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* services: cuirass: Depend on ‘user-processes’.Ludovic Courtès2024-01-24
| | | | | | | | * gnu/services/cuirass.scm (cuirass-shepherd-service) (cuirass-remote-worker-shepherd-service): Add ‘user-processes’ to the ‘requirement’ field. Change-Id: Iba087bfd8aaa9b1ef54bcc77d855adc136e18644
* services: cuirass: Add ‘configuration’ action.Ludovic Courtès2024-01-24
| | | | | | | * gnu/services/cuirass.scm (cuirass-shepherd-service): Add ‘actions’ field to ‘cuirass’ Shepherd service. Change-Id: I7feaeebcb89fcd9a1fdbc63f0337e0d63b697793
* gnu: libnova: Use G-Expressions.Sharlatan Hellseher2024-01-24
| | | | | | | | * gnu/packages/astronomy.scm (libnova): Adjust package style by applying G-Expressions and fix indention. [arguments]<#:phases>: Remove trailing #f from lambda. Change-Id: I63d239464fd3cb166449ef8904b5fd72326cb853
* gnu: stackistry: Use G-Expressions.Sharlatan Hellseher2024-01-24
| | | | | | | | | * gnu/packages/astronomy.scm (stackistry): Update package style by using G-Expressions. Apply indention. [arguments]<#:tests?>: Use it instead of deleting check phase. <#:phases>: Remove trailing #f from each lambda. Change-Id: I30f3906719713f0d47dc2049564bc2691ba3cd5d
* gnu: libpasastro: Use G-Expressions.Sharlatan Hellseher2024-01-24
| | | | | | | | | * gnu/packages/astronomy.scm (libpasastro): [supported-systems]: Add it. [arguments]: Rewrite using G-expressions. [description]: Remove trailing \n. Change-Id: Ic0e79394be1110566f5481963fdd167985c1a770
* gnu: python-stsynphot: Fix build.Sharlatan Hellseher2024-01-24
| | | | | | | * gnu/packages/astronomy.scm (python-stsynphot): Fix build. [native-inputs]: Add python-semantic-version. Change-Id: I72b086c6a0461293c2191e39e25b3c803279bf60
* gnu: python-skyfield: Update to 1.47.Sharlatan Hellseher2024-01-24
| | | | | | | | * gnu/packages/astronomy.scm (python-skyfield): Update to 1.47. [inputs]: Remove python-certifi, python-jplephem, python-numpy, and python-sgp4. [propagated-inputs]: Add python-certifi, python-jplephem, python-numpy, and python-sgp4. Change-Id: If5a9a47077edcebe83449c4c54a49189dea61c5a
* gnu: python-tweakwcs: Update to 0.8.6.Sharlatan Hellseher2024-01-24
| | | | | | * gnu/packages/astronomy.scm (python-tweakwcs): Update to 0.8.6. Change-Id: Icfbb7680a5e208d68f5b8da3fa3fdd35a358ecf5
* gnu: python-synphot: Enable more options.Sharlatan Hellseher2024-01-24
| | | | | | | | * gnu/packages/astronomy.scm (python-synphot) [propagated-inputs]: Add python-dust-extinction and python-specutils. Sort alphabetically. [native-inputs]: Add python-semantic-version. Change-Id: If4dbcf2765508d7c7e2b7580193367ed2d038b6f
* gnu: Add python-specutils.Sharlatan Hellseher2024-01-24
| | | | | | * gnu/packages/astronomy.scm (python-specutils): New variable. Change-Id: Ic2ee65eb8a6fb7e5fe0d0d086541d47eef8bd1ad
* gnu: Add python-dust-extinction.Sharlatan Hellseher2024-01-24
| | | | | | * gnu/packages/astronomy.scm (python-dust-extinction): New variable. Change-Id: I6fecfede0c347d032555b8f81bcf4f7072fc1129
* gnu: Add python-ndcube.Sharlatan Hellseher2024-01-24
| | | | | | * gnu/packages/astronomy.scm (python-ndcube): New variable. Change-Id: I94087c7e02ca678531bcbf4eb3d035e2647768fd
* gnu: python-sunpy: Update to 5.1.1.Sharlatan Hellseher2024-01-24
| | | | | | | | | | * gnu/packages/astronomy.scm (python-sunpy): Update to 5.1.1. [arguments]<#:test-flags>: Ignore test_spice.py as SpicePy is not packed yet and python-spicepy is optional. <#:phases>{prepare-test-environment}: Add pytest.ini configuration file to fix tests. Change-Id: Icfb05ce29b376a05291e9f7020170e389d0081d2
* gnu: python-stcal: Update to 1.5.2.Sharlatan Hellseher2024-01-24
| | | | | | | | * gnu/packages/astronomy.scm (python-stcal): Update to 1.5.2. [propagated-inputs]: Add python-asdf-3.0 and python-gwcs. [native-inputs]: Remove python-cython; add python-cython-3 and python-semantic-version. Change-Id: I8b6a90a3c0b75ee43de4c7069950a4f9578ea825
* gnu: python-pyvo: Update to 1.5.Sharlatan Hellseher2024-01-24
| | | | | | | * gnu/packages/astronomy.scm (python-pyvo): Update to 1.5. [propagated-inputs]: Remove python-mimeparse. Change-Id: I4d3e19b95c034cf3c82cec55a198d9a927934971
* gnu: python-drms: Update to 0.7.1.Sharlatan Hellseher2024-01-24
| | | | | | * gnu/packages/astronomy.scm (python-drms): Update to 0.7.1. Change-Id: I3744efa8c87db7fcb743bf8dca4ec6a437a82951
* gnu: python-crds: Update to 11.17.14.Sharlatan Hellseher2024-01-24
| | | | | | | * gnu/packages/astronomy.scm (python-crds): Update to 11.17.14. [description]: Indent it and apply TexInfo style on URLs. Change-Id: Icd298578cf685cfbc454d5b16b9f89c6d050b93a
* gnu: libxisf: Update to 0.2.11.Sharlatan Hellseher2024-01-24
| | | | | | * gnu/packages/astronomy.scm (libxisf): Update to 0.2.11. Change-Id: I79242d42af3db660c46be0baf05e11ea7ac680f7
* gnu: gpredict: Update home-page and description.Sharlatan Hellseher2024-01-24
| | | | | | | | * gnu/packages/astronomy.scm (gpredict)[home-page]: Update it according to project's README. [description]: Add feature detailed list. Change-Id: If5edc6e50796c7753ac47fac082c267145723361
* gnu: indi-2.0: Update to 2.0.5.Sharlatan Hellseher2024-01-24
| | | | | | * gnu/packages/astronomy.scm (indi-2.0): Update to 2.0.5. Change-Id: I9cea7e7d11af5a142066f11a2185eb826570afb5
* gnu: stellarium: Update to 23.4.Sharlatan Hellseher2024-01-24
| | | | | | | * gnu/packages/astronomy.scm (stellarium): Update to 23.4. [inputs]: Add nlopt. Change-Id: Id205ad84ff75a687f6c1fdababcf3040c0c55abd
* gnu: python-pytorch-geometric: Disable one test.Ricardo Wurmus2024-01-24
| | | | | | | * gnu/packages/machine-learning.scm (python-pytorch-geometric)[arguments]: Disable test_gdc as it occasionally fails. Change-Id: I9d1dc1b68628801ea1bb5a8bdfa17063990748ea
* gnu: libdispatch: Update to 5.9.2.Efraim Flashner2024-01-24
| | | | | | * gnu/packages/c.scm (libdispatch): Update to 5.9.2. Change-Id: I119d1de974673aa2c08eb51a7bcaa7ce24aeb0b2
* gnu: range-v3: Update to 0.12.0.Efraim Flashner2024-01-24
| | | | | | | | | * gnu/packages/cpp.scm (range-v3): Update to 0.12.0. [source]: Remove patch. * gnu/packages/patches/range-v3-build-with-gcc10.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Change-Id: I078937f9aff0da31ede8d472d8739e48bb775c55
* gnu: range-v3: Format with 'guix style'.Efraim Flashner2024-01-24
| | | | | | * gnu/packages/cpp.scm (range-v3): Format with 'guix style'. Change-Id: I249443e5e5d0f7ef49e33de4f140246a862101d2
* gnu: range-v3: Build with newer gcc.Efraim Flashner2024-01-24
| | | | | | * gnu/packages/cpp.scm (range-v3)[native-inputs]: Remove gcc-9. Change-Id: I0411d5db3e3df15c6df0a9a010d311fe1c80015c
* gnu: python-xgboost: Fix build.Ricardo Wurmus2024-01-24
| | | | | | | | | * gnu/packages/machine-learning.scm (python-xgboost)[build-system]: Use pyproject-build-system. [arguments]: Move test flags to #:test-flags; disable a few more tests, mostly to account for a removed dataset; use G-expression; remove custom 'check phase. Change-Id: I6841a8c159919df85acaa8558248a8775ec5be80
* gnu: webkitgtk: Update to 2.42.4 [fixes CVE-2023-42883].Andre A. Gomes2024-01-24
| | | | | | * gnu/packages/webkit.scm (webkitgtk): Update to 2.42.4. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: emacs-yasnippet: Update to 0.14.0-0.297546f.Maxim Cournoyer2024-01-24
| | | | | | | | | * gnu/packages/emacs-xyz.scm (emacs-yasnippet): Update to 0.14.0-0.297546f. Remove fix-tests patch. * gnu/packages/patches/emacs-yasnippet-fix-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): De-register it. Change-Id: I3fda2bb3d879d88f06f9d814b6c8d835d9eafc9f
* gitconfig: b4: Automatically add 'Signed-off-by' when applying patches.Maxim Cournoyer2024-01-24
| | | | | | | | Also use --3way to ease conflict resolutions. * etc/git/gitconfig [b4]: Add shazam-am-flags option. Change-Id: I6a92909a5b23a8680c16251aafa084b9a48944ea
* gnu: Add python-pytorch-geometric.Ricardo Wurmus2024-01-24
| | | | | | * gnu/packages/machine-learning.scm (python-pytorch-geometric): New variable. Change-Id: I9a016cda7d167159437724a878e6512c37106fea
* gnu: singular: Update to 4.3.2p10.Andreas Enge2024-01-24
| | | | | | * gnu/packages/algebra.scm (singular): Update to 4.3.2p10. Change-Id: I196d31e3f5605dd51385146ce091d63a4e9eb340
* gnu: Add r-papaja.Ricardo Wurmus2024-01-24
| | | | | | | * gnu/packages/cran.scm (r-papaja): New variable. Co-authored-by: Lars-Dominik Braun <lars@6xq.net> Change-Id: Ib5b3a6ff8d52052cf135b2ba36cad3ce295ed6d4
* gnu: Add r-tinylabels.Ricardo Wurmus2024-01-24
| | | | | | * gnu/packages/cran.scm (r-tinylabels): New variable. Change-Id: Ie86de4daaf132cd32f896573be747f35e725258e
* gnu: Add r-rmdfiltr.Ricardo Wurmus2024-01-24
| | | | | | * gnu/packages/cran.scm (r-rmdfiltr): New variable. Change-Id: I59b92e9364ca4e74a98b80b6cca1a883ab3caec3
* gnu: python-chaospy: Ignore deprecation warnings.Ricardo Wurmus2024-01-24
| | | | | | | * gnu/packages/statistics.scm (python-chaospy)[arguments]: Add phase 'dont-treat-deprecation-warnings-as-error. Change-Id: Id06404f9e47f7084fefc2e72032882d49e5b546b
* gnu: pynac: Update to 0.7.29.Andreas Enge2024-01-24
| | | | | | * gnu/packages/sagemath.scm (pynac): Update to 0.7.29. Change-Id: I3bf2675aea9d8a07fdcfa08471c9d1ca7725e1f7
* teams: Remove Efraim Flashner from the science team.Efraim Flashner2024-01-24
| | | | | | * etc/teams.scm (Efraim Flashner): Remove science team. Change-Id: I790fe329cde11fcb4b706b01b9aa59ad29d8c874
* gnu: python-pyts: Update to 0.13.0.Ricardo Wurmus2024-01-24
| | | | | | | | | * gnu/packages/python-science.scm (python-pyts): Update to 0.13.0. [build-system]: Use pyproject-build-system. [arguments]: Remove custom 'check phase; enable all tests. [propagated-inputs]: Remove python-matplotlib. Change-Id: Iafcc047d8bb14e1eef514fd92aa53f8fda38eab0
* gnu: python-scikit-learn-extra: Update to 0.3.0-1.0f95d8d.Ricardo Wurmus2024-01-24
| | | | | | | | | * gnu/packages/machine-learning.scm (python-scikit-learn-extra): Update to 0.3.0-1.0f95d8d. [arguments]: Move test flags out of 'check phase and to #:test-flags. [propagated-inputs]: Add python-packaging. Change-Id: I4081a9364a0646d0c6960a3d155315e8eff8af59
* gnu: nyxt: Update to 3.11.1.Andre A. Gomes2024-01-24
| | | | | | | | | | | * gnu/packages/web-browsers.scm (nyxt): Update to 3.11.1. [inputs]: Remove sbcl-fset and sbcl-mk-string-metrics. Add gst-libav, gst-plugins-bad, gst-plugins-base, gst-plugins-good, gst-plugins-ugly. [arguments]: Update 'configure-tests' phase. [home-page]: Update URL. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Change-Id: If35d6f0153339b311057bea05562fefb215c3f0d
* gnu: cl-lass: Update to 0.6.0-1.1f2418d.Andre A. Gomes2024-01-24
| | | | | | | * gnu/packages/lisp-xyz.scm (sbcl-lass): Update to 0.6.0-1.1f2418d. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Change-Id: I51dfe84b9194b4d94d76502ffd47f88cbc1583fb
* gnu: python-pydicom: Update to 2.4.4.Sharlatan Hellseher2024-01-23
| | | | | | * gnu/packages/python-science.scm (python-pydicom): Update to 2.4.4. Change-Id: I996115fb3bdf0bd61d2b2dcdb2500b31ce104597
* gnu: python-pydicom: Simplify package style.Sharlatan Hellseher2024-01-23
| | | | | | | | * gnu/packages/python-science.scm (python-pydicom)[build-system]: Swap to pyproject-build-system. [description]: Simplify wording, indent. Change-Id: I7ef413ea2da6cbb83eb33424c559f7ac5ed549cb
* gnu: python-pynetdicom: Simplify package style.Sharlatan Hellseher2024-01-23
| | | | | | | | * gnu/package/python-science.scm (python-pynetdicom)[build-system]: Swap to pyproject-build-system. [description]: Simplify wording, indent. Change-Id: If4e80d06edb0080685d0695f30abc2f9db669f45
* gnu: Add python-pynetdicom.Antero Mejr2024-01-23
| | | | | | * gnu/packages/python-science.scm (python-pynetdicom): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
* gnu: Add flash.Ricardo Wurmus2024-01-23
| | | | | | * gnu/packages/bioinformatics.scm (flash): New variable. Change-Id: Id657ba7850031ad24b4333b6bc79401511e00a85
* gnu: Add isolator.Ricardo Wurmus2024-01-23
| | | | | | * gnu/packages/bioinformatics.scm (isolator): New variable. Change-Id: I950baca5b6898576f358b3364b1fe541b3333298
* ci: Don't cross compile to or1k-elf.Mathieu Othacehe2024-01-23
| | | | | | | * gnu/ci.scm (cross-jobs)[pointless?]: Don't build any packages for or1k-elf. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Change-Id: I294429d5318b94fb8e7780a37f3608b5321cf6ca
* gnu: Add metal.Ricardo Wurmus2024-01-23
| | | | | | * gnu/packages/bioinformatics.scm (metal): New variable. Change-Id: I70fd30c18303f61a9f6720e70d4b4e57140a7140