.0. [propagated-inputs]: Add r-lifecycle.
* gnu: r-exactextractr: Update to 0.10.0.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/cran.scm (r-exactextractr): Update to 0.10.0.
* gnu: r-protolite: Update to 2.3.0.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/cran.scm (r-protolite): Update to 2.3.0.
* gnu: r-vroom: Update to 1.6.4.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/cran.scm (r-vroom): Update to 1.6.4.
* gnu: r-delaporte: Update to 8.3.0.Ricardo Wurmus2023-10-05
| | | | * gnu/packages/cran.scm (r-delaporte): Update to 8.3.0.
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